Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10566
(808 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 44 1e-04
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 44 1e-04
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 43 3e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 40 0.002
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 37 0.015
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 37 0.015
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 37 0.015
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 36 0.045
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 36 0.045
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 36 0.045
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 35 0.079
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 35 0.079
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 34 0.14
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 33 0.18
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.18
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 33 0.18
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 33 0.32
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 32 0.56
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 31 0.73
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 31 0.73
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 31 0.73
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 31 0.97
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 31 0.97
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 30 1.7
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 30 2.2
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 30 2.2
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 30 2.2
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 30 2.2
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 30 2.2
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 30 2.2
Z81123-2|CAB03365.1| 734|Caenorhabditis elegans Hypothetical pr... 29 3.0
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 29 5.2
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 28 6.8
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 28 6.8
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/70 (35%), Positives = 34/70 (48%)
Frame = +3
Query: 300 QCQLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDA 479
Q LW+G + + TE + F G P VK + K E GY F+ F T +EA
Sbjct: 67 QRTLWIGDVPTDWTEETLSQVFTECGHAPYKVKRVYVK--DELKGYCFIEFITFDEARQT 124
Query: 480 MHKLNGKPIP 509
++ LNG IP
Sbjct: 125 LYDLNGNRIP 134
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +2
Query: 515 FPVVRFRLNTASRETRANMQHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILD 694
F +RF L A+ N EF++ V + D+ D LYR+F KY S + AK+
Sbjct: 136 FKDIRFNLCFANDSYNPNS----EFNLHVSSVPDDMADAELYRIF-DKYQSCRGAKMFRF 190
Query: 695 NSGYTK 712
G +K
Sbjct: 191 VDGSSK 196
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
L++G L P++ ES + F+ G L+++V R+ T GYA+V+FQ +A AM
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGP-VLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 489 LNGKPI---PAHFQWLDLD 536
+N + + P W D
Sbjct: 93 MNFEALHGKPMRIMWSQRD 111
Score = 34.7 bits (76), Expect = 0.079
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 420 GEPAGYAFVHFQTDEEAIDAMHKLNG 497
G GY FVHF+T+E A +A+ K+NG
Sbjct: 157 GFSKGYGFVHFETEEAAQNAIQKVNG 182
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
L++G L P++ ES + F+ G L+++V R+ T GYA+V+FQ +A AM
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGP-VLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 489 LNGKPI---PAHFQWLDLD 536
+N + + P W D
Sbjct: 93 MNFEALHGKPMRIMWSQRD 111
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
L++G L P++ ES + F+ G L+++V R+ T GYA+V+FQ +A AM
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGP-VLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 489 LNGKPI---PAHFQWLDLD 536
+N + + P W D
Sbjct: 93 MNFEALHGKPMRIMWSQRD 111
Score = 34.7 bits (76), Expect = 0.079
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 420 GEPAGYAFVHFQTDEEAIDAMHKLNG 497
G GY FVHF+T+E A +A+ K+NG
Sbjct: 157 GFSKGYGFVHFETEEAAQNAIQKVNG 182
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/66 (30%), Positives = 41/66 (62%)
Frame = +3
Query: 300 QCQLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDA 479
Q +++G++ +++E I + F++ G L++K++ ++ TG+P GY F+ F + A A
Sbjct: 17 QRSVFVGNISYDVSEDTIRSIFSKAGN-VLSIKMVHDRETGKPKGYGFIEFPDIQTAEVA 75
Query: 480 MHKLNG 497
+ LNG
Sbjct: 76 IRNLNG 81
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/78 (25%), Positives = 41/78 (52%)
Frame = +3
Query: 267 KSLMKSPKMAMQCQLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFV 446
K+ M + +++G+L+P + E + F+ G K+MR+ +G G+AF+
Sbjct: 88 KASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFI 147
Query: 447 HFQTDEEAIDAMHKLNGK 500
+F + E + A+ +NG+
Sbjct: 148 NFASFEASDTALEAMNGQ 165
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/78 (25%), Positives = 41/78 (52%)
Frame = +3
Query: 267 KSLMKSPKMAMQCQLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFV 446
K+ M + +++G+L+P + E + F+ G K+MR+ +G G+AF+
Sbjct: 98 KASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFI 157
Query: 447 HFQTDEEAIDAMHKLNGK 500
+F + E + A+ +NG+
Sbjct: 158 NFASFEASDTALEAMNGQ 175
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +3
Query: 324 LEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHKLNG 497
L MT+ + + F +G+ + K++R+K TG+ GY FV++ +E+A+ A+ NG
Sbjct: 49 LPQGMTQEEVRSLFTSIGEIE-SCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNG 105
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
L++ +L + ++ + F++ G + VK++R+ T + GYAFV EA +AM
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAI-VNVKILRD-LTQQCKGYAFVSMSNYTEAYNAMLS 433
Query: 489 LNG 497
LNG
Sbjct: 434 LNG 436
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
L++G L P+++E+ + F+ G L+++V R+ + GYA+V+FQ +A A+
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGP-VLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 489 LNGKPI---PAHFQWLDLD 536
+N + I P W D
Sbjct: 118 MNFEVIHGRPMRIMWSQRD 136
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 420 GEPAGYAFVHFQTDEEAIDAMHKLNG 497
G GY FVHF+T+ A A+ K+NG
Sbjct: 182 GNSKGYGFVHFETEHSAQTAIEKVNG 207
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 333 NMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHKLN 494
++ + + A F++ G+ AV VM + G+P G+ FV F + A A+ KLN
Sbjct: 248 HLDQEKLSAMFSKFGEITSAV-VMTDA-QGKPKGFGFVAFADQDAAGQAVEKLN 299
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
L++G L P+++E+ + F+ G L+++V R+ + GYA+V+FQ +A A+
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGP-VLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 489 LNGKPI---PAHFQWLDLD 536
+N + I P W D
Sbjct: 118 MNFEVIHGRPMRIMWSQRD 136
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 420 GEPAGYAFVHFQTDEEAIDAMHKLNG 497
G GY FVHF+T+ A A+ K+NG
Sbjct: 182 GNSKGYGFVHFETEHSAQTAIEKVNG 207
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 333 NMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHKLN 494
++ + + A F++ G+ AV VM + G+P G+ FV F + A A+ KLN
Sbjct: 248 HLDQEKLSAMFSKFGEITSAV-VMTDA-QGKPKGFGFVAFADQDAAGQAVEKLN 299
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +3
Query: 321 SLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHKLN 494
+L M E + F ++G R + + + R+K TG P G+AFV F++ ++A A+ +LN
Sbjct: 182 NLPQEMNEDELRDLFGKIG-RVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/76 (26%), Positives = 44/76 (57%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
+++G L ++E ++A F++ G+ + + ++R+K TG+ G+AF+ ++ I A+
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGE-VMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDN 98
Query: 489 LNGKPIPAHFQWLDLD 536
NG I H + + +D
Sbjct: 99 FNG--ISLHKRMIRVD 112
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 37.5 bits (83), Expect = 0.011
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +3
Query: 174 FGLVESL-KVLDLLR*KLESVLIKWQYIFEKYKSLMKSPKMAMQCQLWMGSLEPNMTESF 350
FG ES+ K L KL+ +I+ + K K K MA +++G+L +TE
Sbjct: 208 FGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKD--MA----IFVGNLPFEITEDA 261
Query: 351 IMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTD 461
++ F+ AV+++R+K TG+ G+AFV+F+ D
Sbjct: 262 LITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQD 298
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/64 (29%), Positives = 36/64 (56%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
+++G L +++ + + F + G+ A KV+R+ T + GY FV F + A +A+
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEA-KVIRDVQTQKSKGYGFVSFPNKQNAENAIAG 195
Query: 489 LNGK 500
+NGK
Sbjct: 196 MNGK 199
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
L++ +L+P +T+ F+ FN++G AV + F G YAFV F +A A+
Sbjct: 42 LFVANLDPAITDEFLATLFNQIG----AVMKAKIIFEGLNDPYAFVEFSDHNQATLALQS 97
Query: 489 LNGKPI 506
NG+ +
Sbjct: 98 HNGREL 103
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/71 (26%), Positives = 38/71 (53%)
Frame = +3
Query: 285 PKMAMQCQLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDE 464
P+ + +++G L + + + AF + G+ A K++R+ T + GY FV + E
Sbjct: 126 PETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEA-KIIRDNNTNKGKGYGFVSYPRRE 184
Query: 465 EAIDAMHKLNG 497
+A A+ ++NG
Sbjct: 185 DAERAIDEMNG 195
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
+++G++ N+ E I AF+R G + +R T + GYAFV F+T E A A+ +
Sbjct: 258 VYVGNIA-NLGEDEIRRAFDRFGP----INEVR---TFKIQGYAFVKFETKESAARAIVQ 309
Query: 489 LNGKPI 506
+N I
Sbjct: 310 MNNADI 315
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +3
Query: 306 QLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMH 485
+++ G L +++ + AF + A KV+R T + GY FV F+ E+ + AM
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKA-KVVRESRTNKSKGYGFVSFRDSEDYVRAMR 262
Query: 486 KLNGK 500
+++GK
Sbjct: 263 EMDGK 267
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 35.5 bits (78), Expect = 0.045
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 276 MKSPKMAMQCQLWMGSLEPNMTESFIMAAFNRLGQRPL-AVKVMRNKFTGEPAGYAFVHF 452
M S +++ ++++GS+ + E + AF+ G P+ ++ + + TG +AFV +
Sbjct: 93 MYSQALSIMSRIYVGSISFEIREDMLRRAFDPFG--PIKSINMSWDPATGHHKTFAFVEY 150
Query: 453 QTDEEAIDAMHKLNGK 500
+ E A+ A +NG+
Sbjct: 151 EVPEAALLAQESMNGQ 166
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 35.5 bits (78), Expect = 0.045
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 276 MKSPKMAMQCQLWMGSLEPNMTESFIMAAFNRLGQRPL-AVKVMRNKFTGEPAGYAFVHF 452
M S +++ ++++GS+ + E + AF+ G P+ ++ + + TG +AFV +
Sbjct: 93 MYSQALSIMSRIYVGSISFEIREDMLRRAFDPFG--PIKSINMSWDPATGHHKTFAFVEY 150
Query: 453 QTDEEAIDAMHKLNGK 500
+ E A+ A +NG+
Sbjct: 151 EVPEAALLAQESMNGQ 166
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 35.5 bits (78), Expect = 0.045
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 276 MKSPKMAMQCQLWMGSLEPNMTESFIMAAFNRLGQRPL-AVKVMRNKFTGEPAGYAFVHF 452
M S +++ ++++GS+ + E + AF+ G P+ ++ + + TG +AFV +
Sbjct: 93 MYSQALSIMSRIYVGSISFEIREDMLRRAFDPFG--PIKSINMSWDPATGHHKTFAFVEY 150
Query: 453 QTDEEAIDAMHKLNGK 500
+ E A+ A +NG+
Sbjct: 151 EVPEAALLAQESMNGQ 166
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 34.7 bits (76), Expect = 0.079
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
+++G+ TE + F+ +GQ V+++ ++ TG P G+AF+ F + A A+ +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQIN-NVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 489 LNG 497
+NG
Sbjct: 66 MNG 68
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 34.7 bits (76), Expect = 0.079
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 420 GEPAGYAFVHFQTDEEAIDAMHKLNG 497
G GY FVHF+T+E A +A+ K+NG
Sbjct: 94 GFSKGYGFVHFETEEAAQNAIQKVNG 119
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
+++G++ TE I F +G V+++ ++ TG P G+AFV F + A A+ +
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVN-NVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 489 LNG 497
LNG
Sbjct: 67 LNG 69
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
+++G L + + AF G A KV+R+ T + GY FV + EEA A+ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDA-KVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 82
Query: 489 LNGK 500
+NG+
Sbjct: 83 MNGQ 86
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 554 ETRANMQHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNS 700
+ ++ + R F V+VGDLS +VD+ L F + + AKVI D +
Sbjct: 11 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAF-QPFGDVSDAKVIRDTN 58
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
+++G L + + AF G A KV+R+ T + GY FV + EEA A+ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDA-KVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 92
Query: 489 LNGK 500
+NG+
Sbjct: 93 MNGQ 96
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 554 ETRANMQHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNS 700
+ ++ + R F V+VGDLS +VD+ L F + + AKVI D +
Sbjct: 21 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAF-QPFGDVSDAKVIRDTN 68
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
+++G L + + AF G A KV+R+ T + GY FV + EEA A+ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDA-KVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 195
Query: 489 LNGK 500
+NG+
Sbjct: 196 MNGQ 199
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 554 ETRANMQHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNS 700
+ ++ + R F V+VGDLS +VD+ L F + + AKVI D +
Sbjct: 124 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAF-QPFGDVSDAKVIRDTN 171
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
+++G L + + AF G A KV+R+ T + GY FV + EEA A+ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDA-KVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 163
Query: 489 LNGK 500
+NG+
Sbjct: 164 MNGQ 167
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 554 ETRANMQHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNS 700
+ ++ + R F V+VGDLS +VD+ L F + + AKVI D +
Sbjct: 92 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAF-QPFGDVSDAKVIRDTN 139
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 32.7 bits (71), Expect = 0.32
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 432 GYAFVHFQTDEEAIDAMHKLNGKPI 506
G+ FV FQ +A DA+H LNGK +
Sbjct: 36 GFGFVDFQDQRDADDAVHDLNGKEL 60
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +3
Query: 297 MQCQLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAID 476
M ++++G L ++E I F GQ + +++N G+ FV F +A D
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQ--IRDVLLKN-------GFGFVEFDDKRDAED 51
Query: 477 AMHKLNGKPI 506
A+H LNGK +
Sbjct: 52 AVHDLNGKEL 61
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +3
Query: 297 MQCQLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAID 476
M ++++G L ++E I F GQ + +++N G+ FV F +A D
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQ--IRDVLLKN-------GFGFVEFDDKRDAED 51
Query: 477 AMHKLNGKPI 506
A+H LNGK +
Sbjct: 52 AVHDLNGKEL 61
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +3
Query: 297 MQCQLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAID 476
M ++++G L ++E I F GQ + +++N G+ FV F +A D
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQ--IRDVLLKN-------GFGFVEFDDKRDAED 51
Query: 477 AMHKLNGKPI 506
A+H LNGK +
Sbjct: 52 AVHDLNGKEL 61
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 31.9 bits (69), Expect = 0.56
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
+++G+ TE + F++ G V+++ ++ TG P G+AFV F + A A+ +
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVS-NVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 489 LNG 497
NG
Sbjct: 65 FNG 67
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3
Query: 297 MQCQLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAID 476
M ++++G L + T + F+R G R V V R P G+AFV + +A D
Sbjct: 1 MDAKVYVGGLPSDATSQELEEIFDRFG-RIRKVWVARR-----PPGFAFVEYDDVRDAED 54
Query: 477 AMHKLNGKPI 506
A+ L+G I
Sbjct: 55 AVRALDGSRI 64
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3
Query: 297 MQCQLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAID 476
M ++++G L + T + F+R G R V V R P G+AFV + +A D
Sbjct: 1 MDAKVYVGGLPSDATSQELEEIFDRFG-RIRKVWVARR-----PPGFAFVEYDDVRDAED 54
Query: 477 AMHKLNGKPI 506
A+ L+G I
Sbjct: 55 AVRALDGSRI 64
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3
Query: 297 MQCQLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAID 476
M ++++G L + T + F+R G R V V R P G+AFV + +A D
Sbjct: 1 MDAKVYVGGLPSDATSQELEEIFDRFG-RIRKVWVARR-----PPGFAFVEYDDVRDAED 54
Query: 477 AMHKLNGKPI 506
A+ L+G I
Sbjct: 55 AVRALDGSRI 64
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 31.1 bits (67), Expect = 0.97
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 342 ESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHKLNG 497
E ++ F + G L ++V RN+ TG G+A+V F A A +NG
Sbjct: 45 EKELLGYFRQFGN-VLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMNG 95
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 31.1 bits (67), Expect = 0.97
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQ-----RPLAVKVMRNKFTGEPAGYAFVHFQTDEEAI 473
+++ + E++I F+ G R +K+ ++ TGEP G + F A
Sbjct: 203 VFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKGECMITFVDASAAQ 262
Query: 474 DAMHKLNGKPIP 509
A+ NG+P P
Sbjct: 263 QAITMYNGQPFP 274
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 426 PAGYAFVHFQTDEEAIDAMHKLNGKPI 506
P G+AFV F+ A DA+ LNGK I
Sbjct: 63 PPGFAFVTFKRTVHAFDAVKYLNGKKI 89
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEA 470
+++ +L + E I ++ G+ LA+ + + K +G G AFVHF T EA
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAI-ICKYKDSGHSKGTAFVHFSTPIEA 317
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/67 (23%), Positives = 35/67 (52%)
Frame = +3
Query: 306 QLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMH 485
++++G + ++ E ++ F + G + +++M + +G GYAFV + E+A A
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSG-KIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAK 259
Query: 486 KLNGKPI 506
+G I
Sbjct: 260 TYDGHEI 266
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 435 YAFVHFQTDEEAIDAMHKLNGKPI 506
YAF+HF ++ + AM + NGK +
Sbjct: 412 YAFIHFNERDDCLKAMEEWNGKEL 435
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 432 GYAFVHFQTDEEAIDAMHKLNGK 500
G+AFV F+ +A DA H L+GK
Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGK 58
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 432 GYAFVHFQTDEEAIDAMHKLNGK 500
G+AFV F+ +A DA H L+GK
Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGK 58
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 432 GYAFVHFQTDEEAIDAMHKLNGK 500
G+AFV F+ +A DA H L+GK
Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGK 58
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQ-RPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMH 485
L++G++ ++ E I F G+ + +K N A YAFV FQT ++AI A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT----DAAYAFVMFQTVDQAIQAKA 226
Query: 486 KLNGKPIPA 512
+ +PI A
Sbjct: 227 EEQDRPIRA 235
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQ-RPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMH 485
L++G++ ++ E I F G+ + +K N A YAFV FQT ++AI A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT----DAAYAFVMFQTVDQAIQAKA 226
Query: 486 KLNGKPIPA 512
+ +PI A
Sbjct: 227 EEQDRPIRA 235
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQ-RPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMH 485
L++G++ ++ E I F G+ + +K N A YAFV FQT ++AI A
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT----DAAYAFVMFQTVDQAIQAKA 203
Query: 486 KLNGKPIPA 512
+ +PI A
Sbjct: 204 EEQDRPIRA 212
>Z81123-2|CAB03365.1| 734|Caenorhabditis elegans Hypothetical
protein T14D7.2 protein.
Length = 734
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 5/28 (17%)
Frame = +1
Query: 700 WLYKGYGFVRFGNE-----DEHVMHYCY 768
W+YKGY + E EH MHYCY
Sbjct: 145 WVYKGYECLLSAGETVYSKSEHPMHYCY 172
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +3
Query: 309 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVHFQTDEEAIDAMHK 488
L++G + +ES + F G+ + M + G+P GYAF+ + E A K
Sbjct: 106 LFVGRINYETSESKLRREFEAYGK--IKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKK 163
Query: 489 LNG 497
+G
Sbjct: 164 ADG 166
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 306 QLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMR--NKFTGEPAGYAFVHFQTDEEAIDA 479
++++G + TE+ + F + AVK ++ G+ GY F+ F+T+++A +
Sbjct: 67 RIFVGGFPTSTTETELREHFEKF----FAVKDVKMVKSLDGQSKGYGFITFETEDQA-EE 121
Query: 480 MHKLNGKPIPAHFQWLDL 533
+ KL K + + L+L
Sbjct: 122 IRKLTPKQLEFRSRKLNL 139
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 306 QLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMR--NKFTGEPAGYAFVHFQTDEEAIDA 479
++++G + TE+ + F + AVK ++ G+ GY F+ F+T+++A +
Sbjct: 68 RIFVGGFPTSTTETELREHFEKF----FAVKDVKMVKSLDGQSKGYGFITFETEDQA-EE 122
Query: 480 MHKLNGKPIPAHFQWLDL 533
+ KL K + + L+L
Sbjct: 123 IRKLTPKQLEFRSRKLNL 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,447,592
Number of Sequences: 27780
Number of extensions: 427861
Number of successful extensions: 1164
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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