Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10559X
         (359 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical pr...    28   2.3  
Z75714-4|CAB00062.1|  360|Caenorhabditis elegans Hypothetical pr...    27   3.0  
Z93388-5|CAB60295.1|  387|Caenorhabditis elegans Hypothetical pr...    27   5.2  
Z93388-4|CAB07662.1|  456|Caenorhabditis elegans Hypothetical pr...    27   5.2  
Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr...    26   6.9  
U97009-3|AAC69031.1|  619|Caenorhabditis elegans Hypothetical pr...    26   9.1  
AF039710-2|AAB96690.1|  419|Caenorhabditis elegans Hypothetical ...    26   9.1  

>Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical
           protein F01G10.5 protein.
          Length = 824

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 94  YDVIFKNMAVTTSLITATLDLKIGGGKNLNQVVGF 198
           Y+V+++ + V  SL+  TLD K+    NL ++  F
Sbjct: 61  YEVLYRKIRVGNSLLADTLDPKMAAEGNLFEICKF 95


>Z75714-4|CAB00062.1|  360|Caenorhabditis elegans Hypothetical
           protein ZC434.8 protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 97  DVIFKNMAVTTSLITATLDLKIGGGKNLNQVVG 195
           DV+ KN +  T L    LD+   GG+NL+  VG
Sbjct: 35  DVVAKNKSKKTRLGATLLDVIQSGGENLDSGVG 67


>Z93388-5|CAB60295.1|  387|Caenorhabditis elegans Hypothetical
           protein T10C6.6b protein.
          Length = 387

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 74  SSRKHRPIHGSPIAKTKCLIAPGL 3
           SS  H   HG PI+  K ++ PG+
Sbjct: 152 SSEPHHNFHGEPISLFKAVLLPGV 175


>Z93388-4|CAB07662.1|  456|Caenorhabditis elegans Hypothetical
           protein T10C6.6a protein.
          Length = 456

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 74  SSRKHRPIHGSPIAKTKCLIAPGL 3
           SS  H   HG PI+  K ++ PG+
Sbjct: 221 SSEPHHNFHGEPISLFKAVLLPGV 244


>Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical protein
            C49C3.4 protein.
          Length = 1566

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 17   SNTWSSLLVNRVSDDASCSTQSSQPF 94
            SN WS + V    DDA+C+ Q +  F
Sbjct: 1541 SNAWSDVCVCNEIDDATCARQFTSIF 1566


>U97009-3|AAC69031.1|  619|Caenorhabditis elegans Hypothetical
           protein T19H12.6 protein.
          Length = 619

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -1

Query: 161 ILRSSVAVISDVVTAMFLKITS*MADSIASSRK 63
           +LRSS+ +IS +   MF+K +    + +A + K
Sbjct: 475 VLRSSMGLISKIADPMFVKSSKKYTEELAKTSK 507


>AF039710-2|AAB96690.1|  419|Caenorhabditis elegans Hypothetical
           protein C46E10.5 protein.
          Length = 419

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 102 DLQEHGGYDIADHGHTRPQDWRW 170
           +L  +GG  I++ G TRPQ  +W
Sbjct: 382 ELAIYGGGKISEEGLTRPQPCKW 404


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,531,550
Number of Sequences: 27780
Number of extensions: 132034
Number of successful extensions: 381
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)