Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10569
(508 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6; Metazoa... 124 1e-27
UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72; Fungi/... 121 8e-27
UniRef50_Q0ULI2 Cluster: Predicted protein; n=12; Pezizomycotina... 95 1e-18
UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4; Bilater... 87 2e-16
UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22; Fung... 85 1e-15
UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella ve... 81 2e-14
UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyosteli... 79 6e-14
UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes va... 78 1e-13
UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22; Viri... 74 2e-12
UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila melanogaster|... 74 2e-12
UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177, w... 73 4e-12
UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2; ... 67 2e-10
UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containin... 65 8e-10
UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=... 65 8e-10
UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2; Cryptospor... 64 1e-09
UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3; ... 62 5e-09
UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=... 62 5e-09
UniRef50_O22165 Cluster: Probable ribosome biogenesis protein RL... 62 5e-09
UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3; ... 61 1e-08
UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;... 61 2e-08
UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10; Eurya... 59 5e-08
UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5; ... 59 7e-08
UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1; ... 59 7e-08
UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein RL... 59 7e-08
UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13... 58 9e-08
UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2; Cryptos... 58 2e-07
UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN full... 57 2e-07
UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative... 57 3e-07
UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein RL... 57 3e-07
UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia... 56 3e-07
UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2; Deutero... 56 3e-07
UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10... 56 5e-07
UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lambl... 56 6e-07
UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein RL... 55 8e-07
UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6; T... 54 1e-06
UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=... 54 2e-06
UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellul... 53 3e-06
UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, wh... 52 7e-06
UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1; ... 52 1e-05
UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1; ... 51 1e-05
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 50 2e-05
UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein RL... 50 4e-05
UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;... 48 2e-04
UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein RL... 47 2e-04
UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11; Eurya... 44 0.002
UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2; Thermoprot... 43 0.003
UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6; Haloba... 41 0.014
UniRef50_Q9AVV9 Cluster: 60S ribosomal protein L24; n=1; Guillar... 41 0.019
UniRef50_Q980Q6 Cluster: 50S ribosomal protein L24e; n=6; Thermo... 41 0.019
UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3; ... 38 0.17
UniRef50_Q9HJ58 Cluster: 50S ribosomal protein L24e; n=4; Thermo... 36 0.40
UniRef50_Q57Y61 Cluster: Protein kinase, putative; n=2; Trypanos... 34 2.1
UniRef50_Q7UHT8 Cluster: Putative uncharacterized protein; n=1; ... 32 6.5
>UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6;
Metazoa|Rep: 60S ribosomal protein L24 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 157
Score = 124 bits (299), Expect = 1e-27
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
MK+ LC++SGYKIYPGHG+ +VDGK F FLN+KC++A L +RNPR + WTVLYRRK K
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 323 KGPEEDQAKSRTRRTQKFQRAI 258
KG E+ +K RTRR KFQRAI
Sbjct: 61 KGQSEEVSKKRTRRAVKFQRAI 82
Score = 41.1 bits (92), Expect = 0.014
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = -2
Query: 327 QKGPRGRSSKESY*KDPKVPTCDCCASLGDIMAKRNMKPEVRKAQRE 187
+KG SK+ + K ASL +I+AKRN KPEVRKAQRE
Sbjct: 60 KKGQSEEVSKKRTRRAVKFQRAITGASLAEILAKRNQKPEVRKAQRE 106
>UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24 -
Homo sapiens (Human)
Length = 157
Score = 121 bits (292), Expect = 8e-27
Identities = 52/82 (63%), Positives = 63/82 (76%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
MK+ LC++SGYKIYPGHG+ + DGK F FLN+KC++A L +RNPR + WTVLYRRK K
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 323 KGPEEDQAKSRTRRTQKFQRAI 258
KG E+ K RTRR KFQRAI
Sbjct: 61 KGQSEEIQKKRTRRAVKFQRAI 82
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -2
Query: 252 ASLGDIMAKRNMKPEVRKAQRE 187
ASL DIMAKRN KPEVRKAQRE
Sbjct: 85 ASLADIMAKRNQKPEVRKAQRE 106
>UniRef50_Q0ULI2 Cluster: Predicted protein; n=12;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 161
Score = 94.7 bits (225), Expect = 1e-18
Identities = 43/77 (55%), Positives = 53/77 (68%)
Frame = -3
Query: 485 AYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFKKGPEED 306
++SG KIYPG GK ++ D K F F N K ++ L R+NPR ++WT LYRR KKG E+
Sbjct: 7 SFSGQKIYPGKGKLYIRGDSKIFRFQNGKTESLFLQRKNPRKISWTTLYRRMHKKGISEE 66
Query: 305 QAKSRTRRTQKFQRAIV 255
AK RTRRT K QRAIV
Sbjct: 67 VAKKRTRRTVKHQRAIV 83
>UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4;
Bilateria|Rep: 60S ribosomal protein L24 -
Caenorhabditis elegans
Length = 159
Score = 87.4 bits (207), Expect = 2e-16
Identities = 46/115 (40%), Positives = 66/115 (57%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
MK+ C YSGYKI+PGHGK +V+ DGK FL+ K +RRNPR + WTVLYR K K
Sbjct: 1 MKVETCVYSGYKIHPGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPRDIRWTVLYRIKNK 60
Query: 323 KGPEEDQAKSRTRRTQKFQRAIVVLHLVTLWLSVI*SLKYVKRRENRPLRRQRHK 159
KG + +R +K ++++ V++ LS+ KR + RRQ+ +
Sbjct: 61 KGTHGQEQVTR----KKTKKSVQVVNRAVAGLSL--DAILAKRNQTEDFRRQQRE 109
>UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 155
Score = 84.6 bits (200), Expect = 1e-15
Identities = 40/82 (48%), Positives = 53/82 (64%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
MK+ + ++SG KIYPG G V+ D K F F NSK + R+NPR + WTVL+R+ K
Sbjct: 1 MKVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHK 60
Query: 323 KGPEEDQAKSRTRRTQKFQRAI 258
KG E+ AK R+R+T K QR I
Sbjct: 61 KGITEEVAKKRSRKTVKAQRPI 82
>UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 143
Score = 80.6 bits (190), Expect = 2e-14
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -3
Query: 425 KTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFKKGPEEDQAKSRTRRTQKFQRAI 258
K F FLN +C+ A LMRRNPR VTWTVLYR K KKG +E+ +K RTRR KFQR++
Sbjct: 7 KVFNFLNKRCERALLMRRNPREVTWTVLYRCKHKKGTQEEVSKKRTRRNIKFQRSV 62
Score = 40.7 bits (91), Expect = 0.019
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = -2
Query: 327 QKGPRGRSSKESY*KDPKVPTCDCCASLGDIMAKRNMKPEVRKAQRE 187
+KG + SK+ ++ K ASL +I+AKRN KPEVRKAQRE
Sbjct: 40 KKGTQEEVSKKRTRRNIKFQRSVQGASLDNILAKRNQKPEVRKAQRE 86
>UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L24 -
Dictyostelium discoideum AX4
Length = 127
Score = 79.0 bits (186), Expect = 6e-14
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
MK LC YS +KIYP G V+ D K F F+N+K ++ + NPR + W+++YRR +K
Sbjct: 1 MKTSLCNYSEFKIYPARGMKFVRGDSKVFHFINTKVESLFFRKINPRDIRWSMVYRRIYK 60
Query: 323 KGPEEDQAKSRTRRTQKFQRAIV 255
+ AK + R+T+K +R IV
Sbjct: 61 NTTTDVSAKKKARKTKKVERNIV 83
>UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes
vannus|Rep: Ribosomal protein L24 - Euplotes vannus
Length = 155
Score = 77.8 bits (183), Expect = 1e-13
Identities = 35/89 (39%), Positives = 53/89 (59%)
Frame = -3
Query: 500 KLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFKK 321
K LC +S YK+YPG G V+ DG+TF FL+ K + H + +TWT ++RRK +K
Sbjct: 4 KTELCHFSEYKVYPGRGHRFVRKDGRTFFFLSRKTRSLHFQKVKTSDLTWTPMWRRKNRK 63
Query: 320 GPEEDQAKSRTRRTQKFQRAIVVLHLVTL 234
G A+ RT+RT + +A+V + L +
Sbjct: 64 GAYAKAARVRTKRTTRKMKAVVGMSLAEI 92
>UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22;
Viridiplantae|Rep: 60S ribosomal protein L24-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 164
Score = 74.1 bits (174), Expect = 2e-12
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
+K LC +SG KIYPG G ++ D + F FLNSKC + P + WT +YR++ K
Sbjct: 3 LKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHK 62
Query: 323 KGPEEDQAKSRTRRTQK-FQRAIV 255
K ++ K R R T+K + R+IV
Sbjct: 63 KDAAQEAVKRRRRATKKPYSRSIV 86
>UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila
melanogaster|Rep: RH14088p - Drosophila melanogaster
(Fruit fly)
Length = 123
Score = 73.7 bits (173), Expect = 2e-12
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = -3
Query: 380 MRRNPRTVTWTVLYRRKFKKGPEEDQAKSRTRRTQKFQRAIV 255
M+RNPR VTWTVLYRRK +KG EE+ +K RTRRTQKFQRAIV
Sbjct: 1 MKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIV 42
Score = 43.6 bits (98), Expect = 0.003
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = -2
Query: 327 QKGPRGRSSKESY*KDPKVPTCDCCASLGDIMAKRNMKPEVRKAQRE 187
+KG +SK+ + K ASL +I+AKRNMKPEVRKAQR+
Sbjct: 19 RKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEVRKAQRD 65
>UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=7; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_177,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 162
Score = 72.9 bits (171), Expect = 4e-12
Identities = 36/87 (41%), Positives = 51/87 (58%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
+K LC++S ++IYPGHG+ V DG+ F +LN K A + + + WTV +RR K
Sbjct: 3 IKTDLCSFSEWRIYPGHGRRFVAKDGRLFYYLNQKSRAFSARKIKSQEIQWTVAWRRLNK 62
Query: 323 KGPEEDQAKSRTRRTQKFQRAIVVLHL 243
K ++ AK R R K QRAIV + L
Sbjct: 63 KIKTDEGAKKRRIRNLKVQRAIVGISL 89
>UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L24 - Entamoeba histolytica HM-1:IMSS
Length = 163
Score = 67.3 bits (157), Expect = 2e-10
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
+K +CA+SG+KI G+ V++D K+F F+N K L + NPR V WT +YR+ K
Sbjct: 3 IKTQVCAFSGFKIPVAKGRKYVRLDLKSFTFINKKSLMQFLRKTNPRKVFWTAIYRQLNK 62
Query: 323 KGPEEDQA-KSRTRRTQKFQR 264
KG + + K +TRR K R
Sbjct: 63 KGQQNELVEKKKTRRVIKVNR 83
>UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L24e containing protein - Tetrahymena
thermophila SB210
Length = 158
Score = 65.3 bits (152), Expect = 8e-10
Identities = 30/87 (34%), Positives = 47/87 (54%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
++ G C++ Y+IYPG G+ + DG+ F FL K L + + +TWT+ RR +K
Sbjct: 3 VRTGTCSFCEYRIYPGRGQRFIAKDGRGFFFLTKKAKCLSLRKVKAQKITWTIARRRLWK 62
Query: 323 KGPEEDQAKSRTRRTQKFQRAIVVLHL 243
K D A+ + +R RAIV + L
Sbjct: 63 KVKATDIAQKKKKRNVTVARAIVGISL 89
>UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L24, putative -
Theileria parva
Length = 159
Score = 65.3 bits (152), Expect = 8e-10
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = -3
Query: 488 CAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFKKGPEE 309
C ++ Y++YPG GK V DGK + F+N K A H + P + W + +R+ KK E
Sbjct: 17 CNFTDYRVYPGRGKKFVARDGKVYFFINGKSAAFHKRKVKPAKLKWNLAWRKANKKFQTE 76
Query: 308 DQAKSRTRRTQKFQRAIVVLHL 243
+ R+++T + Q+AIV L L
Sbjct: 77 LFNRKRSKKTSRPQKAIVGLSL 98
>UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2;
Cryptosporidium|Rep: Ribosomal protein L24e -
Cryptosporidium hominis
Length = 133
Score = 64.5 bits (150), Expect = 1e-09
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
+K LC+YS Y+IYPG G+ V DG+ FLN KC + + P + W+V +RR K
Sbjct: 8 IKTDLCSYSEYRIYPGRGRKFVARDGRVSTFLNQKCASLFHQKIRPVKLKWSVGWRRMNK 67
Query: 323 KGPEED-QAKSRTRRTQKFQRAIVVLHL 243
K + +K R ++T + +AI L L
Sbjct: 68 KLTNQGATSKRRNKKTVRLHKAIEGLSL 95
>UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 178
Score = 62.5 bits (145), Expect = 5e-09
Identities = 28/82 (34%), Positives = 47/82 (57%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
+K C++S Y+IYPG G+ + DGK + +L+SK + L ++ + WT +RR K
Sbjct: 8 VKTEACSFSEYRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNK 67
Query: 323 KGPEEDQAKSRTRRTQKFQRAI 258
K E + R ++T K Q+A+
Sbjct: 68 KTKVEATQRRRYKKTIKVQKAV 89
>UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=2;
Plasmodium (Vinckeia)|Rep: 60S ribosomal protein L24,
putative - Plasmodium chabaudi
Length = 130
Score = 62.5 bits (145), Expect = 5e-09
Identities = 28/82 (34%), Positives = 47/82 (57%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
+K C++S Y+IYPG G+ + DGK + +L+SK + L ++ + WT +RR K
Sbjct: 8 VKTEACSFSEYRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNK 67
Query: 323 KGPEEDQAKSRTRRTQKFQRAI 258
K E + R ++T K Q+A+
Sbjct: 68 KTKVEATQRRRYKKTIKVQKAV 89
>UniRef50_O22165 Cluster: Probable ribosome biogenesis protein
RLP24; n=3; core eudicotyledons|Rep: Probable ribosome
biogenesis protein RLP24 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 159
Score = 62.5 bits (145), Expect = 5e-09
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
M+L C + IYPGHG V+ D K F F SKC M+RNPR V WT +R
Sbjct: 1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHG 60
Query: 323 KGPEED---QAKSRTRRTQKFQRAIVVLHLVTL-WLSVI*SLKYVKRRENR 183
K +D + + + R +++ R + L+ + ++ I + + K ENR
Sbjct: 61 KDMTKDTTFEFEKKRNRPERYDRNVTENTLMAIKKIAKIRTAREAKHIENR 111
>UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3;
cellular organisms|Rep: 60S ribosomal protein L24 -
Entamoeba histolytica HM-1:IMSS
Length = 179
Score = 61.3 bits (142), Expect = 1e-08
Identities = 26/56 (46%), Positives = 32/56 (57%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYR 336
M++ C + G IYPGHG V+ D K F F SKC + M+RNPR WT YR
Sbjct: 1 MRIEKCYFCGANIYPGHGMMFVRNDAKVFWFCRSKCHKSFKMKRNPRKFKWTKAYR 56
>UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;
cellular organisms|Rep: Ribosome biogenesis protein
rlp24 - Schizosaccharomyces pombe (Fission yeast)
Length = 192
Score = 60.9 bits (141), Expect = 2e-08
Identities = 29/72 (40%), Positives = 37/72 (51%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
M++ C + +YPGHG V+ D K F F SKC M+RNPR V WT YR+
Sbjct: 1 MRVHTCYFCSGPVYPGHGIMFVRNDSKVFRFCRSKCHKNFKMKRNPRKVAWTKAYRKAHG 60
Query: 323 KGPEEDQAKSRT 288
K D A + T
Sbjct: 61 KEMVYDTALAVT 72
>UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanococcus jannaschii
Length = 70
Score = 59.3 bits (137), Expect = 5e-08
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = -3
Query: 488 CAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYR 336
C++ GY+I PG GK +V+ DG F +SKC+ ++ M RNPR + WT +Y+
Sbjct: 7 CSFCGYEIEPGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPRKLKWTKVYQ 57
>UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 213
Score = 58.8 bits (136), Expect = 7e-08
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
M++ C Y IYPGHG ++ D + F F SKC + NPR V WT +YR++
Sbjct: 1 MRIEKCWYCSGNIYPGHGIHFIRNDARVFRFCRSKCHKHFKAKHNPRKVKWTKIYRKERN 60
Query: 323 KGPEEDQ 303
K +D+
Sbjct: 61 KELNDDK 67
>UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 178
Score = 58.8 bits (136), Expect = 7e-08
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
+++ C++ G I+PGHG V+ D K F F SKC + ++NPR +WT +R
Sbjct: 2 VRIEKCSFCGGPIWPGHGTVYVRNDCKVFRFCKSKCRKFWMKKKNPRKFSWTKAFRAAMG 61
Query: 323 KGPEEDQA---KSRTRRTQKFQRAIVVLHLVTLWL 228
K D ++R R K+ R +V L T+ L
Sbjct: 62 KDLVVDNVYDFETRCNRPVKYDRDLVATTLRTMRL 96
>UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein
RLP24; n=10; Coelomata|Rep: Probable ribosome biogenesis
protein RLP24 - Drosophila melanogaster (Fruit fly)
Length = 191
Score = 58.8 bits (136), Expect = 7e-08
Identities = 25/57 (43%), Positives = 32/57 (56%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRR 333
M++ C + KIYPGHG V+ D K F F KC A ++NPR V WT YR+
Sbjct: 1 MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57
>UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 198
Score = 58.4 bits (135), Expect = 9e-08
Identities = 35/115 (30%), Positives = 51/115 (44%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
M++ C + YPGHG V+ D K F F SKC A RRNPR + WT +R+
Sbjct: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
Query: 323 KGPEEDQAKSRTRRTQKFQRAIVVLHLVTLWLSVI*SLKYVKRRENRPLRRQRHK 159
K D + +R R LV L + ++ +++R R + R K
Sbjct: 61 KELAVDSTLTFAQRRNVPVR--YNRELVATTLKAMSRIEEIRQRRERAFYKNRMK 113
>UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L24 -
Cryptosporidium parvum Iowa II
Length = 202
Score = 57.6 bits (133), Expect = 2e-07
Identities = 25/57 (43%), Positives = 30/57 (52%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRR 333
M++ C Y IYPGHG V+ D K F F SKC M+ NPR WT YR+
Sbjct: 6 MRIEKCWYCSSNIYPGHGVTFVRNDAKIFRFCRSKCHRHFKMKHNPRKSKWTKAYRK 62
>UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830167A21
product:Similar to 60S ribosomal protein L30 isolog,
full insert sequence; n=3; Murinae|Rep: Bone marrow
macrophage cDNA, RIKEN full-length enriched library,
clone:I830167A21 product:Similar to 60S ribosomal
protein L30 isolog, full insert sequence - Mus musculus
(Mouse)
Length = 171
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
M++ C + IYPGHG V+ D K F F SKC +RNPR V WT +R+
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
Query: 323 KGPEEDQA---KSRTRRTQKFQRAI 258
K D + + R K+QR +
Sbjct: 61 KELTVDNSFEFEKRRNEPVKYQREL 85
>UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative;
n=2; Theileria|Rep: 60S ribosomal protein L24/L30,
putative - Theileria annulata
Length = 187
Score = 56.8 bits (131), Expect = 3e-07
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRR--- 333
M + C IYPGHG V+ D K F F SKC + NPR + WT YRR
Sbjct: 1 MNINKCWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHRHFKAKHNPRKIKWTKAYRRLQG 60
Query: 332 KFKKGPEEDQAKSRTRRTQKFQRAIVV 252
K + E + + R R ++ R + +
Sbjct: 61 KELRNDENLEMELRKNRPVRYDRDLYI 87
>UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein
RLP24; n=35; Euteleostomi|Rep: Probable ribosome
biogenesis protein RLP24 - Homo sapiens (Human)
Length = 163
Score = 56.8 bits (131), Expect = 3e-07
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
M++ C + IYPGHG V+ D K F F SKC +RNPR V WT +R+
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
Query: 323 KGPEEDQA---KSRTRRTQKFQRAI 258
K D + + R K+QR +
Sbjct: 61 KELTVDNSFEFEKRRNEPIKYQREL 85
>UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_2_13062_12754 - Giardia lamblia ATCC
50803
Length = 102
Score = 56.4 bits (130), Expect = 3e-07
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = -3
Query: 488 CAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFKKGPEE 309
C+YSG KI PG+GK M + D FLN K +L + NPR + WT+ RR +G +E
Sbjct: 7 CSYSGRKILPGYGKRMSRHDKVLLIFLNRKASVHYLNKWNPRKIRWTLASRR--ARG-KE 63
Query: 308 DQAKSRTRRTQK 273
K+R R T+K
Sbjct: 64 VIVKARERVTRK 75
>UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2;
Deuterostomia|Rep: 60S ribosomal protein L24 -
Oikopleura dioica (Tunicate)
Length = 165
Score = 56.4 bits (130), Expect = 3e-07
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
M++ C + +YPGHG V+ D K F F +KC+ ++NPR + WT YR+
Sbjct: 1 MRVEKCYFCSAPVYPGHGTVFVRNDSKQFRFCTAKCNKMFKKKKNPRKIKWTKAYRKAHG 60
Query: 323 K 321
K
Sbjct: 61 K 61
>UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 199
Score = 56.0 bits (129), Expect = 5e-07
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRR 333
M++ C + YPGHG V+ D K F F SKC A RRNPR + WT +R+
Sbjct: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRK 57
>UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_26137_25568 - Giardia lamblia
ATCC 50803
Length = 189
Score = 55.6 bits (128), Expect = 6e-07
Identities = 26/72 (36%), Positives = 33/72 (45%)
Frame = -3
Query: 488 CAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFKKGPEE 309
C++ +YPG G V+ D + F F SKC M+RNPR V WT YR K
Sbjct: 7 CSFCSKPVYPGKGICFVRNDSRVFRFCTSKCHRNFKMKRNPRKVRWTKTYRLLHNKDMAT 66
Query: 308 DQAKSRTRRTQK 273
D RR +
Sbjct: 67 DTTYDFERRRNR 78
>UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Eukaryota|Rep: Probable ribosome biogenesis
protein RLP24 - Dictyostelium discoideum (Slime mold)
Length = 164
Score = 55.2 bits (127), Expect = 8e-07
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
M++ C + +YPGHG V+ D K F F SKC ++RNPR WT +R+
Sbjct: 1 MRIEKCYFCSGPVYPGHGVMFVRNDCKQFRFCRSKCHKNFKLKRNPRKTRWTKAFRKLNG 60
Query: 323 KGPEEDQA---KSRTRRTQKFQRAIV 255
K D+ + + R K+ R ++
Sbjct: 61 KEMTVDKTLEFEKKRNRPVKYDRELI 86
>UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L24, putative -
Leishmania major
Length = 124
Score = 54.4 bits (125), Expect = 1e-06
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = -3
Query: 488 CAYSGYKIYPGHGKAMVKV----DGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFKK 321
C +S + ++PGHG+ V F KC A ++ ++NPR + WT YRR +K
Sbjct: 6 CEFSHFAVHPGHGRRYVPFAFLSTKPVLTFSRPKCFALYMRKKNPRFIPWTRTYRRIHRK 65
Query: 320 GPEEDQAKSRTRRTQKFQRAIV 255
+ + R R + QRAIV
Sbjct: 66 TTTDRVNRRRAARAVRVQRAIV 87
>UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L24, putative -
Babesia bovis
Length = 192
Score = 54.0 bits (124), Expect = 2e-06
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
M++ C IYPGHG V+ D K F F SKC + NPR + WT RR
Sbjct: 1 MRIDKCWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHKHFKAKHNPRKLKWTKAARRMHG 60
Query: 323 KGPEEDQAKSRTRRTQKFQRAIVVLHLVTLWLSVI*SLKYVKRRENRP---LRRQRHK 159
K D + RR R V + L+++ I ++K +R E LR++R +
Sbjct: 61 KEMITDDSVEMERR-----RNAPVRYDRNLYITAIKTIKKAERVEELRKLLLRKERRR 113
>UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellular
organisms|Rep: 50S ribosomal protein L24e -
Archaeoglobus fulgidus
Length = 58
Score = 53.2 bits (122), Expect = 3e-06
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHL-MRRNPRTVTWTVLYRR 333
M+ +C++ GY I PG GK V+ DG+ F F + KC+ L ++R PR + WT Y R
Sbjct: 1 MEKRVCSFCGYDIEPGTGKMYVRRDGRVFYFCSGKCEKNMLKLKRKPRKLKWTKHYSR 58
>UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_52, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 171
Score = 52.0 bits (119), Expect = 7e-06
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
M++ C + IYPGHG V+ D K F F SKC + NPR WT +R+
Sbjct: 1 MRIEKCYFCSGPIYPGHGIVFVRNDSKMFRFCRSKCHRHFKAQHNPRKTRWTKAFRKAAG 60
Query: 323 KGPEED 306
K D
Sbjct: 61 KEMTND 66
>UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 113
Score = 51.6 bits (118), Expect = 1e-05
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = -3
Query: 500 KLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFKK 321
K +C +SG+ + GHG+ ++ D AF + K +RNPR + WT YR KK
Sbjct: 4 KTEICGFSGHIFHAGHGRVHIREDKHLMAFESRKAFRMWERKRNPRKIAWTEHYRHDHKK 63
Query: 320 GPEEDQAKSRTRRTQKFQR 264
+ A + + +K R
Sbjct: 64 SVADTAATEKRAQRKKATR 82
>UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 181
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRR 333
M++ C + YPG G V+ D K F F SKC ++RNPR V WT +R+
Sbjct: 1 MRIEHCFFCSAPCYPGKGITFVRNDAKIFKFCKSKCHKNFKLKRNPRKVRWTKAFRK 57
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 50.4 bits (115), Expect = 2e-05
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
M++ C + +YP G V+ D K+F F SKC A M+R PR + WT +R
Sbjct: 1 MRVETCHFCSRPVYPSKGITFVRNDAKSFRFCRSKCHANFKMKRQPRKLKWTKTHRAARG 60
Query: 323 KGPEEDQAKSRTRRTQKFQRAIVV-LHLVTLWLSVI*SLKYVKRRENRPLRRQR 165
K D + ++ +K + +LV + + ++ ++ R R ++R
Sbjct: 61 KEMIVDSSLVLSQFAKKRNTPVKYDRNLVAATIKAMERVEEIRARRERAFTKRR 114
>UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein
RLP24; n=1; Encephalitozoon cuniculi|Rep: Probable
ribosome biogenesis protein RLP24 - Encephalitozoon
cuniculi
Length = 155
Score = 49.6 bits (113), Expect = 4e-05
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
M++ C + IY GHG V+ D K F F KC R NPR V WT + R+
Sbjct: 1 MRIEKCWFCSSNIYQGHGTIYVRNDAKVFRFCRPKCRKLFARRVNPRKVKWTKISRKMAN 60
Query: 323 K 321
K
Sbjct: 61 K 61
>UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;
Ajellomyces capsulatus NAm1|Rep: Ribosome biogenesis
protein RLP24 - Ajellomyces capsulatus NAm1
Length = 191
Score = 47.6 bits (108), Expect = 2e-04
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYR 336
M++ C + YP G V+ D +TF F SKC M+R PR + WT +R
Sbjct: 1 MRIETCHFCSQPCYPSKGITFVRNDARTFRFCRSKCHKNFKMKRQPRKLKWTKTHR 56
>UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Caenorhabditis|Rep: Probable ribosome
biogenesis protein RLP24 - Caenorhabditis elegans
Length = 162
Score = 47.2 bits (107), Expect = 2e-04
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFK 324
M++ C + IYPGHG V+ D F F S+C+ ++NPR + +T RR
Sbjct: 1 MRIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPRKLRFTKAARRARG 60
Query: 323 KGPEEDQAKSRTRRTQ---KFQRAI 258
K D + +R K++RA+
Sbjct: 61 KELINDATQLLEQRRDEPVKYERAM 85
>UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 62
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -3
Query: 488 CAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFKK 321
C + G + PG GK +K DG T+ +SKC + + R PR WT + + KK
Sbjct: 6 CYFCGQMLEPGTGKLYIKKDGSTYFMCSSKCMSNFALGRLPRRTEWTEKGKIQLKK 61
>UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2;
Thermoproteaceae|Rep: Ribosomal protein L24E -
Caldivirga maquilingensis IC-167
Length = 70
Score = 43.2 bits (97), Expect = 0.003
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = -3
Query: 503 MKLGLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHL-MRRNPRTVTWTVLYRRKF 327
M++ C+Y G I PG+G V+VDG F + +C + + M +NP+ W RK
Sbjct: 1 MRIYNCSYCGRPIPPGYGIMYVRVDGVVLRFCSRRCFVSMVKMGKNPQKQAWV----RKI 56
Query: 326 KKGPEEDQAKSRTR 285
++ Q+KS ++
Sbjct: 57 RRAKSAAQSKSSSK 70
>UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6;
Halobacteriaceae|Rep: 50S ribosomal protein L24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 67
Score = 41.1 bits (92), Expect = 0.014
Identities = 24/63 (38%), Positives = 30/63 (47%)
Frame = -3
Query: 488 CAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFKKGPEE 309
C Y G I PG G V DG T F +SKC+ + R R + WT R + G E
Sbjct: 7 CDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTARG--EAGEAE 64
Query: 308 DQA 300
D+A
Sbjct: 65 DEA 67
>UniRef50_Q9AVV9 Cluster: 60S ribosomal protein L24; n=1; Guillardia
theta|Rep: 60S ribosomal protein L24 - Guillardia theta
(Cryptomonas phi)
Length = 106
Score = 40.7 bits (91), Expect = 0.019
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -3
Query: 491 LCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFKKGPE 312
+C + G IYPGHG V F F ++KC + + + + WT+ + + K
Sbjct: 3 ICNFCGIGIYPGHGSMFVTNKFDKFYFCSTKCKKLKKIGKTNKGLKWTIKFSKLNKFNEI 62
Query: 311 EDQAKS-RTRRTQK 273
+Q K + +T+K
Sbjct: 63 SNQIKKIKLNKTEK 76
>UniRef50_Q980Q6 Cluster: 50S ribosomal protein L24e; n=6;
Thermoprotei|Rep: 50S ribosomal protein L24e -
Sulfolobus solfataricus
Length = 61
Score = 40.7 bits (91), Expect = 0.019
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 488 CAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHL-MRRNPRTVTWTVLYRR 333
C++ G++I PG G V+ DG F +SKC + L R+P+ WT Y +
Sbjct: 7 CSFCGHEIPPGTGLMYVRNDGTILWFCSSKCRKSMLKYHRDPKKYKWTTRYMK 59
>UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 202
Score = 37.5 bits (83), Expect = 0.17
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -3
Query: 419 FAFLNSKCDAAHLMRRNPRTVTWTVLYRRKFKKGPEEDQAKSRTRRTQKFQR 264
F F SKC M+RNPR V WT YR K +D R+ + +R
Sbjct: 67 FRFCRSKCHKNFKMKRNPRKVKWTKAYRCLHGKDMTQDSTFEFERKRNRPER 118
>UniRef50_Q9HJ58 Cluster: 50S ribosomal protein L24e; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L24e -
Thermoplasma acidophilum
Length = 67
Score = 36.3 bits (80), Expect = 0.40
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 488 CAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCDAAHL-MRRNPRTVTWTVLY 339
C++ G I PG G V+ DG F ++KC + + R PR V WT Y
Sbjct: 7 CSFCGKAIEPGTGIMYVRKDGAILYFCSNKCRKNMIELNRVPRYVKWTNEY 57
>UniRef50_Q57Y61 Cluster: Protein kinase, putative; n=2; Trypanosoma
brucei|Rep: Protein kinase, putative - Trypanosoma
brucei
Length = 899
Score = 33.9 bits (74), Expect = 2.1
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -2
Query: 330 VQKGPRGRSSKESY*KDPKVPTCDCCASLGD 238
V GPRG+ SK K KVPT +C AS D
Sbjct: 237 VGTGPRGKGSKNDASKSKKVPTLNCAASDSD 267
>UniRef50_Q7UHT8 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 816
Score = 32.3 bits (70), Expect = 6.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 179 MACSLCALRTSGFILRLAIMSPSEAQQSHVGTFGSF 286
+ACS+C G LA ++ S Q HV FGSF
Sbjct: 301 LACSVCHQEHHGADANLAAITDSRCQTCHVNQFGSF 336
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,844,770
Number of Sequences: 1657284
Number of extensions: 7899211
Number of successful extensions: 18335
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 18000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18330
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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