Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10558
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023906-1|ABA81840.1|  914|Drosophila melanogaster GH18655p pro...    46   4e-05
AY119527-1|AAM50181.1|  230|Drosophila melanogaster GH16479p pro...    46   4e-05
AJ006524-1|CAA07085.1|  914|Drosophila melanogaster coatomer, be...    46   4e-05
AJ006523-1|CAA07084.1|  914|Drosophila melanogaster coatomer, be...    46   4e-05
AE014134-2340|AAF53294.2|  914|Drosophila melanogaster CG6699-PA...    46   4e-05
BT024232-1|ABC86294.1| 1047|Drosophila melanogaster LD16032p pro...    31   1.6  
AE014296-2892|AAF49353.2| 1324|Drosophila melanogaster CG7692-PA...    31   1.6  

>BT023906-1|ABA81840.1|  914|Drosophila melanogaster GH18655p
           protein.
          Length = 914

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +3

Query: 3   ESVGATNKKSGQSLADPVNYENLFPEYNESLELE-YFQREFGYEQSTAMEAVEP-NSKIT 176
           E +G  N+K+GQSLADP  Y NLFP   ++L +E + Q E   +    + A  P NS+  
Sbjct: 777 EKLGKVNEKAGQSLADPAQYTNLFPGLGDALRVEQHLQEERARKAPARLAANLPLNSERH 836

Query: 177 NTERDIAAEYAEA 215
             +   AAE   A
Sbjct: 837 PLQELFAAEQGAA 849


>AY119527-1|AAM50181.1|  230|Drosophila melanogaster GH16479p
           protein.
          Length = 230

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +3

Query: 3   ESVGATNKKSGQSLADPVNYENLFPEYNESLELE-YFQREFGYEQSTAMEAVEP-NSKIT 176
           E +G  N+K+GQSLADP  Y NLFP   ++L +E + Q E   +    + A  P NS+  
Sbjct: 93  EKLGKVNEKAGQSLADPAQYTNLFPGLGDALRVEQHLQEERARKAPARLAANLPLNSERH 152

Query: 177 NTERDIAAEYAEA 215
             +   AAE   A
Sbjct: 153 PLQELFAAEQGAA 165


>AJ006524-1|CAA07085.1|  914|Drosophila melanogaster coatomer,
           beta-prime subunit protein.
          Length = 914

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +3

Query: 3   ESVGATNKKSGQSLADPVNYENLFPEYNESLELE-YFQREFGYEQSTAMEAVEP-NSKIT 176
           E +G  N+K+GQSLADP  Y NLFP   ++L +E + Q E   +    + A  P NS+  
Sbjct: 777 EKLGKVNEKAGQSLADPAQYTNLFPGLGDALRVEQHLQEERARKAPARLAANLPLNSERH 836

Query: 177 NTERDIAAEYAEA 215
             +   AAE   A
Sbjct: 837 PLQELFAAEQGAA 849


>AJ006523-1|CAA07084.1|  914|Drosophila melanogaster coatomer,
           beta-prime subunit protein.
          Length = 914

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +3

Query: 3   ESVGATNKKSGQSLADPVNYENLFPEYNESLELE-YFQREFGYEQSTAMEAVEP-NSKIT 176
           E +G  N+K+GQSLADP  Y NLFP   ++L +E + Q E   +    + A  P NS+  
Sbjct: 777 EKLGKVNEKAGQSLADPAQYTNLFPGLGDALRVEQHLQEERARKAPARLAANLPLNSERH 836

Query: 177 NTERDIAAEYAEA 215
             +   AAE   A
Sbjct: 837 PLQELFAAEQGAA 849


>AE014134-2340|AAF53294.2|  914|Drosophila melanogaster CG6699-PA
           protein.
          Length = 914

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +3

Query: 3   ESVGATNKKSGQSLADPVNYENLFPEYNESLELE-YFQREFGYEQSTAMEAVEP-NSKIT 176
           E +G  N+K+GQSLADP  Y NLFP   ++L +E + Q E   +    + A  P NS+  
Sbjct: 777 EKLGKVNEKAGQSLADPAQYTNLFPGLGDALRVEQHLQEERARKAPARLAANLPLNSERH 836

Query: 177 NTERDIAAEYAEA 215
             +   AAE   A
Sbjct: 837 PLQELFAAEQGAA 849


>BT024232-1|ABC86294.1| 1047|Drosophila melanogaster LD16032p
           protein.
          Length = 1047

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 48  DPVNYENL-FPEYNESLELEYFQREFGYEQSTAMEAVEPNSKITNTERDIAAEYAEAKRR 224
           D + Y  + + +Y +  +L+Y   E GYE +  +   E  ++ T+   D A +  E K+R
Sbjct: 655 DDLKYLQIDYAKYRDRPQLDYGTIEEGYENAVNLPEAEEEAEQTSAVDDEAEKAKEQKKR 714

Query: 225 GP 230
            P
Sbjct: 715 RP 716


>AE014296-2892|AAF49353.2| 1324|Drosophila melanogaster CG7692-PA
           protein.
          Length = 1324

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 48  DPVNYENL-FPEYNESLELEYFQREFGYEQSTAMEAVEPNSKITNTERDIAAEYAEAKRR 224
           D + Y  + + +Y +  +L+Y   E GYE +  +   E  ++ T+   D A +  E K+R
Sbjct: 655 DDLKYLQIDYAKYRDRPQLDYGTIEEGYENAVNLPEAEEEAEQTSAVDDEAEKAKEQKKR 714

Query: 225 GP 230
            P
Sbjct: 715 RP 716


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,699,207
Number of Sequences: 53049
Number of extensions: 360787
Number of successful extensions: 1397
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)