Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10568
(489 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 129 3e-29
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 108 7e-23
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 106 3e-22
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 101 1e-20
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 89 5e-17
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 84 2e-15
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 83 2e-15
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 78 9e-14
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 72 6e-12
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 70 3e-11
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 67 2e-10
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 64 2e-09
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 58 8e-08
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 57 2e-07
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 53 4e-06
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 52 5e-06
UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1; Caldiv... 44 0.002
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 44 0.002
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 42 0.006
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 40 0.039
UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3; Methan... 37 0.21
UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1; Methan... 37 0.21
UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1; Archae... 37 0.28
UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3; Sulfol... 36 0.48
UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2; Desulf... 36 0.48
UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2; ... 35 0.84
UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5; Euryar... 35 1.1
UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1; Thermo... 34 1.5
UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gamb... 33 2.6
UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1; ... 33 2.6
UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain pro... 33 4.5
UniRef50_Q4UH33 Cluster: Putative uncharacterized protein; n=4; ... 33 4.5
UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella ... 32 6.0
UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1; Nanoar... 32 6.0
UniRef50_UPI00015529D0 Cluster: PREDICTED: similar to DNA-direct... 32 7.9
UniRef50_UPI00005864EC Cluster: PREDICTED: hypothetical protein;... 32 7.9
UniRef50_Q1FH35 Cluster: Resolvase-like:Recombinase; n=1; Clostr... 32 7.9
UniRef50_Q14QN3 Cluster: Hypothetical abc transporter permease c... 32 7.9
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 129 bits (312), Expect = 3e-29
Identities = 59/71 (83%), Positives = 64/71 (90%)
Frame = +1
Query: 43 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 222
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 223 FGGGKSTGFAL 255
FGGGK+TGF +
Sbjct: 64 FGGGKTTGFGM 74
Score = 88.2 bits (209), Expect = 9e-17
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = +3
Query: 255 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 392
IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 75 IYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 108 bits (259), Expect = 7e-23
Identities = 48/68 (70%), Positives = 59/68 (86%)
Frame = +1
Query: 52 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 231
IRTRKFM+NRLL R+QMV D+LHPG+ +S +IRE+LAK YK +PD+VF FGF+T+FGG
Sbjct: 7 IRTRKFMSNRLLFRRQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFRTHFGG 66
Query: 232 GKSTGFAL 255
GKSTGFAL
Sbjct: 67 GKSTGFAL 74
Score = 38.7 bits (86), Expect = 0.069
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 255 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 371
+YD+LD AKKFEP++RL R + P R++ +ER +
Sbjct: 75 VYDSLDHAKKFEPRYRLIRVKWVAGRHPQRQKVEERTQK 113
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 106 bits (254), Expect = 3e-22
Identities = 49/76 (64%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
Frame = +1
Query: 31 MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVF 207
M+E TIRTR FMTNRLLARKQ V DVLHPG+ VSK E++EKLA+MY+V P+ +F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 208 GFKTNFGGGKSTGFAL 255
F+T+FGGGKS+G+ L
Sbjct: 61 KFRTHFGGGKSSGYGL 76
Score = 64.1 bits (149), Expect = 2e-09
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +3
Query: 255 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 389
IYDT++ AKKFEPK+RL R+GL K +RKQ KERKNR KK+RG
Sbjct: 77 IYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIRG 121
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 101 bits (241), Expect = 1e-20
Identities = 46/70 (65%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Frame = +1
Query: 49 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 225
T+RTRKFMTNRLL+RKQ V +VLHPG+ VSK +++EKLAK+Y+V + +FVF F+T+F
Sbjct: 11 TLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHF 70
Query: 226 GGGKSTGFAL 255
GGGKSTGF L
Sbjct: 71 GGGKSTGFGL 80
Score = 35.9 bits (79), Expect(2) = 8e-06
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 312 HGLYEKKRPTRKQRKERKNRMKKVRG 389
+GL K +RKQ KERKNR KK+RG
Sbjct: 128 NGLATKVEKSRKQMKERKNRAKKIRG 153
Score = 35.5 bits (78), Expect(2) = 8e-06
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 186 SRCSVRIRFQDKLRRWQVNWIRFIYDTLDLAKKFEPKHRLAR 311
S C +F+ + IYD LD AKK+EPK+RL R
Sbjct: 58 SNCIFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIR 99
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 89.0 bits (211), Expect = 5e-17
Identities = 42/71 (59%), Positives = 51/71 (71%)
Frame = +1
Query: 43 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 222
T IRT+K + N LL+R+Q+ DVLHP PT SK +IRE+LAK KV V V+GF T
Sbjct: 2 TIVIRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQ 61
Query: 223 FGGGKSTGFAL 255
+GGGKSTGFAL
Sbjct: 62 YGGGKSTGFAL 72
Score = 34.3 bits (75), Expect = 1.5
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 255 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 389
+YD K+EP +RL + + +K TR+ KE K ++K+ G
Sbjct: 73 VYDNQQYLLKYEPNYRLRKVKILGEKPNTRRSFKELKRKIKRTSG 117
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 83.8 bits (198), Expect = 2e-15
Identities = 37/70 (52%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = +1
Query: 49 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 225
TIR +K+M+N LL RKQ ++LHP K +V+K E++E+LAKMYK+ + + +FGFKT F
Sbjct: 6 TIRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLF 65
Query: 226 GGGKSTGFAL 255
GGG++ GF L
Sbjct: 66 GGGRTKGFGL 75
Score = 52.4 bits (120), Expect = 5e-06
Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +3
Query: 255 IYDTLDLAKKFEPKHRLARHGLYEKK-RPTRKQRKERKNRMKKVRGT 392
IY +D KKFE K+RL R GL +K+ + R+ KE KNR KKVRGT
Sbjct: 76 IYKNVDAVKKFEKKYRLVREGLIDKETKAGRRASKELKNRRKKVRGT 122
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 83.4 bits (197), Expect = 2e-15
Identities = 38/70 (54%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = +1
Query: 49 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 225
T+R R+F+ N LLARKQ V DV+HP VSK++++ KLAK+YKV + + +FGFKT F
Sbjct: 33 TVRVRQFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFKTAF 92
Query: 226 GGGKSTGFAL 255
GGG+S+GF +
Sbjct: 93 GGGRSSGFCV 102
Score = 50.4 bits (115), Expect = 2e-05
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 186 SRCSVRIRFQDKLRRWQVNWIRFIYDTLDLAKKFEPKHRLARHGLYEKKRPT-RKQRKER 362
+ C V F+ + + IY+ + KKFE ++R R G+ EK T RK RKE
Sbjct: 80 ANCIVLFGFKTAFGGGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEKVTATGRKGRKET 139
Query: 363 KNRMKKVRGT 392
KNR KKVRGT
Sbjct: 140 KNRRKKVRGT 149
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 78.2 bits (184), Expect = 9e-14
Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +1
Query: 49 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 225
TIRTR + N LL RKQ+V D+ HPG TEI+EKLAKMYKV + + GF T +
Sbjct: 9 TIRTRNLIVNPLLCRKQVVVDIYHPGIVQPKFTEIKEKLAKMYKVKDVQTIVLNGFVTKY 68
Query: 226 GGGKSTGFAL 255
GGGK++GFAL
Sbjct: 69 GGGKTSGFAL 78
Score = 48.0 bits (109), Expect = 1e-04
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3
Query: 255 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMK 377
IYDTL KKF PKH+L R GL +K + RK RKE K + +
Sbjct: 79 IYDTLSALKKFVPKHQLIRAGLDKKTKAPRKARKEHKKKWR 119
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 72.1 bits (169), Expect = 6e-12
Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +1
Query: 25 FKMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGK-PTVSKTEIREKLAKMYKVTPDV-- 195
F+ + IRT +F N+LL RKQ + +V HP TV IR+KLA +YKV PD
Sbjct: 3 FQKKKAEVCIRTSQFKVNKLLNRKQFIVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQ 61
Query: 196 VFVFGFKTNFGGGKSTGFAL 255
V +FGFKT FGGGK+TGF L
Sbjct: 62 VSLFGFKTKFGGGKTTGFGL 81
Score = 50.4 bits (115), Expect = 2e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +3
Query: 210 FQDKLRRWQVNWIRFIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 389
F+ K + IYD L K+FEP +R R G + + P RK KER+NR KK+RG
Sbjct: 67 FKTKFGGGKTTGFGLIYDDLASLKRFEPNYRKTRMGFGKARLPARKSVKERRNRNKKLRG 126
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 69.7 bits (163), Expect = 3e-11
Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 20/82 (24%)
Frame = +1
Query: 70 MTNRLLARKQMV-----------CDVLHPGKPTVSK--------TEIREKLAKMYKVTPD 192
MTNRLL R+Q V CDVLHPG+ VSK E++EK+AKMY V+ +
Sbjct: 1 MTNRLLQRRQFVRLTNVFHQSQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDE 60
Query: 193 -VVFVFGFKTNFGGGKSTGFAL 255
V +FGF+T FGGGKSTGF L
Sbjct: 61 KCVSIFGFRTAFGGGKSTGFGL 82
Score = 60.5 bits (140), Expect = 2e-08
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +3
Query: 255 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 389
IYD +D KKFEPKHRL R GL + + +RK KE+KNR+KK+RG
Sbjct: 83 IYDNIDAFKKFEPKHRLIRAGLKDAVQKSRKNIKEKKNRVKKLRG 127
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 66.9 bits (156), Expect = 2e-10
Identities = 28/67 (41%), Positives = 44/67 (65%)
Frame = +1
Query: 49 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 228
++ RK++ N+LL RKQ V D+ H G ++ EI++++A K D+V +FG +T FG
Sbjct: 5 SVHIRKYIVNKLLDRKQFVIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGLETKFG 64
Query: 229 GGKSTGF 249
GG +TGF
Sbjct: 65 GGHTTGF 71
Score = 53.2 bits (122), Expect = 3e-06
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +3
Query: 252 FIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 392
F+YD+LD KK EPKHRL + GL EK + TR+ RK + + KV G+
Sbjct: 73 FVYDSLDALKKTEPKHRLIKAGLAEKGKVTRRMRKNARRQKVKVWGS 119
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 63.7 bits (148), Expect = 2e-09
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +1
Query: 43 TATIRTRKFMTNRLLA-RKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 219
T ++TRK + + L R+Q+ ++LHP KPT S+ + ++LA YK V V+G +T
Sbjct: 34 TFIVKTRKVLLKQSLEIRRQLSVELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRT 93
Query: 220 NFGGGKSTGFAL 255
FGG ++TGFAL
Sbjct: 94 TFGGNRTTGFAL 105
Score = 48.0 bits (109), Expect = 1e-04
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +3
Query: 255 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 389
IYDT KFEPK RL R G+ K+ +RK KE K+++KK RG
Sbjct: 106 IYDTQQYLLKFEPKFRLRRRGIIPKRDGSRKGWKEVKSKLKKTRG 150
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 58.4 bits (135), Expect = 8e-08
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +1
Query: 52 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNFG 228
++T+KF N LL RKQ + + K +SK +R +L+K Y++ P ++F+FG K NFG
Sbjct: 10 LKTKKFKNNPLLKRKQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNFG 69
Query: 229 GGKSTGF 249
G K + F
Sbjct: 70 GFKCSAF 76
Score = 48.4 bits (110), Expect = 8e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +3
Query: 252 FIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 389
+IY L+ A+ EPKHRL ++ L + + + KQRKE+KN+MKK G
Sbjct: 78 YIYYNLEAARVNEPKHRLIKNNLMKLELQSSKQRKEKKNKMKKYFG 123
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = -1
Query: 234 ATSEVCLETEYEHYIGSNLVHFGELLTDLGLADGWFSWM*NIANHLLARQQSVGHELASA 55
ATS+V +T++++ I LVH +L +D L D F+WM I +HLLA Q+SV H+L+ +
Sbjct: 69 ATSKVSPKTKHKNNIWGCLVHLCQLFSDFSLGDSSFAWMKYINDHLLALQKSVCHKLSCS 128
Query: 54 NSRC 43
+S C
Sbjct: 129 DSHC 132
Score = 38.3 bits (85), Expect = 0.091
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Frame = -2
Query: 425 LLGGRTYFRFLGTADLLHSVLTFFTLFARGPLLLVQAVAG*PVLGLELLGQIECVVDKAN 246
LL T+ F T LHSVL FFTL + LL++ + G V L L ++ VVD A
Sbjct: 5 LLFTSTHICFGCTPYFLHSVLAFFTLLSGSLFLLIKPMLGKSVFRLILFCIVKRVVDHAK 64
Query: 245 PVDLPPPKFVLK-PNTNTTSGVTLYILASFSRISV 144
K K + N G +++ FS S+
Sbjct: 65 ACSFATSKVSPKTKHKNNIWGCLVHLCQLFSDFSL 99
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 52.8 bits (121), Expect = 4e-06
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +1
Query: 76 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKST 243
NRLL+RK++ HPG P SK EIREK++++Y+ D V V K +G ++T
Sbjct: 8 NRLLSRKELDVVAYHPGMPIPSKEEIREKISELYQTKKDNVVVMDLKNRYGTHRTT 63
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 52.4 bits (120), Expect = 5e-06
Identities = 21/67 (31%), Positives = 40/67 (59%)
Frame = +1
Query: 52 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 231
I+ + N+L+ RK++ ++ HPG+PT S+ +++ KL M + P+ + ++ FG
Sbjct: 3 IKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGS 62
Query: 232 GKSTGFA 252
KS G+A
Sbjct: 63 YKSKGYA 69
>UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1;
Caldivirga maquilingensis IC-167|Rep: 30S ribosomal
protein S24e - Caldivirga maquilingensis IC-167
Length = 155
Score = 43.6 bits (98), Expect = 0.002
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +1
Query: 40 GTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 219
G ++ + N LL RK++ V H G PT + ++RE+LAK P++ +V T
Sbjct: 36 GKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKALGSNPELTYVTHVYT 95
Query: 220 NFGGGKS 240
+G G S
Sbjct: 96 QYGVGVS 102
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +1
Query: 76 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKS 240
N+LLAR++++ + +H T ++ +RE +AK + VFV KT FG G+S
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFVRRIKTEFGRGRS 68
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 42.3 bits (95), Expect = 0.006
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 100 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 198
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 39.5 bits (88), Expect = 0.039
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 76 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKS 240
N+++ RK++ V H G PT S+ +IR+ ++ D+V + T +G G S
Sbjct: 23 NKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKEDLVVIRKINTGYGAGIS 77
>UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S24e -
Methanobacterium thermoautotrophicum
Length = 100
Score = 37.1 bits (82), Expect = 0.21
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 76 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFA 252
N LL RK++ + L+ G+ T E++ KL M D++ V FG ++TG+A
Sbjct: 11 NPLLNRKEIRFECLYEGESTPKVLEVKNKLVAMLDADKDLLVVDKIDQGFGEPRATGYA 69
>UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S24e -
Methanopyrus kandleri
Length = 116
Score = 37.1 bits (82), Expect = 0.21
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 76 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFA 252
N LL RK++ V H T K+E+ KLA + V +VV + ++ FG ++ G+A
Sbjct: 11 NPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEFGKRETKGYA 69
>UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S24e -
Archaeoglobus fulgidus
Length = 110
Score = 36.7 bits (81), Expect = 0.28
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +1
Query: 76 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 228
N LL R+++ C + GK T S+ E+R K+A + P+ V V KT FG
Sbjct: 14 NPLLRRREVYCRLSFEGK-TPSRKEVRGKIAGLMNAEPERVVVDYIKTEFG 63
>UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3;
Sulfolobus|Rep: 30S ribosomal protein S24e - Sulfolobus
tokodaii
Length = 120
Score = 35.9 bits (79), Expect = 0.48
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +1
Query: 28 KMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVF 207
K+SE I R + N ++ R+++ V H G T+S+ ++ + +A Y D+V +
Sbjct: 10 KISEKAEGIVERD-IKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIK 68
Query: 208 GFKTNFGGGKS 240
T +G G S
Sbjct: 69 KIHTLYGAGIS 79
>UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S24e -
Aeropyrum pernix
Length = 118
Score = 35.9 bits (79), Expect = 0.48
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +1
Query: 76 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKS 240
N L+ R+++V + H KPT + +R+KLA++ V +++ KT +G G S
Sbjct: 28 NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGVDIKRIYIRYIKTGYGAGLS 82
>UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 326
Score = 35.1 bits (77), Expect = 0.84
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 242 LDSLYLRHTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGPRYQE 397
L + +RH R+ + + + PP+PV+E E + A EQ EE P +E
Sbjct: 108 LSKITVRHPRNTEPFKELNPLLPPKPVKEGEEEEEKAEEEEEQKEEEPENEE 159
>UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 101
Score = 34.7 bits (76), Expect = 1.1
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +1
Query: 52 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 231
I+ K N LL R+++ V + G T S+ ++R KLA M +++ + KT +G
Sbjct: 3 IKIIKDKKNPLLNRRELDFIVKYEGS-TPSRNDVRNKLAAMLNAPLELLVIQRIKTEYGM 61
Query: 232 GKSTGFA 252
+S G+A
Sbjct: 62 QESKGYA 68
>UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein
S24e - Thermofilum pendens (strain Hrk 5)
Length = 106
Score = 34.3 bits (75), Expect = 1.5
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +1
Query: 46 ATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 225
+++R + N+L+ R++++ ++ H G T S+ ++ E L M + V T +
Sbjct: 4 SSLRIIQEKVNKLVGRRELLVEIHHQGSGTPSRRDVAEALRNMLGTGGSAIVVRKLVTRY 63
Query: 226 GGGKS 240
G G S
Sbjct: 64 GQGVS 68
>UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021262 - Anopheles gambiae
str. PEST
Length = 1960
Score = 33.5 bits (73), Expect = 2.6
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = -2
Query: 242 VDLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQTICLRANNLLVMNL 63
V PP+ V KP TN + TL +L F+ + ++ G P K+++ + + N + +
Sbjct: 6 VSCTPPRAVAKPRTNESREPTLVLLGPFTPKATVVFEGVPVGKSARRLLIVRNTNKTL-V 64
Query: 62 RVRIVAVP 39
+V + VP
Sbjct: 65 QVNLTRVP 72
>UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 204
Score = 33.5 bits (73), Expect = 2.6
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 255 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 371
+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 58 VYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain protein;
n=1; Microscilla marina ATCC 23134|Rep: Von Willebrand
factor type A domain protein - Microscilla marina ATCC
23134
Length = 1088
Score = 32.7 bits (71), Expect = 4.5
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -2
Query: 266 CVVDKANPVDLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQ 105
C D LPPPK V+K +TN GV + + F+ +++L + G +S+
Sbjct: 875 CDCDSYKIKQLPPPKIVIKTDTN-YQGVNMTSMKGFAHNNLMLLLDVSGSMSSK 927
>UniRef50_Q4UH33 Cluster: Putative uncharacterized protein; n=4;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 5145
Score = 32.7 bits (71), Expect = 4.5
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +3
Query: 180 GYSRCSVRIRFQDKLRRWQVNWIRFIYDTLDLAKKFEPKHRLARHGLYE 326
GY+ C V + ++ R + +I+FI +L KK++P LA++ L++
Sbjct: 2289 GYTLCDVYLDLSNEFRINRAKFIKFIKMSLISDKKYQPLLNLAKNSLFD 2337
>UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 548
Score = 32.3 bits (70), Expect = 6.0
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -1
Query: 390 YRGPSSFCSYVLYAVC--AWASSSRTGRGGLTCAWARTSWP 274
Y S C L+A C WA +++ +TC W R WP
Sbjct: 452 YDDSLSGCGRPLHAECFRMWAVTAKKSGKDVTCVWCRNEWP 492
>UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S24e -
Nanoarchaeum equitans
Length = 94
Score = 32.3 bits (70), Expect = 6.0
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +1
Query: 76 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 228
N+L R + + V HP + T ++ E +EK+A+M V + + + + +G
Sbjct: 12 NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNVDKNKLVIKKIVSKYG 62
>UniRef50_UPI00015529D0 Cluster: PREDICTED: similar to DNA-directed
RNA polymerase II largest subunit; n=7; Theria|Rep:
PREDICTED: similar to DNA-directed RNA polymerase II
largest subunit - Mus musculus
Length = 354
Score = 31.9 bits (69), Expect = 7.9
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +3
Query: 123 RKTNRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRRWQVNWI--RFIYDTLDLAKKFEPK 296
R+ R+++R+ R+N + R R R + WQ + + KK + K
Sbjct: 206 REREREREREREREREN-EKRERERERERLSEDAAEWQKKKLGKEEEEEKKKKKKKKKKK 264
Query: 297 HRLARHGLYEKKRPTRKQRKERKNRMKK 380
+ + EKK+ T+K+ +E K +MKK
Sbjct: 265 KKKKKKKKEEKKKKTKKEEEEEKKKMKK 292
>UniRef50_UPI00005864EC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 234
Score = 31.9 bits (69), Expect = 7.9
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +3
Query: 201 RIRFQDKLRRWQVNWIRFIYDTLDLAKKFEPK-HRLARHGLYEKKRPTRKQRKERKNRMK 377
RI+ + ++W+ N + I D ++FE R+A G+ + +KQ+K R++++K
Sbjct: 81 RIKEKQSRKKWE-NMSKVIPKVTD--REFEKSLQRIATKGVVQLFNAVKKQQKTREDKLK 137
Query: 378 KVRGT 392
KV G+
Sbjct: 138 KVGGS 142
>UniRef50_Q1FH35 Cluster: Resolvase-like:Recombinase; n=1;
Clostridium phytofermentans ISDg|Rep:
Resolvase-like:Recombinase - Clostridium phytofermentans
ISDg
Length = 444
Score = 31.9 bits (69), Expect = 7.9
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 168 QNVQGYSRCSVRIRF-QDKLRRWQVNWIRFIYDTLDLAKKFEPKHRLARHGLYEKKRPTR 344
+N Y RCS R+ +DK+ + +N I+ +YDT + + K++ +H K +
Sbjct: 295 RNAATYHRCSNRLSIREDKIELYLLNNIQLLYDTHVEKLRIQKKNKKKKHIDKSKIKLKL 354
Query: 345 KQRKE 359
K+ KE
Sbjct: 355 KKLKE 359
>UniRef50_Q14QN3 Cluster: Hypothetical abc transporter permease
component transmembrane protein; n=1; Spiroplasma
citri|Rep: Hypothetical abc transporter permease
component transmembrane protein - Spiroplasma citri
Length = 1415
Score = 31.9 bits (69), Expect = 7.9
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 85 LARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTG 246
L + +V D L+ GK +KT+I K A +Y + + +F F G S G
Sbjct: 783 LTKNSLVSDYLYNGKWLSTKTDISAKNAHLYAQQLNNMIIFNFMVGKGASLSIG 836
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,470,038
Number of Sequences: 1657284
Number of extensions: 9461261
Number of successful extensions: 31172
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 29717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31043
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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