Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10562
(728 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT009760-1|AAP88762.1| 645|Homo sapiens zinc finger protein 64 ... 31 3.2
BC021087-1|AAH21087.1| 645|Homo sapiens zinc finger protein 64 ... 31 3.2
AL121771-5|CAI21789.1| 645|Homo sapiens zinc finger protein 64 ... 31 3.2
AL109984-6|CAB86405.2| 426|Homo sapiens zinc finger protein 64 ... 31 3.2
AL109984-2|CAI43095.1| 645|Homo sapiens zinc finger protein 64 ... 31 3.2
AK129846-1|BAC85241.1| 236|Homo sapiens protein ( Homo sapiens ... 31 3.2
AK022690-1|BAB14182.1| 426|Homo sapiens protein ( Homo sapiens ... 31 3.2
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 31 5.6
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 31 5.6
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 31 5.6
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 31 5.6
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 31 5.6
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 31 5.6
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 31 5.6
M34309-1|AAA35979.1| 1342|Homo sapiens protein ( Human epidermal... 30 7.4
M29366-1|AAA35790.1| 1342|Homo sapiens protein ( Human epidermal... 30 7.4
BT007226-1|AAP35890.1| 331|Homo sapiens v-erb-b2 erythroblastic... 30 7.4
BC082992-1|AAH82992.1| 1342|Homo sapiens v-erb-b2 erythroblastic... 30 7.4
BC002706-1|AAH02706.1| 331|Homo sapiens ERBB3 protein protein. 30 7.4
>BT009760-1|AAP88762.1| 645|Homo sapiens zinc finger protein 64
homolog (mouse) protein.
Length = 645
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 56 AKSQGRGPVSAHSVHEGVAFGHGRKLCTESVDRCSHCGGPHLRE 187
AK++ R P+ + EG + H K+ T+ RC CG +R+
Sbjct: 550 AKTENRAPLGKEGLREGSS-QHVAKIVTQRAFRCETCGASFVRD 592
>BC021087-1|AAH21087.1| 645|Homo sapiens zinc finger protein 64
homolog (mouse) protein.
Length = 645
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 56 AKSQGRGPVSAHSVHEGVAFGHGRKLCTESVDRCSHCGGPHLRE 187
AK++ R P+ + EG + H K+ T+ RC CG +R+
Sbjct: 550 AKTENRAPLGKEGLREGSS-QHVAKIVTQRAFRCETCGASFVRD 592
>AL121771-5|CAI21789.1| 645|Homo sapiens zinc finger protein 64
homolog (mouse) protein.
Length = 645
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 56 AKSQGRGPVSAHSVHEGVAFGHGRKLCTESVDRCSHCGGPHLRE 187
AK++ R P+ + EG + H K+ T+ RC CG +R+
Sbjct: 550 AKTENRAPLGKEGLREGSS-QHVAKIVTQRAFRCETCGASFVRD 592
>AL109984-6|CAB86405.2| 426|Homo sapiens zinc finger protein 64
homolog (mouse) protein.
Length = 426
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 56 AKSQGRGPVSAHSVHEGVAFGHGRKLCTESVDRCSHCGGPHLRE 187
AK++ R P+ + EG + H K+ T+ RC CG +R+
Sbjct: 331 AKTENRAPLGKEGLREGSS-QHVAKIVTQRAFRCETCGASFVRD 373
>AL109984-2|CAI43095.1| 645|Homo sapiens zinc finger protein 64
homolog (mouse) protein.
Length = 645
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 56 AKSQGRGPVSAHSVHEGVAFGHGRKLCTESVDRCSHCGGPHLRE 187
AK++ R P+ + EG + H K+ T+ RC CG +R+
Sbjct: 550 AKTENRAPLGKEGLREGSS-QHVAKIVTQRAFRCETCGASFVRD 592
>AK129846-1|BAC85241.1| 236|Homo sapiens protein ( Homo sapiens
cDNA FLJ26336 fis, clone HRT02842. ).
Length = 236
Score = 31.5 bits (68), Expect = 3.2
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 520 FLVANNFFSCFLFSHLYTCS-VFVCLC*YIHIYL 422
F + + S F +H+Y C +++C+ YIHIY+
Sbjct: 157 FTCTHVYISVFTCTHVYICVFIYICIHVYIHIYI 190
>AK022690-1|BAB14182.1| 426|Homo sapiens protein ( Homo sapiens
cDNA FLJ12628 fis, clone NT2RM4001823, weakly similar to
ZINC FINGER PROTEIN 43. ).
Length = 426
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 56 AKSQGRGPVSAHSVHEGVAFGHGRKLCTESVDRCSHCGGPHLRE 187
AK++ R P+ + EG + H K+ T+ RC CG +R+
Sbjct: 331 AKTENRAPLGKEGLREGSS-QHVAKIVTQRAFRCETCGASFVRD 373
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 30.7 bits (66), Expect = 5.6
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 116 GHGRKLCTESVDRCSHCG-GPHLREKCADYTAGIEPQCCNC 235
GH K C D C +CG G H+ + C + E C NC
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNC 101
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 30.7 bits (66), Expect = 5.6
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 116 GHGRKLCTESVDRCSHCG-GPHLREKCADYTAGIEPQCCNC 235
GH K C D C +CG G H+ + C + E C NC
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNC 101
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 30.7 bits (66), Expect = 5.6
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 116 GHGRKLCTESVDRCSHCG-GPHLREKCADYTAGIEPQCCNC 235
GH K C D C +CG G H+ + C + E C NC
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNC 101
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 30.7 bits (66), Expect = 5.6
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 116 GHGRKLCTESVDRCSHCG-GPHLREKCADYTAGIEPQCCNC 235
GH K C D C +CG G H+ + C + E C NC
Sbjct: 54 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNC 94
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 30.7 bits (66), Expect = 5.6
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 116 GHGRKLCTESVDRCSHCG-GPHLREKCADYTAGIEPQCCNC 235
GH K C D C +CG G H+ + C + E C NC
Sbjct: 54 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNC 94
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 30.7 bits (66), Expect = 5.6
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 116 GHGRKLCTESVDRCSHCG-GPHLREKCADYTAGIEPQCCNC 235
GH K C D C +CG G H+ + C + E C NC
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNC 101
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 30.7 bits (66), Expect = 5.6
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 116 GHGRKLCTESVDRCSHCG-GPHLREKCADYTAGIEPQCCNC 235
GH K C D C +CG G H+ + C + E C NC
Sbjct: 51 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNC 91
>M34309-1|AAA35979.1| 1342|Homo sapiens protein ( Human epidermal
growth factor receptor (HER3) mRNA, complete cds. ).
Length = 1342
Score = 30.3 bits (65), Expect = 7.4
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Frame = +2
Query: 59 KSQGRGPVSAHSVHEGVAFGHGRKLC-----TESVDRCS-HCGGPHLREKCADYTAG--I 214
K GR H V +G +G G + C T +C+ HC GP+ + C D AG
Sbjct: 177 KDNGRSCPPCHEVCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCS 236
Query: 215 EPQCCNC 235
PQ +C
Sbjct: 237 GPQDTDC 243
>M29366-1|AAA35790.1| 1342|Homo sapiens protein ( Human epidermal
growth factor receptor (ERBB3) mRNA, complete cds. ).
Length = 1342
Score = 30.3 bits (65), Expect = 7.4
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Frame = +2
Query: 59 KSQGRGPVSAHSVHEGVAFGHGRKLC-----TESVDRCS-HCGGPHLREKCADYTAG--I 214
K GR H V +G +G G + C T +C+ HC GP+ + C D AG
Sbjct: 177 KDNGRSCPPCHEVCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCS 236
Query: 215 EPQCCNC 235
PQ +C
Sbjct: 237 GPQDTDC 243
>BT007226-1|AAP35890.1| 331|Homo sapiens v-erb-b2 erythroblastic
leukemia viral oncogene homolog 3 (avian) protein.
Length = 331
Score = 30.3 bits (65), Expect = 7.4
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Frame = +2
Query: 59 KSQGRGPVSAHSVHEGVAFGHGRKLC-----TESVDRCS-HCGGPHLREKCADYTAG--I 214
K GR H V +G +G G + C T +C+ HC GP+ + C D AG
Sbjct: 177 KDNGRSCPPCHEVCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCS 236
Query: 215 EPQCCNC 235
PQ +C
Sbjct: 237 GPQDTDC 243
>BC082992-1|AAH82992.1| 1342|Homo sapiens v-erb-b2 erythroblastic
leukemia viral oncogene homolog 3 (avian) protein.
Length = 1342
Score = 30.3 bits (65), Expect = 7.4
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Frame = +2
Query: 59 KSQGRGPVSAHSVHEGVAFGHGRKLC-----TESVDRCS-HCGGPHLREKCADYTAG--I 214
K GR H V +G +G G + C T +C+ HC GP+ + C D AG
Sbjct: 177 KDNGRSCPPCHEVCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCS 236
Query: 215 EPQCCNC 235
PQ +C
Sbjct: 237 GPQDTDC 243
>BC002706-1|AAH02706.1| 331|Homo sapiens ERBB3 protein protein.
Length = 331
Score = 30.3 bits (65), Expect = 7.4
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Frame = +2
Query: 59 KSQGRGPVSAHSVHEGVAFGHGRKLC-----TESVDRCS-HCGGPHLREKCADYTAG--I 214
K GR H V +G +G G + C T +C+ HC GP+ + C D AG
Sbjct: 177 KDNGRSCPPCHEVCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCS 236
Query: 215 EPQCCNC 235
PQ +C
Sbjct: 237 GPQDTDC 243
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,980,347
Number of Sequences: 237096
Number of extensions: 2210229
Number of successful extensions: 5098
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5097
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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