Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10567X
         (405 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   3.2  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   3.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   5.6  
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    22   7.4  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           22   9.8  

>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = +2

Query: 257 YDTLDLAKKFEPKHRLAR-------HGLYEKKRPTRKQRKERKNRMKK 379
           Y TL+L K+F   H L R       H L   +R  +   + R+ ++KK
Sbjct: 229 YQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 276


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = +2

Query: 257 YDTLDLAKKFEPKHRLAR-------HGLYEKKRPTRKQRKERKNRMKK 379
           Y TL+L K+F   H L R       H L   +R  +   + R+ ++KK
Sbjct: 246 YQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 293


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +2

Query: 323 EKKRPTRKQRKERKNRMKKV 382
           +KK PT+KQ K+ + ++ K+
Sbjct: 402 QKKLPTKKQHKQLQAQLDKL 421


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 269 RVCRRQSESS*LATSEVCLETEYEH 195
           R C    ESS L +S  CL    EH
Sbjct: 243 RACEHVKESSNLFSSPQCLGYRNEH 267


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +1

Query: 199  SYSVSRQTSEVASQLDSLCLRHTRSG---QEVRA 291
            S SV RQ S   +  + +C++  +SG   QEV A
Sbjct: 1165 SCSVCRQISPTVNSTEPVCVKCRKSGNSHQEVPA 1198


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,512
Number of Sequences: 2352
Number of extensions: 8184
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)