Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10558
         (610 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X70476-1|CAA49900.1|  906|Homo sapiens subunit of coatomer compl...    41   0.003
BC000326-1|AAH00326.1|  906|Homo sapiens coatomer protein comple...    41   0.003
X99717-1|CAA68053.1|  754|Homo sapiens SRcyp protein protein.          31   2.4  
U40763-1|AAB40347.1|  754|Homo sapiens CARS-Cyp protein.               31   2.4  
BC111693-1|AAI11694.1|  739|Homo sapiens PPIG protein protein.         31   2.4  
AC016772-2|AAY24233.1|  571|Homo sapiens unknown protein.              31   2.4  

>X70476-1|CAA49900.1|  906|Homo sapiens subunit of coatomer complex
           protein.
          Length = 906

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 17/39 (43%), Positives = 26/39 (66%)
 Frame = +3

Query: 3   ESVGATNKKSGQSLADPVNYENLFPEYNESLELEYFQRE 119
           E++   N+K+ +SLADP  YENLFP   E+  +E + +E
Sbjct: 775 ENLSKVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKE 813


>BC000326-1|AAH00326.1|  906|Homo sapiens coatomer protein complex,
           subunit beta 2 (beta prime) protein.
          Length = 906

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 17/39 (43%), Positives = 26/39 (66%)
 Frame = +3

Query: 3   ESVGATNKKSGQSLADPVNYENLFPEYNESLELEYFQRE 119
           E++   N+K+ +SLADP  YENLFP   E+  +E + +E
Sbjct: 775 ENLSKVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKE 813


>X99717-1|CAA68053.1|  754|Homo sapiens SRcyp protein protein.
          Length = 754

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
 Frame = +2

Query: 95  RARILPTRIRLRTEHRHGGRRAEFKDHEYGTRHRRGIR*SETTRAP--QHTAATQYNQIQ 268
           R+R    R+R RT  R   R  E+  +      RRG   S   R P  +  +  +  + +
Sbjct: 567 RSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRRRRR 626

Query: 269 DSEGDSREDATNGNTTSESQQKRKIS 346
           DS    RE++ + N      Q+ K S
Sbjct: 627 DSRSSEREESQSRNKDKYRNQESKSS 652


>U40763-1|AAB40347.1|  754|Homo sapiens CARS-Cyp protein.
          Length = 754

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
 Frame = +2

Query: 95  RARILPTRIRLRTEHRHGGRRAEFKDHEYGTRHRRGIR*SETTRAP--QHTAATQYNQIQ 268
           R+R    R+R RT  R   R  E+  +      RRG   S   R P  +  +  +  + +
Sbjct: 567 RSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRRRRR 626

Query: 269 DSEGDSREDATNGNTTSESQQKRKIS 346
           DS    RE++ + N      Q+ K S
Sbjct: 627 DSRSSEREESQSRNKDKYRNQESKSS 652


>BC111693-1|AAI11694.1|  739|Homo sapiens PPIG protein protein.
          Length = 739

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
 Frame = +2

Query: 95  RARILPTRIRLRTEHRHGGRRAEFKDHEYGTRHRRGIR*SETTRAP--QHTAATQYNQIQ 268
           R+R    R+R RT  R   R  E+  +      RRG   S   R P  +  +  +  + +
Sbjct: 552 RSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRRRRR 611

Query: 269 DSEGDSREDATNGNTTSESQQKRKIS 346
           DS    RE++ + N      Q+ K S
Sbjct: 612 DSRSSEREESQSRNKDKYRNQESKSS 637


>AC016772-2|AAY24233.1|  571|Homo sapiens unknown protein.
          Length = 571

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
 Frame = +2

Query: 95  RARILPTRIRLRTEHRHGGRRAEFKDHEYGTRHRRGIR*SETTRAP--QHTAATQYNQIQ 268
           R+R    R+R RT  R   R  E+  +      RRG   S   R P  +  +  +  + +
Sbjct: 384 RSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRRRRR 443

Query: 269 DSEGDSREDATNGNTTSESQQKRKIS 346
           DS    RE++ + N      Q+ K S
Sbjct: 444 DSRSSEREESQSRNKDKYRNQESKSS 469


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,350,430
Number of Sequences: 237096
Number of extensions: 1030082
Number of successful extensions: 2172
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2172
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)