Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10569
         (508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   0.90 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.1  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   6.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   6.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   6.3  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 427 PSTLTMALPWPGYILYPL*AQSPSFIL 507
           PS  T+A+P  GY+++   A +P + L
Sbjct: 642 PSKDTIAVPNNGYVIFRFRADNPGYWL 668


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 427 PSTLTMALPWPGYILYPL*AQSPSFIL 507
           P+  T+A+P  GY++  L A +P F L
Sbjct: 642 PAKDTIAVPNNGYVVLRLRANNPGFWL 668


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 275 KFQRAIVVLHLVTLWLSVI*SLKYVKRRENRPLR 174
           K +  ++V  LV L + +  S +  +RR  RPL+
Sbjct: 8   KLRTVLIVTLLVVLLVHISSSERVTRRRLRRPLK 41


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 494 GLCAYSGYKIYPGHGKAMVKVDGKTFAFLNSKCD 393
           G C Y    + PG  K+  K+D   F F +  CD
Sbjct: 114 GSCLY----VPPGIFKSTCKIDITWFPFDDQHCD 143


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 254 VLHLVTLWLSVI*SLKYVKRRE 189
           +L  VTLWLS + SL    +R+
Sbjct: 139 ILSDVTLWLSNVNSLTLTLKRK 160


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 254 VLHLVTLWLSVI*SLKYVKRRE 189
           +L  VTLWLS + SL    +R+
Sbjct: 65  ILSDVTLWLSNVNSLTLTLKRK 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,308
Number of Sequences: 336
Number of extensions: 1985
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)