Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10567X
(405 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0550 - 30151494-30151526,30151620-30151706,30152458-301526... 75 3e-14
02_02_0153 - 7258002-7258034,7258137-7258223,7258991-7259161,725... 73 7e-14
06_03_0440 + 20815528-20815653,20815742-20815912,20816501-208165... 71 4e-13
01_06_1585 - 38448403-38448512,38448836-38448916,38449388-384494... 32 0.20
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581... 30 0.61
04_01_0254 + 3388215-3388553,3388869-3390830 29 1.1
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 29 1.1
01_01_0502 - 3688940-3689149,3689180-3689251,3690028-3690064,369... 29 1.4
01_06_0733 - 31563246-31563462,31563721-31563947,31563983-315640... 28 2.4
07_01_0796 + 6265106-6265304,6265723-6265963,6266063-6266423 28 3.2
11_04_0350 - 16658497-16659015 27 4.3
07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455... 27 4.3
06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,890... 27 4.3
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 27 4.3
01_05_0740 - 24809951-24810394,24810622-24810700,24811651-248118... 27 4.3
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 27 5.6
01_03_0260 - 14323503-14323603,14323751-14323990,14324212-143242... 27 5.6
09_03_0188 + 13266080-13266329,13268124-13268201,13268274-132683... 27 7.5
09_03_0108 + 12421719-12421749,12422794-12422892,12423370-12423890 27 7.5
02_01_0668 - 4969141-4970520,4970597-4971463 27 7.5
01_05_0540 + 23069954-23070103,23070170-23070251,23070298-230703... 27 7.5
09_03_0140 + 12700740-12700935,12701082-12701515 26 9.9
01_01_0200 + 1737965-1738492 26 9.9
>01_06_0550 -
30151494-30151526,30151620-30151706,30152458-30152628,
30152716-30152757,30152856-30152939
Length = 138
Score = 74.5 bits (175), Expect = 3e-14
Identities = 32/60 (53%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 QIVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKV-TPDVVFVFGFKTNFGGGKSTGFAL 254
+++ +Q V EV+HPG+P VSK E+++KL K+Y+V + +FVF F+T+FGGGKSTGF L
Sbjct: 21 RLLSRKQFVLEVIHPGRPNVSKAELKEKLAKLYEVKDANCIFVFKFRTHFGGGKSTGFGL 80
Score = 72.1 bits (169), Expect = 2e-13
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +2
Query: 254 VYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
+YD LD AKK+EPK+RL R+GL K +RKQ KERKNR KK+RG KK+K
Sbjct: 81 IYDNLDAAKKYEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRGVKKTK 130
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 49 TIRTRKFMTNRLLARNRW 102
T+RTRKFMTNRLL+R ++
Sbjct: 11 TLRTRKFMTNRLLSRKQF 28
>02_02_0153 -
7258002-7258034,7258137-7258223,7258991-7259161,
7259261-7259386
Length = 138
Score = 73.3 bits (172), Expect = 7e-14
Identities = 35/73 (47%), Positives = 45/73 (61%)
Frame = +2
Query: 185 SRCSVRIRFQDKLRRWQVNWIRFVYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERK 364
S C +F+ + +YD LD AKK+EPK+RL R+GL K +RKQ KERK
Sbjct: 58 SNCIFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIRNGLATKVEKSRKQMKERK 117
Query: 365 NRMKKVRGTKKSK 403
NR KK+RG KK+K
Sbjct: 118 NRAKKIRGVKKTK 130
Score = 70.9 bits (166), Expect = 4e-13
Identities = 31/60 (51%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 QIVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKV-TPDVVFVFGFKTNFGGGKSTGFAL 254
+++ +Q V EVLHPG+ VSK ++++KL K+Y+V + +FVF F+T+FGGGKSTGF L
Sbjct: 21 RLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHFGGGKSTGFGL 80
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 49 TIRTRKFMTNRLLARNRW 102
T+RTRKFMTNRLL+R ++
Sbjct: 11 TLRTRKFMTNRLLSRKQF 28
>06_03_0440 +
20815528-20815653,20815742-20815912,20816501-20816584,
20818831-20818917,20819044-20819076
Length = 166
Score = 70.9 bits (166), Expect = 4e-13
Identities = 31/60 (51%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 QIVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKV-TPDVVFVFGFKTNFGGGKSTGFAL 254
+++ +Q V EVLHPG+ VSK ++++KL K+Y+V + +FVF F+T+FGGGKSTGF L
Sbjct: 21 RLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHFGGGKSTGFGL 80
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 311 HGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
+GL K +RKQ KERKNR KK+RG KK+K
Sbjct: 128 NGLATKVEKSRKQMKERKNRAKKIRGVKKTK 158
Score = 33.5 bits (73), Expect = 0.065
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 4/28 (14%)
Frame = +1
Query: 31 MSEGRA----TIRTRKFMTNRLLARNRW 102
MSE +A T+RTRKFMTNRLL+R ++
Sbjct: 1 MSESKAAAAVTLRTRKFMTNRLLSRKQF 28
>01_06_1585 -
38448403-38448512,38448836-38448916,38449388-38449475,
38449571-38449666,38449823-38449879,38449960-38450466,
38450701-38451393,38451612-38451683
Length = 567
Score = 31.9 bits (69), Expect = 0.20
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 133 PSARPRSVTSSTKCTRLLPM*CSYSVSRQTSEVASQLDSLCLRHTRSGQEVRAQAQVSPP 312
P+ P ++ ST+ +L + R+ S +SQ S+ RH + + ++ A VS P
Sbjct: 281 PNVAPHKMSGSTERNKLTT---KQTGVRRPSSASSQRPSVGERHRIARESIKKPADVSTP 337
Query: 313 RPVREEEAHAQTA*RT*EQNE-EGPR 387
R E H T R +Q + + PR
Sbjct: 338 RRPSTAERHPVTTERARKQADVDTPR 363
>01_06_0575 -
30357556-30357582,30357698-30357944,30358039-30358161,
30358275-30358301,30358475-30358633,30359764-30359948,
30360225-30360293,30360432-30362354,30363018-30363339,
30363506-30363543
Length = 1039
Score = 30.3 bits (65), Expect = 0.61
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 21 IIQNE*RKSDYSHSQVHDQQIVGAQQMVCEVLHPGKPTV 137
I+Q + RK+D+S SQV ++ + G Q +V HP +PTV
Sbjct: 587 IMQGQ-RKTDFSDSQVQEKVLNGYLQQ--DVYHPCQPTV 622
>04_01_0254 + 3388215-3388553,3388869-3390830
Length = 766
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 242 WIRFVYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 379
WI + +AK FE + + G E R +RK+ +++K M++
Sbjct: 137 WISSFVCLMAIAKYFEGAYYALQRGNLENMRSSRKEEEKKKENMRR 182
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +2
Query: 323 EKKRPTRKQRKERKNRMKKVRGTKKSK 403
+KK+ +K++K++KN+ KK + KK K
Sbjct: 75 KKKKKKKKKKKKKKNKKKKKKKKKKKK 101
>01_01_0502 -
3688940-3689149,3689180-3689251,3690028-3690064,
3691224-3691705
Length = 266
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 247 SLCLRHTRSGQEVRAQAQVSPPRPVREEEAHA 342
S +R + G E AQ+ PPRPV + +HA
Sbjct: 156 SRLVRTSEHGDEQLTGAQLRPPRPVEADASHA 187
>01_06_0733 -
31563246-31563462,31563721-31563947,31563983-31564018,
31564750-31564862,31565872-31565950,31566739-31566956,
31567041-31567146,31568518-31568730
Length = 402
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 238 QLDSLCLRHTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT 360
+L S+ H RSG++ R + ++SP P R+ + R+
Sbjct: 182 ELSSVNSMHQRSGEDFRQEHEISPVAPHRDVRVYVDNVVRS 222
>07_01_0796 + 6265106-6265304,6265723-6265963,6266063-6266423
Length = 266
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 311 HGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
H EKK+ ++K+RK R KK + KKSK
Sbjct: 224 HKKKEKKKEKSSEKKDRKERRKK-KDKKKSK 253
>11_04_0350 - 16658497-16659015
Length = 172
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = +2
Query: 323 EKKRPTRKQRKERKNRMKKVRGTKK 397
+KK+ +K++K++K + KKVR T++
Sbjct: 36 KKKKKKKKKKKKKKKKKKKVRYTQE 60
>07_03_0356 -
17142019-17142899,17145251-17145290,17145381-17145512,
17145762-17145815,17145913-17145993,17146860-17146955,
17147439-17147611,17147750-17147823,17148515-17148622,
17148693-17148868,17149305-17149352,17150665-17150775,
17152172-17152226,17153434-17153534,17154176-17154290,
17155505-17155698
Length = 812
Score = 27.5 bits (58), Expect = 4.3
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 215 DKLRRWQVNWIRFVYDTLDLAKKFEPKHRLARHGLYEKKR----PTRKQRKERKNRMKKV 382
+KL+ +V ++R ++ K H++ L EKK+ RK+ +E K R K+V
Sbjct: 631 EKLQSMKVRFLRPADYYAEMVKTDAHMHKIKGRLLSEKKKIEEAEERKKAREAKKRAKEV 690
Query: 383 RGTKKSK 403
+ K+ +
Sbjct: 691 QAQKEKE 697
>06_01_1087 +
8901950-8902102,8902960-8903996,8904438-8904586,
8905437-8905690,8905785-8908799,8908889-8909001,
8909975-8910164,8910399-8910512,8910591-8910698,
8910941-8911073,8911206-8911408,8911626-8911826
Length = 1889
Score = 27.5 bits (58), Expect = 4.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 130 GFPGCKTSQTICCAPTICW 74
G P TS ++C AP +CW
Sbjct: 631 GNPVSSTSLSVCLAPLVCW 649
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 27.5 bits (58), Expect = 4.3
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +2
Query: 260 DTLDLAKKFEPKHRLA-RHGLYEK-KRPTRKQ--RKERKNRMKKVRGTKKSK 403
D+ DL+ + + R RH +K KR RK+ R+ERK R + + +KSK
Sbjct: 260 DSSDLSSSSDDRRRRRKRHSKKDKHKRGKRKRDRRRERKRRKRDRKSKQKSK 311
>01_05_0740 - 24809951-24810394,24810622-24810700,24811651-24811809,
24812083-24812246,24812436-24812624,24813151-24813408,
24813463-24813951,24814062-24814262,24814368-24814639,
24814661-24814685,24814776-24814937,24815065-24815104,
24815244-24815353,24815812-24815898,24816013-24816507
Length = 1057
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 314 GLYEKKRPTRKQRKERKNRMKK 379
G+YE++R R+Q KER+ + K
Sbjct: 999 GVYERERNMRQQEKERRKQQSK 1020
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 263 TLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTK-KSK 403
+LD + + +H+ + +K R + + K +K + +K RGTK KSK
Sbjct: 207 SLDTSSSSDHRHKRRKSSKKDKHRSAKGKSKHKKTK-RKSRGTKRKSK 253
>01_03_0260 - 14323503-14323603,14323751-14323990,14324212-14324275,
14324349-14324654,14324841-14325055,14325551-14325845,
14325965-14326129,14326324-14327352,14333553-14333814,
14334135-14334631,14338714-14340123
Length = 1527
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 82 LLARNRWFAKFYIQENQPSARPRSVTSS 165
LL N WF K+YI ++ R S+T +
Sbjct: 1113 LLMLNLWFRKYYISTSRELTRLESITKA 1140
>09_03_0188 +
13266080-13266329,13268124-13268201,13268274-13268374,
13268474-13268566,13268648-13268719,13268808-13268930,
13269143-13269412,13271154-13271204,13271325-13271513,
13271613-13271777
Length = 463
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 244 DSLCLRHTRSGQEVRAQAQVSPPRPVREEEAHAQ 345
D+LC G+E RAQ Q P V E AQ
Sbjct: 281 DTLCGDPDHQGREARAQGQQIPTHQVVEHGVQAQ 314
>09_03_0108 + 12421719-12421749,12422794-12422892,12423370-12423890
Length = 216
Score = 26.6 bits (56), Expect = 7.5
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 182 YSRCSVRIR-FQDKLRRWQVNWI 247
+ RC VR+ F KLR W ++W+
Sbjct: 134 FLRCVVRVNNFPTKLRPWDLSWL 156
>02_01_0668 - 4969141-4970520,4970597-4971463
Length = 748
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 117 HPGKPTVSKTEIRDK-LDKMYKVTPDVVFVFGFKTNFGGGKST 242
H KP K E+ + +D Y PDV+ GF + GKST
Sbjct: 489 HGYKPEKLKGEVDIRGVDFSYPSRPDVIIFKGFTLSIQPGKST 531
>01_05_0540 +
23069954-23070103,23070170-23070251,23070298-23070355,
23071276-23071318,23072262-23073341,23073448-23073509,
23073759-23073855,23074703-23074984,23075073-23075147,
23075223-23075276,23075373-23075515,23076567-23076858
Length = 805
Score = 26.6 bits (56), Expect = 7.5
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 99 MVCEVLHPGKPTVSKTEIRDKLDKMYKVTPDVVFVFGFKTNFGGGKSTGF 248
MV +V PG ++SK +I ++D + +FG T G K+ F
Sbjct: 560 MVTQVASPGNTSISKQKILARIDVCFGGAVAEELLFGEHTVTAGAKNDLF 609
>09_03_0140 + 12700740-12700935,12701082-12701515
Length = 209
Score = 26.2 bits (55), Expect = 9.9
Identities = 14/51 (27%), Positives = 19/51 (37%)
Frame = -2
Query: 350 AVCAWASSSRTGRGGLTCAWARTSWPDRVCRRQSESS*LATSEVCLETEYE 198
A W S R GRG + W CRR+ +A E + + E
Sbjct: 77 AAAGWRDSGRGGRGVVKAVARPRGWRGLPCRRRGGQRRVAVVEASVVRQRE 127
>01_01_0200 + 1737965-1738492
Length = 175
Score = 26.2 bits (55), Expect = 9.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 201 VFGFKTNFGGGKSTGFALSTTHSI 272
++GF+ GGG GFAL++ ++
Sbjct: 116 IWGFEDEIGGGGYAGFALTSPEAV 139
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,401,296
Number of Sequences: 37544
Number of extensions: 227087
Number of successful extensions: 840
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 706675332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -