Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10559X
         (359 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    27   9.5  
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro...    27   9.5  
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    27   9.5  

>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 258  RGTLQKTDDSCVNFVEGTGGYVFSSTTFXK 347
            R  LQ  +D  ++FV   GG+VF++  F K
Sbjct: 3262 RTKLQFDNDMGIDFVLNNGGWVFATQNFEK 3291


>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p protein.
          Length = 1074

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 258  RGTLQKTDDSCVNFVEGTGGYVFSSTTFXK 347
            R  LQ  +D  ++FV   GG+VF++  F K
Sbjct: 985  RTKLQFDNDMGIDFVLNNGGWVFATQNFEK 1014


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 258  RGTLQKTDDSCVNFVEGTGGYVFSSTTFXK 347
            R  LQ  +D  ++FV   GG+VF++  F K
Sbjct: 3262 RTKLQFDNDMGIDFVLNNGGWVFATQNFEK 3291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,795,976
Number of Sequences: 53049
Number of extensions: 261779
Number of successful extensions: 659
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 901135692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)