Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10566
         (808 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   5.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   6.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 124 CIYYFCR 104
           CIYYFCR
Sbjct: 297 CIYYFCR 303


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 570 ILALVSLDAVFSLNLTTGNVPVWVFHSICALRQLLLH 460
           ILA V L  V+   +    +  +  H  C L  +LLH
Sbjct: 147 ILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVVLLH 183


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 570 ILALVSLDAVFSLNLTTGNVPVWVFHSICALRQLLLH 460
           ILA V L  V+   +    +  +  H  C L  +LLH
Sbjct: 147 ILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVVLLH 183


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 267 YIFQIYIATLLALIPIFNATNPTLSNFPLN 178
           Y+  +YI  +L  +     T+PT+  F L+
Sbjct: 45  YLTSLYIWFILTQMTFSGVTSPTIMKFVLS 74


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 267 YIFQIYIATLLALIPIFNATNPTLSNFPLN 178
           Y+  +YI  +L  +     T+PT+  F L+
Sbjct: 45  YLTSLYIWFILTQMTFSGVTSPTIMKFVLS 74


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 312 WMGSLEPNMTESFIMAAFNRLGQRPLAVKVMR 407
           W+ S +P    +F   + +   QRP A+  +R
Sbjct: 24  WLNSQQPRNVPNFAAPSTSTAVQRPQAILQVR 55


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +3

Query: 309  LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEP 428
            L + +L+     S ++ AFN++G  PL+  +      G P
Sbjct: 1061 LKISNLKTYTQYSVVVQAFNKVGAGPLSDDIKAYTAEGVP 1100


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = +1

Query: 697 FWLYKGYGFVRFGNEDEHVMHYCYEWLLWTRNKPLKI 807
           F +   YG     +E E +   C+ WL      P+ I
Sbjct: 296 FTILLAYGCAGATSEAEKIAKICFYWLNEIPTMPVSI 332


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,838
Number of Sequences: 336
Number of extensions: 4877
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)