Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10567X
(405 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 94 1e-18
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 79 3e-14
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 71 9e-12
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 70 2e-11
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 66 3e-10
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 63 2e-09
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 61 7e-09
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 59 3e-08
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 55 6e-07
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 54 8e-07
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 54 1e-06
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 54 1e-06
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 50 1e-05
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 50 2e-05
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 44 9e-04
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 40 0.019
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 40 0.025
UniRef50_Q1DQH6 Cluster: Putative uncharacterized protein; n=1; ... 39 0.033
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 37 0.13
UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2; ... 36 0.41
UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1; ... 34 1.2
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 34 1.2
UniRef50_UPI00005864EC Cluster: PREDICTED: hypothetical protein;... 33 1.6
UniRef50_UPI0000ECC867 Cluster: UPI0000ECC867 related cluster; n... 33 2.2
UniRef50_Q7RYY8 Cluster: Putative uncharacterized protein NCU064... 33 2.2
UniRef50_UPI000155D0A9 Cluster: PREDICTED: hypothetical protein;... 32 3.8
UniRef50_Q550U2 Cluster: Putative uncharacterized protein; n=2; ... 32 3.8
UniRef50_Q4UH33 Cluster: Putative uncharacterized protein; n=4; ... 32 3.8
UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella ... 32 3.8
UniRef50_UPI0000E87BEA Cluster: hypothetical protein MB2181_0082... 32 5.0
UniRef50_Q0JH41 Cluster: Os01g0885300 protein; n=4; Oryza sativa... 32 5.0
UniRef50_Q96RT9 Cluster: HBV preS1(21-47) binding protein; n=9; ... 32 5.0
UniRef50_UPI0001552B5E Cluster: PREDICTED: hypothetical protein;... 31 6.6
UniRef50_UPI00006A2810 Cluster: UPI00006A2810 related cluster; n... 31 6.6
UniRef50_A0NNP8 Cluster: Bacterial regulatory protein LysR, HTH ... 31 6.6
UniRef50_A3BW45 Cluster: Putative uncharacterized protein; n=2; ... 31 6.6
UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, wh... 31 6.6
UniRef50_Q6ZRT7 Cluster: CDNA FLJ46115 fis, clone TESTI2037085; ... 31 6.6
UniRef50_UPI0001552952 Cluster: PREDICTED: hypothetical protein;... 31 8.7
UniRef50_Q4SD05 Cluster: Chromosome 14 SCAF14645, whole genome s... 31 8.7
UniRef50_Q1FH35 Cluster: Resolvase-like:Recombinase; n=1; Clostr... 31 8.7
UniRef50_Q8IK75 Cluster: Putative uncharacterized protein; n=1; ... 31 8.7
UniRef50_Q7RG31 Cluster: Putative uncharacterized protein PY0452... 31 8.7
UniRef50_Q7RF49 Cluster: Ribosomal protein L34e, putative; n=5; ... 31 8.7
UniRef50_A7EPM3 Cluster: Putative uncharacterized protein; n=1; ... 31 8.7
UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3; Methan... 31 8.7
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 93.9 bits (223), Expect = 1e-18
Identities = 40/59 (67%), Positives = 51/59 (86%)
Frame = +3
Query: 78 QIVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 254
+++ +QMV +VLHPGK TV KTEIR+KL KMYK TPDV+FVFGF+T+FGGGK+TGF +
Sbjct: 16 RLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGM 74
Score = 89.8 bits (213), Expect = 2e-17
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = +2
Query: 254 VYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 400
+YD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 75 IYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Score = 31.9 bits (69), Expect = 5.0
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 49 TIRTRKFMTNRLLARNR 99
TIRTRKFMTNRLL R +
Sbjct: 6 TIRTRKFMTNRLLQRKQ 22
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 79.4 bits (187), Expect = 3e-14
Identities = 33/54 (61%), Positives = 45/54 (83%)
Frame = +3
Query: 93 QQMVCEVLHPGKPTVSKTEIRDKLDKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 254
+QMV ++LHPG+ +S +IR++L K YK +PD+VF FGF+T+FGGGKSTGFAL
Sbjct: 21 RQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFRTHFGGGKSTGFAL 74
Score = 39.1 bits (87), Expect = 0.033
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 254 VYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 370
VYD+LD AKKFEP++RL R + P R++ +ER +
Sbjct: 75 VYDSLDHAKKFEPRYRLIRVKWVAGRHPQRQKVEERTQK 113
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 70.9 bits (166), Expect = 9e-12
Identities = 31/60 (51%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 QIVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKV-TPDVVFVFGFKTNFGGGKSTGFAL 254
+++ +Q V EVLHPG+ VSK ++++KL K+Y+V + +FVF F+T+FGGGKSTGF L
Sbjct: 21 RLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHFGGGKSTGFGL 80
Score = 42.3 bits (95), Expect = 0.004
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 311 HGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
+GL K +RKQ KERKNR KK+RG KK+K
Sbjct: 128 NGLATKVEKSRKQMKERKNRAKKIRGVKKTK 158
Score = 33.5 bits (73), Expect = 1.6
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 4/28 (14%)
Frame = +1
Query: 31 MSEGRA----TIRTRKFMTNRLLARNRW 102
MSE +A T+RTRKFMTNRLL+R ++
Sbjct: 1 MSESKAAAAVTLRTRKFMTNRLLSRKQF 28
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 70.1 bits (164), Expect = 2e-11
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = +2
Query: 254 VYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
+YDT++ AKKFEPK+RL R+GL K +RKQ KERKNR KK+RG KK+K
Sbjct: 77 IYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIRGVKKTK 126
Score = 69.7 bits (163), Expect = 2e-11
Identities = 29/60 (48%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 QIVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKV-TPDVVFVFGFKTNFGGGKSTGFAL 254
+++ +Q V +VLHPG+ VSK E+++KL +MY+V P+ +F F F+T+FGGGKS+G+ L
Sbjct: 17 RLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCFKFRTHFGGGKSSGYGL 76
Score = 35.5 bits (78), Expect = 0.41
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +1
Query: 31 MSEGRATIRTRKFMTNRLLARNRW 102
M+E TIRTR FMTNRLLAR ++
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQF 24
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 66.1 bits (154), Expect = 3e-10
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = +3
Query: 81 IVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 254
++ +Q+ +VLHP PT SK +IR++L K KV V V+GF T +GGGKSTGFAL
Sbjct: 15 LLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQYGGGKSTGFAL 72
Score = 35.1 bits (77), Expect = 0.54
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 254 VYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
VYD K+EP +RL + + +K TR+ KE K ++K+ G +K
Sbjct: 73 VYDNQQYLLKYEPNYRLRKVKILGEKPNTRRSFKELKRKIKRTSGKAITK 122
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 63.3 bits (147), Expect = 2e-09
Identities = 28/50 (56%), Positives = 37/50 (74%)
Frame = +2
Query: 254 VYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
+YD +D KKFEPKHRL R GL + + +RK KE+KNR+KK+RG K+K
Sbjct: 83 IYDNIDAFKKFEPKHRLIRAGLKDAVQKSRKNIKEKKNRVKKLRGGAKNK 132
Score = 62.5 bits (145), Expect = 3e-09
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 9/63 (14%)
Frame = +3
Query: 93 QQMVCEVLHPGKPTVSKT--------EIRDKLDKMYKVTPD-VVFVFGFKTNFGGGKSTG 245
Q +C+VLHPG+ VSK E+++K+ KMY V+ + V +FGF+T FGGGKSTG
Sbjct: 20 QSQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDEKCVSIFGFRTAFGGGKSTG 79
Query: 246 FAL 254
F L
Sbjct: 80 FGL 82
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 61.3 bits (142), Expect = 7e-09
Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 QQMVCEVLHPGKPTVSKTEIRDKLDKMYKV-TPDVVFVFGFKTNFGGGKSTGFAL 254
+Q E+LHP K +V+K E++++L KMYK+ + + +FGFKT FGGG++ GF L
Sbjct: 21 KQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLFGGGRTKGFGL 75
Score = 56.8 bits (131), Expect = 2e-07
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +2
Query: 254 VYDTLDLAKKFEPKHRLARHGLYEKK-RPTRKQRKERKNRMKKVRGTKKSK 403
+Y +D KKFE K+RL R GL +K+ + R+ KE KNR KKVRGT+K+K
Sbjct: 76 IYKNVDAVKKFEKKYRLVREGLIDKETKAGRRASKELKNRRKKVRGTEKTK 126
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 59.3 bits (137), Expect = 3e-08
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +3
Query: 63 QVHDQQIVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKV-TPDVVFVFGFKTNFGGGKS 239
Q + ++ +Q V +V+HP VSK++++ KL K+YKV + + +FGFKT FGGG+S
Sbjct: 38 QFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFKTAFGGGRS 97
Query: 240 TGFAL 254
+GF +
Sbjct: 98 SGFCV 102
Score = 54.8 bits (126), Expect = 6e-07
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +2
Query: 185 SRCSVRIRFQDKLRRWQVNWIRFVYDTLDLAKKFEPKHRLARHGLYEKKRPT-RKQRKER 361
+ C V F+ + + +Y+ + KKFE ++R R G+ EK T RK RKE
Sbjct: 80 ANCIVLFGFKTAFGGGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEKVTATGRKGRKET 139
Query: 362 KNRMKKVRGTKKSK 403
KNR KKVRGT+K+K
Sbjct: 140 KNRRKKVRGTEKAK 153
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 54.8 bits (126), Expect = 6e-07
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +2
Query: 251 FVYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKK 397
FVYD+LD KK EPKHRL + GL EK + TR+ RK + + KV G+ K
Sbjct: 73 FVYDSLDALKKTEPKHRLIKAGLAEKGKVTRRMRKNARRQKVKVWGSGK 121
Score = 49.2 bits (112), Expect = 3e-05
Identities = 20/57 (35%), Positives = 35/57 (61%)
Frame = +3
Query: 78 QIVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKVTPDVVFVFGFKTNFGGGKSTGF 248
+++ +Q V ++ H G ++ EI+D++ K D+V +FG +T FGGG +TGF
Sbjct: 15 KLLDRKQFVIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGLETKFGGGHTTGF 71
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 54.4 bits (125), Expect = 8e-07
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 QQMVCEVLHPGKPTVSKTEIRDKLDKMYKVTP-DVVFVFGFKTNFGGGKSTGFAL 254
+Q+V ++ HPG TEI++KL KMYKV + + GF T +GGGK++GFAL
Sbjct: 24 KQVVVDIYHPGIVQPKFTEIKEKLAKMYKVKDVQTIVLNGFVTKYGGGKTSGFAL 78
Score = 48.8 bits (111), Expect = 4e-05
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +2
Query: 254 VYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
+YDTL KKF PKH+L R GL +K + RK RKE K + + K K
Sbjct: 79 IYDTLSALKKFVPKHQLIRAGLDKKTKAPRKARKEHKKKWRMCHSFKDYK 128
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 54.0 bits (124), Expect = 1e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = +3
Query: 60 SQVHDQQIVGAQQMVCEVLHPGK-PTVSKTEIRDKLDKMYKVTPDV--VFVFGFKTNFGG 230
SQ +++ +Q + EV HP TV IR KL +YKV PD V +FGFKT FGG
Sbjct: 15 SQFKVNKLLNRKQFIVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQVSLFGFKTKFGG 73
Query: 231 GKSTGFAL 254
GK+TGF L
Sbjct: 74 GKTTGFGL 81
Score = 53.2 bits (122), Expect = 2e-06
Identities = 26/65 (40%), Positives = 35/65 (53%)
Frame = +2
Query: 209 FQDKLRRWQVNWIRFVYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 388
F+ K + +YD L K+FEP +R R G + + P RK KER+NR KK+RG
Sbjct: 67 FKTKFGGGKTTGFGLIYDDLASLKRFEPNYRKTRMGFGKARLPARKSVKERRNRNKKLRG 126
Query: 389 TKKSK 403
K K
Sbjct: 127 KAKGK 131
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 54.0 bits (124), Expect = 1e-06
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +3
Query: 93 QQMVCEVLHPGKPTVSKTEIRDKLDKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 254
+Q+ E+LHP KPT S+ + +L YK V V+G +T FGG ++TGFAL
Sbjct: 52 RQLSVELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRTTFGGNRTTGFAL 105
Score = 52.4 bits (120), Expect = 3e-06
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +2
Query: 254 VYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
+YDT KFEPK RL R G+ K+ +RK KE K+++KK RG +K+K
Sbjct: 106 IYDTQQYLLKFEPKFRLRRRGIIPKRDGSRKGWKEVKSKLKKTRGAEKTK 155
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 50.4 bits (115), Expect = 1e-05
Identities = 19/64 (29%), Positives = 40/64 (62%)
Frame = +3
Query: 60 SQVHDQQIVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKVTPDVVFVFGFKTNFGGGKS 239
++V + +++G +++ E+ HPG+PT S+ +++ KL M + P+ + ++ FG KS
Sbjct: 6 TEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGSYKS 65
Query: 240 TGFA 251
G+A
Sbjct: 66 KGYA 69
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +2
Query: 251 FVYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTK 394
++Y L+ A+ EPKHRL ++ L + + + KQRKE+KN+MKK G K
Sbjct: 78 YIYYNLEAARVNEPKHRLIKNNLMKLELQSSKQRKEKKNKMKKYFGNK 125
Score = 41.5 bits (93), Expect = 0.006
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 93 QQMVCEVLHPGKPTVSKTEIRDKLDKMYKVT-PDVVFVFGFKTNFGGGKSTGF 248
+Q + + K +SK +R +L K Y++ P ++F+FG K NFGG K + F
Sbjct: 24 KQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNFGGFKCSAF 76
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 44.4 bits (100), Expect = 9e-04
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +3
Query: 60 SQVHDQQIVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKVTPDVVFVFGFKTNFGGGKS 239
+ + D +++ +++ HPG P SK EIR+K+ ++Y+ D V V K +G ++
Sbjct: 3 ADLRDNRLLSRKELDVVAYHPGMPIPSKEEIREKISELYQTKKDNVVVMDLKNRYGTHRT 62
Query: 240 T 242
T
Sbjct: 63 T 63
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 39.9 bits (89), Expect = 0.019
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 99 MVCEVLHPGKPTVSKTEIRDKLDKMYKVTPDVV 197
MV EV+ PG+PT K +IR+K+ Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 39.5 bits (88), Expect = 0.025
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = -2
Query: 233 ATSEVCLETEYEHYIGSNLVHFVELVTDLGLADGWFSWM*NFANHLL 93
ATS+V +T++++ I LVH +L +D L D F+WM +HLL
Sbjct: 69 ATSKVSPKTKHKNNIWGCLVHLCQLFSDFSLGDSSFAWMKYINDHLL 115
Score = 33.9 bits (74), Expect = 1.2
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = -3
Query: 388 TADLLHSVLTFFTLFARGPLLLVQAVAG*PVLGLELLGQIECVVDKANPVDLPPPKFVLK 209
T LHSVL FFTL + LL++ + G V L L ++ VVD A K +
Sbjct: 17 TPYFLHSVLAFFTLLSGSLFLLIKPMLGKSVFRLILFCIVKRVVDHAKACSFATSK--VS 74
Query: 208 PNTNTTSGV 182
P T + +
Sbjct: 75 PKTKHKNNI 83
>UniRef50_Q1DQH6 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 490
Score = 39.1 bits (87), Expect = 0.033
Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Frame = +1
Query: 79 RLLARNR-WFA-KFYIQENQPSARPRSVTSSTKCTRL-LPM*CSYSVSR----QTSEVAS 237
+LLA+N W + +FY+Q+ QP ++ T L L + CS S+++ ++ E A+
Sbjct: 177 KLLAKNDIWVSVRFYLQKMQPVKMNYNIHDQKLLTILALLLDCSRSLAKTDNKKSCETAN 236
Query: 238 QLDSLCLRHTRSGQEVRAQAQVSPPRPVREEEAHAQ 345
QL + + + ++++ AQVSP + +EE+ +AQ
Sbjct: 237 QLRVMVTKKQETTEKLKLIAQVSPNQREKEEDENAQ 272
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 37.1 bits (82), Expect = 0.13
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +3
Query: 42 KSDYSHSQVHDQQIVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKVTPDVVFVFGFKTN 221
K++ + + +++G +++ +V H G PT S+ +IR + D+V + T
Sbjct: 12 KAEALVENLKENKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKEDLVVIRKINTG 71
Query: 222 FGGGKS 239
+G G S
Sbjct: 72 YGAGIS 77
>UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 326
Score = 35.5 bits (78), Expect = 0.41
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 241 LDSLCLRHTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGPRYQE 396
L + +RH R+ + + + PP+PV+E E + A EQ EE P +E
Sbjct: 108 LSKITVRHPRNTEPFKELNPLLPPKPVKEGEEEEEKAEEEEEQKEEEPENEE 159
>UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 204
Score = 33.9 bits (74), Expect = 1.2
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 254 VYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 370
VYDT D A K++P+H + H R + +RKE++ R
Sbjct: 58 VYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 33.9 bits (74), Expect = 1.2
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +3
Query: 66 VHDQQIVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKVTPDVVFVFGFKTNFGGGKS 239
+ + +++ ++++ E +H T ++ +R+ + K + VFV KT FG G+S
Sbjct: 11 IRENKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFVRRIKTEFGRGRS 68
>UniRef50_UPI00005864EC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 234
Score = 33.5 bits (73), Expect = 1.6
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +2
Query: 200 RIRFQDKLRRWQVNWIRFVYDTLDLAKKFEPK-HRLARHGLYEKKRPTRKQRKERKNRMK 376
RI+ + ++W+ N + + D ++FE R+A G+ + +KQ+K R++++K
Sbjct: 81 RIKEKQSRKKWE-NMSKVIPKVTD--REFEKSLQRIATKGVVQLFNAVKKQQKTREDKLK 137
Query: 377 KVRGTKKSK 403
KV G+++ +
Sbjct: 138 KVGGSQRKR 146
>UniRef50_UPI0000ECC867 Cluster: UPI0000ECC867 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECC867 UniRef100 entry -
Gallus gallus
Length = 219
Score = 33.1 bits (72), Expect = 2.2
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 323 EKKRPTRKQRKERKNRMKKVRGTKKSK 403
E+KR RK+RKERK + KK + K+ K
Sbjct: 62 ERKRKERKERKERKRKKKKEKERKRKK 88
>UniRef50_Q7RYY8 Cluster: Putative uncharacterized protein
NCU06427.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU06427.1 - Neurospora crassa
Length = 197
Score = 33.1 bits (72), Expect = 2.2
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +2
Query: 230 WQV-NWIRFVYDTLD--LAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 400
W+ +WI Y +++ + K PK + + +KK+ +K++K++K + KK + KK
Sbjct: 105 WRTRSWITSGYVSMERTVMNKSNPKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKK 164
Query: 401 K 403
K
Sbjct: 165 K 165
>UniRef50_UPI000155D0A9 Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 214
Score = 32.3 bits (70), Expect = 3.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 278 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
+K E K R E+KR ++++KERK R K+ + KK +
Sbjct: 97 RKRERKRERKRERKRERKRERKREKKERKERKKEKKERKKER 138
>UniRef50_Q550U2 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 378
Score = 32.3 bits (70), Expect = 3.8
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -2
Query: 260 RRQSESS*LATSEVCLETEYEHYIGSNLVHFVELVTDLGLADGWFSWM*NFANHLLRANN 81
+R+ + LATS++ +E E +H + + FV ++ +GL W W N + N
Sbjct: 133 KRKRIQNILATSKIFIEGEKKHEVRLTIFLFVNILVFMGLKFVWVYWR-NHQYGDMPCNG 191
Query: 80 LLV-MNLRVRIVALPSLILNYF 18
L V + +V+ SLI+ +F
Sbjct: 192 LNVHLLFGTNMVSSISLIVQFF 213
>UniRef50_Q4UH33 Cluster: Putative uncharacterized protein; n=4;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 5145
Score = 32.3 bits (70), Expect = 3.8
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +2
Query: 179 GYSRCSVRIRFQDKLRRWQVNWIRFVYDTLDLAKKFEPKHRLARHGLYE 325
GY+ C V + ++ R + +I+F+ +L KK++P LA++ L++
Sbjct: 2289 GYTLCDVYLDLSNEFRINRAKFIKFIKMSLISDKKYQPLLNLAKNSLFD 2337
>UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 548
Score = 32.3 bits (70), Expect = 3.8
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -2
Query: 389 YRGPSSFCSYVLYAVC--AWASSSRTGRGGLTCAWARTSWP 273
Y S C L+A C WA +++ +TC W R WP
Sbjct: 452 YDDSLSGCGRPLHAECFRMWAVTAKKSGKDVTCVWCRNEWP 492
>UniRef50_UPI0000E87BEA Cluster: hypothetical protein MB2181_00825;
n=1; Methylophilales bacterium HTCC2181|Rep:
hypothetical protein MB2181_00825 - Methylophilales
bacterium HTCC2181
Length = 217
Score = 31.9 bits (69), Expect = 5.0
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 135 RLVFLDVKLRKPSVARQQSVGHELASANSRSSFTHFELFSIIRRL 1
RL+++D+K P + ++ S+ H L +N S ++ LF I L
Sbjct: 61 RLLYIDIKGESPQIVKEGSITHRLMRSNKPGSQSNLWLFGGIGNL 105
>UniRef50_Q0JH41 Cluster: Os01g0885300 protein; n=4; Oryza
sativa|Rep: Os01g0885300 protein - Oryza sativa subsp.
japonica (Rice)
Length = 573
Score = 31.9 bits (69), Expect = 5.0
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 133 PSARPRSVTSSTKCTRLLPM*CSYSVSRQTSEVASQLDSLCLRHTRSGQEVRAQAQVSPP 312
P+ P ++ ST+ +L + R+ S +SQ S+ RH + + ++ A VS P
Sbjct: 282 PNVAPHKMSGSTERNKLTT---KQTGVRRPSSASSQRPSVGERHRIARESIKKPADVSTP 338
Query: 313 RPVREEEAHAQTA*RT*EQNE-EGPR 387
R E H T R +Q + + PR
Sbjct: 339 RRPSTAERHPVTTERARKQADVDTPR 364
>UniRef50_Q96RT9 Cluster: HBV preS1(21-47) binding protein; n=9;
Eukaryota|Rep: HBV preS1(21-47) binding protein - Homo
sapiens (Human)
Length = 42
Score = 31.9 bits (69), Expect = 5.0
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 323 EKKRPTRKQRKERKNRMKKVRGTKKSK 403
E+K+ +K++KERK R KK + KK K
Sbjct: 6 ERKKERKKEKKERKKRKKKEKERKKEK 32
>UniRef50_UPI0001552B5E Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 181
Score = 31.5 bits (68), Expect = 6.6
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 287 EPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
E K + + EKK K+ KE+K +MKK + KK K
Sbjct: 64 EKKEKKEKKEKKEKKEKKEKKEKEKKEKMKKKKKKKKKK 102
>UniRef50_UPI00006A2810 Cluster: UPI00006A2810 related cluster; n=2;
Xenopus tropicalis|Rep: UPI00006A2810 UniRef100 entry -
Xenopus tropicalis
Length = 260
Score = 31.5 bits (68), Expect = 6.6
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +1
Query: 133 PSARPRSVTSSTKCTRLLPM*CSYSVSRQTSEVASQLDSLCLRHTRSGQEVRAQAQVSPP 312
P A ++ K R+L Y + E+A+QLD VRA A V P
Sbjct: 163 PVAEVLYFEAADKYVRVLTAAREYLIRTPLKELAAQLDPAVFWQVHRSTLVRASAMVRPH 222
Query: 313 RPVR---EEEAHAQTA*RT*EQNEE 378
R V +E+ HA R +Q E+
Sbjct: 223 RAVHGRGDEQRHALHRPRQTQQREQ 247
>UniRef50_A0NNP8 Cluster: Bacterial regulatory protein LysR, HTH
motif:LysR substrate binding domain; n=1; Stappia
aggregata IAM 12614|Rep: Bacterial regulatory protein
LysR, HTH motif:LysR substrate binding domain - Stappia
aggregata IAM 12614
Length = 293
Score = 31.5 bits (68), Expect = 6.6
Identities = 21/84 (25%), Positives = 41/84 (48%)
Frame = +1
Query: 79 RLLARNRWFAKFYIQENQPSARPRSVTSSTKCTRLLPM*CSYSVSRQTSEVASQLDSLCL 258
R + R++ Y+ E + R + +T+ L + +Y ++ SE+ ++D L
Sbjct: 18 REMGRSKALVSKYVGELEDELGVRLLNRTTRQVSLTEVGEAYY--KEASEILQRIDDLQA 75
Query: 259 RHTRSGQEVRAQAQVSPPRPVREE 330
S QEVR + +VS PR + ++
Sbjct: 76 SVQSSHQEVRGRLRVSAPRSMGDD 99
>UniRef50_A3BW45 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 236
Score = 31.5 bits (68), Expect = 6.6
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 115 YIQENQPSARPRSVTSSTK 171
+IQENQP+ARP +T+STK
Sbjct: 180 FIQENQPTARPVVLTTSTK 198
>UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_96,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 31.5 bits (68), Expect = 6.6
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2
Query: 278 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
KK+E K+ + G +K + +K++K +KN+ KK + KKSK
Sbjct: 245 KKYEKKNSEEK-GKEKKIKKEKKEKKNKKNKDKKEKKEKKSK 285
>UniRef50_Q6ZRT7 Cluster: CDNA FLJ46115 fis, clone TESTI2037085;
n=6; Fungi/Metazoa group|Rep: CDNA FLJ46115 fis, clone
TESTI2037085 - Homo sapiens (Human)
Length = 148
Score = 31.5 bits (68), Expect = 6.6
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +2
Query: 278 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
KK + K + + +KK+ +K++K++KN+ KK + KK K
Sbjct: 37 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKK 78
>UniRef50_UPI0001552952 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 210
Score = 31.1 bits (67), Expect = 8.7
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 278 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
KK + K + + +KK+ +K++KE+K + KK + KK K
Sbjct: 85 KKKKKKKKKKKKKKKKKKKKKKKEKKEKKKKKKKKKKKKKKK 126
>UniRef50_Q4SD05 Cluster: Chromosome 14 SCAF14645, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 14 SCAF14645, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 2287
Score = 31.1 bits (67), Expect = 8.7
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +1
Query: 172 CTRLLPM*CSYSVSRQTSEVASQLDSLCLRHTRSGQEVRAQAQVSPPRPVREEEAHAQTA 351
C R LP+ + R+ + +D LCLR + R +A PRP A AQ +
Sbjct: 2119 CRRALPVLRPRPLRREEGQTVVGVD-LCLRRGAEPRWSRRRASTGAPRP-SPRSASAQRS 2176
Query: 352 *RT*EQNEE 378
+T E+ EE
Sbjct: 2177 AQTQEEEEE 2185
>UniRef50_Q1FH35 Cluster: Resolvase-like:Recombinase; n=1;
Clostridium phytofermentans ISDg|Rep:
Resolvase-like:Recombinase - Clostridium phytofermentans
ISDg
Length = 444
Score = 31.1 bits (67), Expect = 8.7
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 170 NVQGYSRCSVRIRF-QDKLRRWQVNWIRFVYDTLDLAKKFEPKHRLARHGLYEKKRPTRK 346
N Y RCS R+ +DK+ + +N I+ +YDT + + K++ +H K + K
Sbjct: 296 NAATYHRCSNRLSIREDKIELYLLNNIQLLYDTHVEKLRIQKKNKKKKHIDKSKIKLKLK 355
Query: 347 QRKE 358
+ KE
Sbjct: 356 KLKE 359
>UniRef50_Q8IK75 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 375
Score = 31.1 bits (67), Expect = 8.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 278 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTK 394
+K + K R + E+KR ++Q KERKN+ K + TK
Sbjct: 330 EKEKEKQRKQKEQEKERKRKEKEQEKERKNKENKKKETK 368
>UniRef50_Q7RG31 Cluster: Putative uncharacterized protein PY04520;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY04520 - Plasmodium yoelii yoelii
Length = 400
Score = 31.1 bits (67), Expect = 8.7
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 278 KKFEPKHRLARHGLYEKKRPTRKQRKER-KNRMKKVRGTKKSK 403
KK K++ R G KK P +KQ+K R KN+ + + TKK+K
Sbjct: 18 KKNRKKNK-KRTGKKTKKEPEKKQKKNRKKNKKRTEKKTKKNK 59
>UniRef50_Q7RF49 Cluster: Ribosomal protein L34e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L34e, putative -
Plasmodium yoelii yoelii
Length = 164
Score = 31.1 bits (67), Expect = 8.7
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 293 KHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
K R+ R L+E+++ R+ KE+K + +KV+ KK K
Sbjct: 86 KERIMRAFLFEEQKCVRQVLKEKKKQEQKVKKVKKEK 122
>UniRef50_A7EPM3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 803
Score = 31.1 bits (67), Expect = 8.7
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +2
Query: 245 IRFVYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
IR +L + KF ++ GL ++K+ +++RKE+K K+ R +KS+
Sbjct: 742 IRTKKKSLKVKWKFHGRNWKEETGLCDEKKGGKRERKEKKRERKRERKEEKSR 794
>UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S24e -
Methanobacterium thermoautotrophicum
Length = 100
Score = 31.1 bits (67), Expect = 8.7
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +3
Query: 72 DQQIVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKVTPDVVFVFGFKTNFGGGKSTGFA 251
+ ++ +++ E L+ G+ T E+++KL M D++ V FG ++TG+A
Sbjct: 10 ENPLLNRKEIRFECLYEGESTPKVLEVKNKLVAMLDADKDLLVVDKIDQGFGEPRATGYA 69
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,344,711
Number of Sequences: 1657284
Number of extensions: 8014696
Number of successful extensions: 30553
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 28551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30335
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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