Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10562
         (728 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   6.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   9.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   9.0  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 71  RGPVSAHSVHEGVAFGHGRKLCTESVDRCSHCG 169
           RG +  HS   G  FG    L ++ + R  +CG
Sbjct: 657 RGSIIDHSYGGGFGFGSAVLLISDRLSRDLYCG 689


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 71  RGPVSAHSVHEGVAFGHGRKLCTESVDRCSHCG 169
           RG +  HS   G  FG    L ++ + R  +CG
Sbjct: 695 RGSIIDHSYGGGFGFGSAVLLISDRLSRDLYCG 727


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -3

Query: 519 FLLRIISLAVFYLVICIRVQ 460
           FL+ ++ +AV Y+ I +R+Q
Sbjct: 214 FLIPMVFIAVLYIRIGLRIQ 233


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 501 KLFATRNDNKYIY*SIYILLTKKQW 575
           KLF T  D KY+Y  +   L  + W
Sbjct: 430 KLFKTFKDRKYLYMLMEACLGGELW 454


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 533 YILEYIYTIDKETMEIIDTLSQN 601
           Y L+Y YTI KE    +  L +N
Sbjct: 370 YFLDYNYTIPKEKHVEVARLIRN 392


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 533 YILEYIYTIDKETMEIIDTLSQN 601
           Y L+Y YTI KE    +  L +N
Sbjct: 370 YFLDYNYTIPKEKHVEVARLIRN 392


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,329
Number of Sequences: 438
Number of extensions: 4442
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)