Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10558
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   1.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.1  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   8.1  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/53 (20%), Positives = 25/53 (47%)
 Frame = +3

Query: 36  QSLADPVNYENLFPEYNESLELEYFQREFGYEQSTAMEAVEPNSKITNTERDI 194
           + L + +     F ++NE+++  YF +      S A  +   N K+ +  R++
Sbjct: 246 ERLCNKLKRATRFNDFNEAIKEAYFPKLDSLVSSRAWPSRVANQKLRDLNREV 298


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 327 NRNVKFQSTSWRR*NGNSVKSNSKTTSITMTSRT*K 434
           N N    +  WR+ N N  ++N+ + +   TSR  K
Sbjct: 378 NNNGNNSNNHWRKNNPNDNRNNTSSRAQGETSRNSK 413


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +2

Query: 215  ETTRAPQHTAATQYNQIQDSEGDSREDATNGNTTSESQQKRKIS 346
            E  R   HT+     + +D + D R   +NG    E + K  +S
Sbjct: 872  EEERLENHTSVKIKREAEDRDEDERSFHSNG-AKEEDEDKPSVS 914


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 369 NGNSVKSNSKTTSITMTS 422
           NGNS  S S  TSI +++
Sbjct: 17  NGNSGDSTSSATSIDLST 34


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 369 NGNSVKSNSKTTSITMTS 422
           NGNS  S S  TSI +++
Sbjct: 17  NGNSGDSTSSATSIDLST 34


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 36  QSLADPVNYENLFPEYNESLELEYFQR 116
           Q + D +      P YN+  EL+Y +R
Sbjct: 24  QEMKDVLGDTKKKPVYNDLQELKYMER 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,635
Number of Sequences: 336
Number of extensions: 1894
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)