Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10562
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   4.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   4.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   4.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   5.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 522  HFLLRIISLAVFYLVICIRV 463
            HFLL+II     Y++I I++
Sbjct: 1426 HFLLQIIGGVTTYIIILIQL 1445


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = -2

Query: 589 CIYDFHCFFVNSXXXXXXXXXLSFLVANNFFSCFLF--SHLYTCSVFVCLC*YIHIYLLY 416
           CIY F+C F+           L  L   +FF  F+    HL  C  F+    + +++LL+
Sbjct: 145 CIYYFYCAFI-----IFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFI----FFNMHLLF 195


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 51  PDRGRQPPSSSATLRP 4
           P++G+QPP ++A   P
Sbjct: 214 PNQGQQPPGNTAAALP 229


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 483 NRKQLKKLFATRNDNKYIY 539
           N +Q+ K+F TR+D   +Y
Sbjct: 110 NFQQIDKIFKTRDDRVKVY 128


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 51  PDRGRQPPSSSATLRP 4
           P++G+QPP ++A   P
Sbjct: 216 PNQGQQPPGNTAAALP 231


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = -3

Query: 399 VYVCVRVFMFHVCAFH*VDGSYVCRV*SCQVVPLFADWTLDTESVVIRI 253
           VY  +   +F+VC F  +    + RV + + V  FA W L   ++++ I
Sbjct: 16  VYTAIHP-LFYVCTFFGLAPYSLVRVENGKKVFKFAWWPLTRNALLVLI 63


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = -3

Query: 399 VYVCVRVFMFHVCAFH*VDGSYVCRV*SCQVVPLFADWTLDTESVVIRI 253
           VY  +   +F+VC F  +    + RV + + V  FA W L   ++++ I
Sbjct: 16  VYTAIHP-LFYVCTFFGLAPYSLVRVENGKKVFKFAWWPLTRNALLVLI 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,938
Number of Sequences: 336
Number of extensions: 3790
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)