Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10570
(705 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 157 5e-39
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 157 5e-39
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 157 5e-39
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 157 5e-39
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 153 1e-37
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 153 1e-37
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 152 2e-37
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 152 2e-37
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 140 8e-34
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 133 9e-32
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 125 2e-29
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 118 3e-27
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 88 6e-18
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 79 2e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 66 3e-11
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 63 2e-10
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 49 3e-06
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 47 1e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 2e-04
At5g43500.2 68418.m05318 expressed protein 31 0.56
At5g43500.1 68418.m05319 expressed protein 31 0.56
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 31 0.56
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 31 0.98
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 30 1.3
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 30 1.3
At1g20950.1 68414.m02623 pyrophosphate--fructose-6-phosphate 1-p... 30 1.3
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 29 2.3
At4g24175.1 68417.m03469 expressed protein 29 4.0
At4g00750.1 68417.m00102 dehydration-responsive family protein s... 29 4.0
At2g39440.1 68415.m04841 expressed protein 29 4.0
At2g42760.1 68415.m05295 expressed protein 28 5.2
At1g63930.1 68414.m07238 expressed protein ; expression supporte... 28 6.9
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 157 bits (382), Expect = 5e-39
Identities = 72/83 (86%), Positives = 78/83 (93%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWISK EYDESGPSIVHRKCF
Sbjct: 355 QQMWISKSEYDESGPSIVHRKCF 377
Score = 123 bits (296), Expect = 1e-28
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = -2
Query: 701 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 522
SSSS+EK+YELPDGQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRK
Sbjct: 234 SSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRK 293
Query: 521 DLY 513
DLY
Sbjct: 294 DLY 296
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 157 bits (382), Expect = 5e-39
Identities = 72/83 (86%), Positives = 78/83 (93%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWI+K EYDESGPSIVHRKCF
Sbjct: 355 QQMWIAKAEYDESGPSIVHRKCF 377
Score = 120 bits (290), Expect = 7e-28
Identities = 53/63 (84%), Positives = 59/63 (93%)
Frame = -2
Query: 701 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 522
+SSS+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRK 293
Query: 521 DLY 513
DLY
Sbjct: 294 DLY 296
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 157 bits (382), Expect = 5e-39
Identities = 72/83 (86%), Positives = 78/83 (93%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWI+K EYDESGPSIVHRKCF
Sbjct: 355 QQMWIAKAEYDESGPSIVHRKCF 377
Score = 124 bits (300), Expect = 4e-29
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = -2
Query: 701 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 522
+SSS+EKSYELPDGQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRK 293
Query: 521 DLY 513
DLY
Sbjct: 294 DLY 296
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 157 bits (382), Expect = 5e-39
Identities = 72/83 (86%), Positives = 78/83 (93%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWI+K EYDESGPSIVHRKCF
Sbjct: 355 QQMWIAKAEYDESGPSIVHRKCF 377
Score = 120 bits (290), Expect = 7e-28
Identities = 53/63 (84%), Positives = 59/63 (93%)
Frame = -2
Query: 701 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 522
+SSS+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRK 293
Query: 521 DLY 513
DLY
Sbjct: 294 DLY 296
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 153 bits (370), Expect = 1e-37
Identities = 70/83 (84%), Positives = 76/83 (91%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWISK EYDE+GP IVHRKCF
Sbjct: 355 QQMWISKAEYDEAGPGIVHRKCF 377
Score = 125 bits (302), Expect = 2e-29
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = -2
Query: 701 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 522
+SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRK 293
Query: 521 DLY 513
DLY
Sbjct: 294 DLY 296
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 153 bits (370), Expect = 1e-37
Identities = 70/83 (84%), Positives = 76/83 (91%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWISK EYDE+GP IVHRKCF
Sbjct: 355 QQMWISKAEYDEAGPGIVHRKCF 377
Score = 125 bits (302), Expect = 2e-29
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = -2
Query: 701 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 522
+SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRK 293
Query: 521 DLY 513
DLY
Sbjct: 294 DLY 296
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 152 bits (369), Expect = 2e-37
Identities = 70/83 (84%), Positives = 76/83 (91%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWI+K EYDESGPSIVHRKCF
Sbjct: 355 QQMWIAKAEYDESGPSIVHRKCF 377
Score = 119 bits (286), Expect = 2e-27
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = -2
Query: 701 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 522
+SSS+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRK 293
Query: 521 DLY 513
DLY
Sbjct: 294 DLY 296
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 152 bits (369), Expect = 2e-37
Identities = 70/83 (84%), Positives = 76/83 (91%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
QQMWI+K EYDESGPSIVHRKCF
Sbjct: 355 QQMWIAKAEYDESGPSIVHRKCF 377
Score = 119 bits (286), Expect = 2e-27
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = -2
Query: 701 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 522
+SSS+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRK 293
Query: 521 DLY 513
DLY
Sbjct: 294 DLY 296
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 140 bits (339), Expect = 8e-34
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGGTTM+PGIADRM KEI ALAP +MKIK++APPERKYSVW+GGSILASLS+F
Sbjct: 296 LYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSF 355
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
MWI+K EYDE G +IVHRKCF
Sbjct: 356 APMWITKAEYDEQGGAIVHRKCF 378
Score = 114 bits (275), Expect = 5e-26
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = -2
Query: 701 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 522
+SS+++++YELPDGQVITIG ERFRCPE LFQ S +GME GIHETTYNSIMKCDVDIRK
Sbjct: 235 TSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRK 294
Query: 521 DLY 513
DLY
Sbjct: 295 DLY 297
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 133 bits (322), Expect = 9e-32
Identities = 60/83 (72%), Positives = 72/83 (86%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGGTTM+ GI +RM KEI ALA + M+IKI+APPERKYSVWIGGSILASLST+
Sbjct: 247 LYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTY 306
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
+QMWI+K EY+E+GP+IVH KCF
Sbjct: 307 EQMWITKAEYEENGPAIVHTKCF 329
Score = 112 bits (269), Expect = 2e-25
Identities = 49/62 (79%), Positives = 55/62 (88%)
Frame = -2
Query: 698 SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKD 519
SS+++++YELPDGQVITIG ERFRCPE LFQPS +GME GIHE TYNSIMKCD DIRKD
Sbjct: 187 SSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKD 246
Query: 518 LY 513
LY
Sbjct: 247 LY 248
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 125 bits (302), Expect = 2e-29
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = -2
Query: 701 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRK 522
+SSS+EK+YELPDGQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRK
Sbjct: 234 TSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRK 293
Query: 521 DLY 513
DLY
Sbjct: 294 DLY 296
Score = 111 bits (267), Expect = 4e-25
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 339 QQMWISK 319
QQ+ I +
Sbjct: 355 QQVKIDQ 361
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 118 bits (285), Expect = 3e-27
Identities = 51/77 (66%), Positives = 64/77 (83%)
Frame = -1
Query: 504 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 325
+++GGTTM GI +RM KE+ AL PS+MK+K++ PPE + SVWIGGSILASLSTF QMWI
Sbjct: 289 LMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWI 348
Query: 324 SKQEYDESGPSIVHRKC 274
+K EY+E G +IVHRKC
Sbjct: 349 TKDEYEEHGAAIVHRKC 365
Score = 88.6 bits (210), Expect = 4e-18
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = -2
Query: 692 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLY 513
+++K+Y LPDGQ ITI ERF CPE LFQPS +G E+ GIHE T NSI+KC VD R+D+Y
Sbjct: 226 TIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMY 285
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 87.8 bits (208), Expect = 6e-18
Identities = 38/80 (47%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
Frame = -1
Query: 504 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP---PERKYSVWIGGSILASLSTFQQ 334
+L+GGT+ + +R++K++ +P + ++K++A ER++SVWIGGSILASL +FQQ
Sbjct: 361 LLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQ 420
Query: 333 MWISKQEYDESGPSIVHRKC 274
MW SK EY+E G S + RKC
Sbjct: 421 MWFSKSEYEEHGASYIQRKC 440
Score = 57.6 bits (133), Expect = 7e-09
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 12/70 (17%)
Frame = -2
Query: 680 SYELPDGQVITIGNERFRCPEALFQPSFL----GME--------ACGIHETTYNSIMKCD 537
SYELPDGQ + IG +RF+ P+ +F PS + GME G+ SI KCD
Sbjct: 290 SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCD 349
Query: 536 VDIRKDLYAT 507
VDIR++LY++
Sbjct: 350 VDIRRELYSS 359
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 79.4 bits (187), Expect = 2e-15
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSIL 358
L+ +TVL GGTT G R QKE L S ++ ++ PPE YS W+GG+IL
Sbjct: 276 LLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAIL 334
Query: 357 ASLSTFQQMWISKQEYDESGPSIVHRKCF 271
A + Q ++K +YDE+GPS+VHRKCF
Sbjct: 335 AKVVFPQNQHVTKADYDETGPSVVHRKCF 363
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = -2
Query: 683 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHE 567
+ + LPDGQVI+IG ER+ EALFQPS LG+E GI E
Sbjct: 221 EQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVE 259
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 65.7 bits (153), Expect = 3e-11
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L + +L+GG+T++P + +R++ E+ L P +KI + VW GGS+LAS F
Sbjct: 338 LYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDF 397
Query: 339 QQMWISKQEYDESGPSIVHRKCF 271
+ M ++K EY+E G + R+ F
Sbjct: 398 ESMCVTKAEYEELGSARCRRRFF 420
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = -2
Query: 653 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLY 513
I + NERF PE LFQP+ LGM G+ E +I C ++ LY
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLY 339
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/92 (35%), Positives = 58/92 (63%), Gaps = 12/92 (13%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVWI 373
L +H VLSGG+TMYPG+ R++KEI T L + ++++I PP RK+ V++
Sbjct: 294 LYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYL 353
Query: 372 GGSILAS-LSTFQQMWISKQEYDESGPSIVHR 280
GG++LA + + WI++++Y E G + +++
Sbjct: 354 GGAVLAGIMKDAPEFWINREDYMEEGINCLNK 385
Score = 61.7 bits (143), Expect = 5e-10
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = -2
Query: 689 LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLY 513
L K+Y LPDG+VI +G ERF+ PEALF P + +E G+ + + I + D+D R LY
Sbjct: 237 LVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLY 295
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 16/93 (17%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTM----------------KIKIIAPPERK 388
L ++ VLSGG+TM+ R+Q+++ + + + ++ +++ P ++
Sbjct: 324 LYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQR 383
Query: 387 YSVWIGGSILASLSTFQQMWISKQEYDESGPSI 289
++VW GGS+L+S F +K+EY+E G SI
Sbjct: 384 FAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/68 (30%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Frame = -1
Query: 504 VLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQM 331
VL+GG+ PG+++R+++E+ PS++ I++I PP + W G ++++LS F
Sbjct: 396 VLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGP 455
Query: 330 W-ISKQEY 310
W I+++++
Sbjct: 456 WCITRKQF 463
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -2
Query: 698 SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCD 537
S + S E+ T+ ERF+ E LFQP GM A +H+ + CD
Sbjct: 328 SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCD 381
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = -2
Query: 653 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVD 531
I IG ERFRCPE LF P+ +G++ G+ E SI + D
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHD 629
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = -1
Query: 519 LVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 340
L +++GG ++ PG+ +R++ I + P I ++ + W G S A+ F
Sbjct: 637 LTSSILMTGGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNF 696
Query: 339 QQMWISKQEYDESG 298
+K +YDE G
Sbjct: 697 LGNAFTKMDYDEKG 710
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -1
Query: 501 LSGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILASLSTFQQ 334
L GG + G+ +++ + P T I + + E ++ W GG+IL L ++
Sbjct: 488 LIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGRE 547
Query: 333 MWISKQEYDESG 298
WI + ++ +G
Sbjct: 548 AWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -1
Query: 501 LSGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILASLSTFQQ 334
L GG + G+ +++ + P T I + + E ++ W GG+IL L ++
Sbjct: 500 LIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGRE 559
Query: 333 MWISKQEYDESG 298
WI + ++ +G
Sbjct: 560 AWIERHQWMVNG 571
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 31.5 bits (68), Expect = 0.56
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 376 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVHGGTTG 498
P GV+PL NDL+ WG S F + +H T G
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGSFPFAWRSAMKRTLHRATLG 232
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = -1
Query: 555 LHHEVRRGHP*GLVRHTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 382
++ E+ HP L + G + +YP ++K+ L ++ K + PP+RK++
Sbjct: 340 IYREILEYHPQLLKDYMNSEGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPPDRKHA 397
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +1
Query: 367 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDSRVHGGTTGQYGVAYKSL 525
S DP GVL W HC W G +CD H V S + G A +L
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVSLLEKQLEGVLSPAIANL 95
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 373 DPYGVLPLWRSNDLNLHCRW-GESCD 447
DP GVL W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At1g20950.1 68414.m02623 pyrophosphate--fructose-6-phosphate
1-phosphotransferase-related / pyrophosphate-dependent
6-phosphofructose-1-kinase-related similar to
pyrophosphate--fructose 6-phosphate 1-phosphotransferase
alpha subunit SP:Q41140 from [Ricinus communis]
Length = 614
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 430 WGESCDFLLHTVGDSRVHGGTTGQYGVAYKSLRMSTSHFMME 555
W + + L ++G +H G AY LR + F+ME
Sbjct: 493 WSQDASYTLTSIGRPAIHPAMVDLKGKAYDLLRQNAQKFLME 534
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 376 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVHGGTTG 498
P GV+PL NDL+ WG S F + +H + G
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGSFPFAWRSAVKRTLHRASMG 229
>At4g24175.1 68417.m03469 expressed protein
Length = 306
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = -1
Query: 696 QLPREVLRTSRRSGHHYRK------RKIPLPRGSLPTLVL 595
QL R + + S + HH+R +K+P P S+PTL+L
Sbjct: 3 QLIRPIRQLSPQCNHHFRNLRYLFSKKLPNPPSSIPTLLL 42
>At4g00750.1 68417.m00102 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -3
Query: 412 DHCSSREEVLRMDRWIDPRLPLYLPTDVDLETGVRRV 302
D C + +L MDR + P+ + + D+D+ T V+++
Sbjct: 555 DRCDMEDILLEMDRILRPKGSVIIRDDIDVLTKVKKI 591
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 322 RDP-HLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCD 447
R+P G E GEDR DP + + R NDL + + + D
Sbjct: 39 REPGEFAAGMEEGEDRPIDPISDIDITRINDLMFNSNFRAAAD 81
>At2g42760.1 68415.m05295 expressed protein
Length = 267
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 451 GNHSSRPIDNED*DHCSSREEVLRMDRWIDPRLPL-YLPTDVDLETGVRRVW 299
GN ++RP +E DHC R+ ++ I R+P ++VDL+ + R+W
Sbjct: 207 GNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNL-RLW 257
>At1g63930.1 68414.m07238 expressed protein ; expression supported
by MPSS
Length = 415
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 410 ILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVWRTSPYGCPRRT-S*WSYMWSRGCRKL 586
+++F++ A + RS + ++ VPP + W S G + W +G L
Sbjct: 269 VMVFVMWVLTAAVPCQERSGLANHLPVPPKHLNWAQSLIGIHEKIGDEWKKKEKKGSAGL 328
Query: 587 PYPRTRVGREPLGNGIFRF 643
TR+ E LG+ + F
Sbjct: 329 MEEMTRM--EKLGHSLMEF 345
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,995,385
Number of Sequences: 28952
Number of extensions: 360253
Number of successful extensions: 1110
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -