Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10567X
(405 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.051
SB_50966| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_3155| Best HMM Match : C1_4 (HMM E-Value=0.16) 29 1.1
SB_18070| Best HMM Match : V-ATPase_G (HMM E-Value=4) 29 1.4
SB_44985| Best HMM Match : YhjQ (HMM E-Value=0.37) 29 1.4
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_6351| Best HMM Match : IncA (HMM E-Value=0.13) 29 1.4
SB_31| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083) 29 1.4
SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 29 1.9
SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_37093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 28 2.5
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_16395| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_13268| Best HMM Match : Glyco_transf_54 (HMM E-Value=5.6e-15) 28 3.3
SB_48095| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_4772| Best HMM Match : Peptidase_U61 (HMM E-Value=3.1) 27 5.8
SB_59072| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_38699| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_28447| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0) 27 5.8
SB_34| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_22216| Best HMM Match : PGAMP (HMM E-Value=4) 27 7.7
SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 27 7.7
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 33.9 bits (74), Expect = 0.051
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +3
Query: 69 HDQQIVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKVTPDVVFVFGFKT--NFGGGKST 242
H +Q++ ++ G T+ K + +DK+ K+T + GF +FGGG +
Sbjct: 999 HPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGS 1058
Query: 243 GFA-LSTTH 266
GFA L T H
Sbjct: 1059 GFASLITEH 1067
>SB_50966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 32.7 bits (71), Expect = 0.12
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 55 RTRKFMTNRLLARNRWFAKFYIQENQPSARPRSVTSSTKCTRLLPM*CSYSVSRQTSEVA 234
R R+ T++ A KF+I++ +P R +T+S +C RLL + S R EV
Sbjct: 46 RLRRPKTSKTSAFRVHSRKFFIRDKKPEVRNTDLTASIECERLLAIISRRSRWRPQIEVP 105
Query: 235 SQL 243
+L
Sbjct: 106 QRL 108
>SB_3155| Best HMM Match : C1_4 (HMM E-Value=0.16)
Length = 295
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 109 KFYIQENQPSARPRSVTSSTKCTRLL 186
KF+I++ +P R +T+S +C RLL
Sbjct: 15 KFFIRDKKPEVRNTDLTASIECERLL 40
>SB_18070| Best HMM Match : V-ATPase_G (HMM E-Value=4)
Length = 166
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 293 KHRLARHGLYEKKRPTRKQRKERKNRMKKVR 385
+H LA H +++RP+ R+ K R++K+R
Sbjct: 79 RHGLASHDKKKRERPSLVARERMKKRLRKIR 109
>SB_44985| Best HMM Match : YhjQ (HMM E-Value=0.37)
Length = 1376
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 266 LDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKV 382
LDL KHR RH EKK K RK +KN M+++
Sbjct: 1000 LDLLLAHATKHRGRRHRS-EKKEKANKARKCQKNYMRRL 1037
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 287 EPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
E K + + +KK+ +K++K +KN+ K + KK K
Sbjct: 16 EKKRKKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKKKKK 54
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 278 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
K+ + K + + +KK+ K+ K+ KN+ KK + KK K
Sbjct: 18 KRKKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKKKK 59
>SB_6351| Best HMM Match : IncA (HMM E-Value=0.13)
Length = 417
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 293 KHRLARHGLYEKKRPTRKQRKERKNRMKKVR 385
+H LA H +++RP+ R+ K R++K+R
Sbjct: 378 RHGLASHDKKKRERPSLVARERMKKRLRKIR 408
>SB_31| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083)
Length = 902
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 194 SVRIRFQDKLRRWQVNWIRFVYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERK 364
SVR D +R QVN +R + D + +K K + H LY + R QR++++
Sbjct: 769 SVR-HLDDNVRHLQVN-VRHLDDNVRHLQKIVSKLEESEHALYNRVRAAEMQRRKQE 823
>SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 326 KKRPTRKQRKERKNRMKKVRGTKKSK 403
KKR +KQ+K++K R KK + +K K
Sbjct: 3 KKRKKKKQKKKKKKRKKKKQKKQKKK 28
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 69 HDQQIVGAQQMVCEVLHPGKPTVSKTEIRDKLDKMYKVTPDVVFVFGFKT--NFGGGKST 242
H +Q++ ++ G T+ K I LD+ K+ + GF +FGGG +
Sbjct: 88 HPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLADQCTGLQGFLIFHSFGGGTGS 147
Query: 243 GFA 251
GFA
Sbjct: 148 GFA 150
>SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1529
Score = 28.3 bits (60), Expect = 2.5
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 MSEGRATIRTRKFMTNRLLARNRWFAKFYIQENQPSARPRSVTSSTKCTRLLPM*C-SYS 207
MSEG + + R++ +A Y+Q ++ + RP +T+ + T L M ++
Sbjct: 662 MSEGNLVVGSADTNLLRVITPEGNYAVPYLQWHRVALRPSKITNWEQLTTNLRMAIDDFN 721
Query: 208 VSRQTSEVASQLDSLCL 258
+SRQ + A Q + L L
Sbjct: 722 ISRQATRQALQQNYLDL 738
>SB_37093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -2
Query: 122 WM*NFANHLLRANNLLVMNLRVRIVALPSLILNYFQ 15
W+ +F N L A N+L ++ R+R+ A P L +N+ +
Sbjct: 63 WLRSFINAFLAALNVLALSERIRLGA-PRLAINFLR 97
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +2
Query: 278 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
+K + + RLA E+KR ++RKE++ + K++ +K +
Sbjct: 202 RKLQEEARLAAQRALEEKRKLEEERKEQERKEKELAELEKKR 243
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 226 EVASQLDSLCLRHTRSGQEVRAQAQVSPPRPVREEEAHAQTA 351
E SQL+ + + ++GQ + ++ P R V E++ H TA
Sbjct: 2394 EAVSQLEPVIAQLLKTGQAILDSSEHGPDRDVLEQKLHDTTA 2435
>SB_16395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 290 PKHRLARHGLYEKKRPTRKQRKERKNRMKK 379
P+ L H L ++ R R+QR ER++R+K+
Sbjct: 21 PQQILFTHRLEQRYRVERRQRLERRHRVKR 50
>SB_13268| Best HMM Match : Glyco_transf_54 (HMM E-Value=5.6e-15)
Length = 642
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 215 LETEYEHYIGSNLVHFVE 162
LET+Y+ +I SNL+H +E
Sbjct: 62 LETQYKKHIESNLIHVIE 79
>SB_48095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 27.1 bits (57), Expect = 5.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 121 GCKTSQTICCAPTICWS*TCEC 56
GC+T++ I CA W C+C
Sbjct: 14 GCRTARVIDCASVPSWPDWCQC 35
>SB_4772| Best HMM Match : Peptidase_U61 (HMM E-Value=3.1)
Length = 363
Score = 27.1 bits (57), Expect = 5.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 121 GCKTSQTICCAPTICWS*TCEC 56
GC+T++ I CA W C+C
Sbjct: 14 GCRTARVIDCASVPSWPDWCQC 35
>SB_59072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 361
Score = 27.1 bits (57), Expect = 5.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 121 GCKTSQTICCAPTICWS*TCEC 56
GC+T++ I CA W C+C
Sbjct: 156 GCRTARVIDCASVPSWPDWCQC 177
>SB_38699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 27.1 bits (57), Expect = 5.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 121 GCKTSQTICCAPTICWS*TCEC 56
GC+T++ I CA W C+C
Sbjct: 14 GCRTARVIDCASVPSWPDWCQC 35
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 257 RQSESS*LATSEVCLETEYEHYIGSNLVHFVELVTDLGLAD 135
RQS S +A +CLE Y H +G +H V L + +
Sbjct: 46 RQSAVSPIAHDAICLEFLYVHSVGVRHIHSAASVKRLQMLE 86
>SB_28447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 777
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 42 KSDYSHSQVHDQQIVGAQQMVCEVLHPGKPTVSKTEIRDKLD-KMYKVTPDVVF 200
+S +++ VH QQ++ + ++ P P V++ EI ++ + K V P + F
Sbjct: 269 RSGWANRNVHQQQLMTMYHKLEDLKRPFTPGVNEDEIEEECEGKSDSVVPFLTF 322
>SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0)
Length = 1127
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 281 KFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 385
KFEPKH+ + KKR +RK+ E + + + +R
Sbjct: 1060 KFEPKHK-KKGRSSSKKRHSRKKGHEEQQKKETIR 1093
>SB_34| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 299 RLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 403
R R G K P + RKE NR++KV + K
Sbjct: 59 RRGRKGHRNHKEPHNRNRKEPGNRIRKVEHNRNRK 93
>SB_22216| Best HMM Match : PGAMP (HMM E-Value=4)
Length = 132
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 353 YAVCAWASSSRTGRGGLTCAWARTSWPDRVCRRQSESS 240
Y CA S G+ C +A + PD RR + SS
Sbjct: 62 YGTCAMPDSGIPPPPGVLCRYAPCAMPDPKMRRSNRSS 99
>SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 599
Score = 26.6 bits (56), Expect = 7.7
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 287 EPKHRLARHGLYEKKRPTRKQR-KERKNRMKKVRGTKKSK 403
E K R + E+K+ +K+R KE+K KK R ++ K
Sbjct: 39 EKKERRKKERKKERKKERKKERKKEKKKERKKERKEERKK 78
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,096,782
Number of Sequences: 59808
Number of extensions: 257896
Number of successful extensions: 974
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 727815563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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