Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10562
(728 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 33 0.40
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 33 0.40
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 33 0.40
U26549-1|AAA67954.1| 296|Drosophila melanogaster zinc finger pr... 30 3.7
BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p pro... 29 4.9
AY122109-1|AAM52621.1| 868|Drosophila melanogaster GH12365p pro... 29 4.9
AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-P... 29 4.9
AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-P... 29 4.9
BT024221-1|ABC86283.1| 1241|Drosophila melanogaster RE04053p pro... 29 6.5
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 29 6.5
AE014298-1113|AAF46314.1| 1241|Drosophila melanogaster CG2253-PA... 29 6.5
X51968-1|CAA36226.1| 471|Drosophila melanogaster protein ( Dros... 29 8.6
BT029412-1|ABK57069.1| 320|Drosophila melanogaster IP02511p pro... 29 8.6
BT025009-1|ABE01239.1| 296|Drosophila melanogaster IP02509p pro... 29 8.6
AE014135-102|AAF59331.1| 131|Drosophila melanogaster CG11260-PA... 29 8.6
AE014134-157|AAF51453.1| 296|Drosophila melanogaster CG3642-PA ... 29 8.6
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 33.1 bits (72), Expect = 0.40
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 113 FGHGRKLCTESVDRCSHCGG-PHLREKCADYTAGIEPQCCNC 235
FGH + C E +RC C G H+ + C T P C C
Sbjct: 63 FGHFARACPEEAERCYRCNGIGHISKDC---TQADNPTCYRC 101
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 53 PAKSQGRGPVSAHSVHEGVAFGHGRKLCTESVDRCSHCG-GPHLREKC 193
P RGP + S ++ GH K C E+ C CG HLR +C
Sbjct: 112 PEAVNERGPTNV-SCYKCNRTGHISKNCPETSKTCYGCGKSGHLRREC 158
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 33.1 bits (72), Expect = 0.40
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 113 FGHGRKLCTESVDRCSHCGG-PHLREKCADYTAGIEPQCCNC 235
FGH + C E +RC C G H+ + C T P C C
Sbjct: 63 FGHFARACPEEAERCYRCNGIGHISKDC---TQADNPTCYRC 101
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 53 PAKSQGRGPVSAHSVHEGVAFGHGRKLCTESVDRCSHCG-GPHLREKC 193
P RGP + S ++ GH K C E+ C CG HLR +C
Sbjct: 112 PEAVNERGPTNV-SCYKCNRTGHISKNCPETSKTCYGCGKSGHLRREC 158
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 33.1 bits (72), Expect = 0.40
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 113 FGHGRKLCTESVDRCSHCGG-PHLREKCADYTAGIEPQCCNC 235
FGH + C E +RC C G H+ + C T P C C
Sbjct: 63 FGHFARACPEEAERCYRCNGIGHISKDC---TQADNPTCYRC 101
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 53 PAKSQGRGPVSAHSVHEGVAFGHGRKLCTESVDRCSHCG-GPHLREKC 193
P RGP + S ++ GH K C E+ C CG HLR +C
Sbjct: 112 PEAVNERGPTNV-SCYKCNRTGHISKNCPETSKTCYGCGKSGHLRREC 158
>U26549-1|AAA67954.1| 296|Drosophila melanogaster zinc finger
protein protein.
Length = 296
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 161 HCGGPHLREK-CADYTAGIEPQCCNCLH 241
HC HLR C DY AG P+ +C H
Sbjct: 139 HCRHQHLRRVLCMDYLAGFCPEAPSCKH 166
>BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p protein.
Length = 1240
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 299 FLRIGHSTLKAL*SVSATWSVDNCS-TE-VRFPRYNRRISRVGVGLHSDCTCPHSRCIIC 126
F+ IG + L + W++ TE +R Y RR++ + +G+ CP CI+C
Sbjct: 1151 FILIGDQRRECL--SNGLWNIPEYGYTECLREVYYTRRVAFIAIGIIFLVICPLMLCIVC 1208
Query: 125 G 123
G
Sbjct: 1209 G 1209
>AY122109-1|AAM52621.1| 868|Drosophila melanogaster GH12365p
protein.
Length = 868
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 299 FLRIGHSTLKAL*SVSATWSVDNCS-TE-VRFPRYNRRISRVGVGLHSDCTCPHSRCIIC 126
F+ IG + L + W++ TE +R Y RR++ + +G+ CP CI+C
Sbjct: 588 FILIGDQRRECL--SNGLWNIPEYGYTECLREVYYTRRVAFIAIGIIFLVICPLMLCIVC 645
Query: 125 G 123
G
Sbjct: 646 G 646
>AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-PB,
isoform B protein.
Length = 1431
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 299 FLRIGHSTLKAL*SVSATWSVDNCS-TE-VRFPRYNRRISRVGVGLHSDCTCPHSRCIIC 126
F+ IG + L + W++ TE +R Y RR++ + +G+ CP CI+C
Sbjct: 1151 FILIGDQRRECL--SNGLWNIPEYGYTECLREVYYTRRVAFIAIGIIFLVICPLMLCIVC 1208
Query: 125 G 123
G
Sbjct: 1209 G 1209
>AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-PA,
isoform A protein.
Length = 1431
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 299 FLRIGHSTLKAL*SVSATWSVDNCS-TE-VRFPRYNRRISRVGVGLHSDCTCPHSRCIIC 126
F+ IG + L + W++ TE +R Y RR++ + +G+ CP CI+C
Sbjct: 1151 FILIGDQRRECL--SNGLWNIPEYGYTECLREVYYTRRVAFIAIGIIFLVICPLMLCIVC 1208
Query: 125 G 123
G
Sbjct: 1209 G 1209
>BT024221-1|ABC86283.1| 1241|Drosophila melanogaster RE04053p
protein.
Length = 1241
Score = 29.1 bits (62), Expect = 6.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 53 PAKSQGRGPVSAHSVHEGVAFGHGRKLCTESVDRC 157
P +S R P+ ++HE + + +LC ++VDRC
Sbjct: 700 PPESSKREPMVRPAMHEYIRYLIFEELCKQNVDRC 734
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 29.1 bits (62), Expect = 6.5
Identities = 17/59 (28%), Positives = 22/59 (37%)
Frame = +2
Query: 59 KSQGRGPVSAHSVHEGVAFGHGRKLCTESVDRCSHCGGPHLREKCADYTAGIEPQCCNC 235
K++ R PV + F H + C + RC C G HL C C NC
Sbjct: 647 KNRTREPVQCYRCQ---GFRHAKNSCMKP-PRCMKCAGDHL-SSCCTKPRSTPATCVNC 700
>AE014298-1113|AAF46314.1| 1241|Drosophila melanogaster CG2253-PA
protein.
Length = 1241
Score = 29.1 bits (62), Expect = 6.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 53 PAKSQGRGPVSAHSVHEGVAFGHGRKLCTESVDRC 157
P +S R P+ ++HE + + +LC ++VDRC
Sbjct: 700 PPESSKREPMVRPAMHEYIRYLIFEELCKQNVDRC 734
>X51968-1|CAA36226.1| 471|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 471
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/58 (29%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = +2
Query: 71 RGPVSAHSVHEGVAFGHGRKLCTESVDRCSHCGGP-HLREKCADYTAGIEPQCCNCLH 241
R V ++ H V F H C + C CG H KC + C NC H
Sbjct: 391 RSQVRTYACHRCVGFDHKVSECRQKESVCRQCGQQGHTAAKCQN-----PVDCRNCRH 443
>BT029412-1|ABK57069.1| 320|Drosophila melanogaster IP02511p
protein.
Length = 320
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 161 HCGGPHLREK-CADYTAGIEPQCCNCLH 241
HC HLR C DY AG P+ +C H
Sbjct: 163 HCRHQHLRRVLCMDYLAGFCPEGPSCKH 190
>BT025009-1|ABE01239.1| 296|Drosophila melanogaster IP02509p
protein.
Length = 296
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 161 HCGGPHLREK-CADYTAGIEPQCCNCLH 241
HC HLR C DY AG P+ +C H
Sbjct: 139 HCRHQHLRRVLCMDYLAGFCPEGPSCKH 166
>AE014135-102|AAF59331.1| 131|Drosophila melanogaster CG11260-PA
protein.
Length = 131
Score = 28.7 bits (61), Expect = 8.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 408 IKVYNKYIWIYQHRQTNTEHVYK*LNRKQL 497
+ ++KY+W Y R T E V + R+ L
Sbjct: 20 VDAFSKYVWFYPTRSTGVEEVLNCIERQAL 49
>AE014134-157|AAF51453.1| 296|Drosophila melanogaster CG3642-PA
protein.
Length = 296
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 161 HCGGPHLREK-CADYTAGIEPQCCNCLH 241
HC HLR C DY AG P+ +C H
Sbjct: 139 HCRHQHLRRVLCMDYLAGFCPEGPSCKH 166
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,891,694
Number of Sequences: 53049
Number of extensions: 684216
Number of successful extensions: 1746
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1746
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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