Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10557
(710 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 142 3e-34
01_06_0662 + 30987187-30987277,30987825-30990214 103 1e-22
04_01_0103 + 1082077-1082167,1083037-1085477 100 1e-21
02_04_0017 + 18937774-18937864,18938505-18940945 100 1e-21
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 83 2e-16
02_04_0148 - 20198407-20201424 50 2e-06
03_05_0511 + 25056018-25059107 47 1e-05
01_01_1141 + 9052511-9052573,9052626-9052928 33 0.17
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 33 0.30
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 31 0.90
03_06_0614 - 35099225-35099461,35099545-35099694,35099919-351000... 29 2.8
11_01_0089 + 670597-672210 29 3.6
01_06_0832 + 32291454-32291537,32291584-32291661,32292081-322928... 29 3.6
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 29 4.8
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78... 28 6.4
06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-72... 28 6.4
12_02_0410 + 18701258-18701327,18701398-18701630,18701782-187026... 28 8.4
09_04_0165 + 15274448-15277336 28 8.4
01_06_1790 - 39888313-39888350,39888437-39888530,39888612-398888... 28 8.4
01_06_0261 + 27978341-27978391,27978539-27978683,27978794-279788... 28 8.4
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 142 bits (343), Expect = 3e-34
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +2
Query: 254 EFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVY 433
+FKIL+A IA EPLHRGGGQIIPTARRV YSAFLMA PRLMEP ++E+Q P DCVSA+Y
Sbjct: 812 KFKILNANIAPEPLHRGGGQIIPTARRVVYSAFLMANPRLMEPVYYIEIQTPIDCVSAIY 871
Query: 434 TVLAKRRGHVTQDAPVPGSPLYTIK 508
TVL++RRGHVT D P PG+P+Y +K
Sbjct: 872 TVLSRRRGHVTADVPKPGTPIYVVK 896
Score = 131 bits (316), Expect = 6e-31
Identities = 56/77 (72%), Positives = 67/77 (87%)
Frame = +3
Query: 24 RKRLGEFFQTKYDWDLLAARSIWAFGPDTMGPNILVDDTLPSEVDKHLLASVKDSIVQGF 203
+K + +FF+ +Y WD+LAARSIWAFGP+ GPNIL+DDTL EVDK+LL +VKDSIVQGF
Sbjct: 735 QKEITDFFRQRYQWDVLAARSIWAFGPEKQGPNILLDDTLSVEVDKNLLNAVKDSIVQGF 794
Query: 204 QWGTREGPLCEEPIRNV 254
QWG REGPLC+EPIRNV
Sbjct: 795 QWGAREGPLCDEPIRNV 811
Score = 100 bits (239), Expect = 1e-21
Identities = 42/54 (77%), Positives = 47/54 (87%)
Frame = +1
Query: 505 QTFVPAIDSFGFETDLRTHTQGQAFCLQVFHHWQIVPGDPLDKSIVIRPLEPQP 666
+ F+P I+SFGFETDLR HTQGQAFCL VF HW IVPGDPLDK+IV+RPLEP P
Sbjct: 896 KAFLPVIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKNIVLRPLEPAP 949
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 103 bits (247), Expect = 1e-22
Identities = 44/84 (52%), Positives = 62/84 (73%)
Frame = +2
Query: 257 FKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYT 436
F++ D ++ + +HRGGGQIIPTARRV Y+A L A PRL+EP VE+QAP + + +Y+
Sbjct: 685 FEVCDVILHSDAIHRGGGQIIPTARRVIYAAQLTAKPRLLEPVYLVEIQAPENALGGIYS 744
Query: 437 VLAKRRGHVTQDAPVPGSPLYTIK 508
VL ++RGHV ++ PG+PLY IK
Sbjct: 745 VLNQKRGHVFEEMQRPGTPLYNIK 768
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/76 (43%), Positives = 45/76 (59%)
Frame = +3
Query: 21 DRKRLGEFFQTKYDWDLLAARSIWAFGPDTMGPNILVDDTLPSEVDKHLLASVKDSIVQG 200
D K + ++ WD A+ IW FGP+T GPNI+VD + V L +KDS+V G
Sbjct: 608 DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNIVVD--MCKGV--QYLNEIKDSVVAG 663
Query: 201 FQWGTREGPLCEEPIR 248
FQW ++EG L EE +R
Sbjct: 664 FQWASKEGALAEENMR 679
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +1
Query: 505 QTFVPAIDSFGFETDLRTHTQGQAFCLQVFHHWQIVPGDPLD 630
+ ++P I+SFGF + LR T GQAF L VF HW+++ DPL+
Sbjct: 768 KAYLPVIESFGFTSTLRAATSGQAFPLFVFDHWEMLSVDPLE 809
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 100 bits (240), Expect = 1e-21
Identities = 43/84 (51%), Positives = 61/84 (72%)
Frame = +2
Query: 257 FKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYT 436
F++ D V+ + +HRGGGQ+IPTARRV Y++ L A PRL+EP VE+QAP + + +Y
Sbjct: 687 FEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYG 746
Query: 437 VLAKRRGHVTQDAPVPGSPLYTIK 508
VL ++RGHV ++ PG+PLY IK
Sbjct: 747 VLNQKRGHVFEEMQRPGTPLYNIK 770
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/78 (41%), Positives = 46/78 (58%)
Frame = +3
Query: 21 DRKRLGEFFQTKYDWDLLAARSIWAFGPDTMGPNILVDDTLPSEVDKHLLASVKDSIVQG 200
D K + ++ WD A+ IW FGP+T GPN++VD + V L +KDS+V G
Sbjct: 612 DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVD--MCKGV--QYLNEIKDSVVAG 667
Query: 201 FQWGTREGPLCEEPIRNV 254
FQW ++EG L EE +R +
Sbjct: 668 FQWASKEGALAEENMRGI 685
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +1
Query: 505 QTFVPAIDSFGFETDLRTHTQGQAFCLQVFHHWQIVPGDPLDKS 636
+ ++P I+SFGF + LR T GQAF VF HW ++ DPL+ S
Sbjct: 770 KAYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMTSDPLEVS 813
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 100 bits (240), Expect = 1e-21
Identities = 43/84 (51%), Positives = 61/84 (72%)
Frame = +2
Query: 257 FKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYT 436
F++ D V+ + +HRGGGQ+IPTARRV Y++ L A PRL+EP VE+QAP + + +Y
Sbjct: 687 FEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYG 746
Query: 437 VLAKRRGHVTQDAPVPGSPLYTIK 508
VL ++RGHV ++ PG+PLY IK
Sbjct: 747 VLNQKRGHVFEEMQRPGTPLYNIK 770
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/78 (41%), Positives = 46/78 (58%)
Frame = +3
Query: 21 DRKRLGEFFQTKYDWDLLAARSIWAFGPDTMGPNILVDDTLPSEVDKHLLASVKDSIVQG 200
D K + ++ WD A+ IW FGP+T GPN++VD + V L +KDS+V G
Sbjct: 612 DPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVD--MCKGV--QYLNEIKDSVVAG 667
Query: 201 FQWGTREGPLCEEPIRNV 254
FQW ++EG L EE +R +
Sbjct: 668 FQWASKEGALAEENMRGI 685
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 505 QTFVPAIDSFGFETDLRTHTQGQAFCLQVFHHWQIVPGDPLD 630
+ ++P I+SFGF + LR T GQAF VF HW ++ DPL+
Sbjct: 770 KAYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMTSDPLE 811
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 83.4 bits (197), Expect = 2e-16
Identities = 37/84 (44%), Positives = 54/84 (64%)
Frame = +2
Query: 257 FKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYT 436
F++ D + + +HRGGGQ+IPTARR Y+A L A+PRLMEP V++Q P V VY
Sbjct: 697 FELCDVTLHSDSIHRGGGQLIPTARRAMYAAQLTASPRLMEPMYQVDIQVPKTAVGNVYG 756
Query: 437 VLAKRRGHVTQDAPVPGSPLYTIK 508
VL R G + +++ G+PL ++
Sbjct: 757 VLNSRNGELVEESERTGTPLSNLR 780
Score = 74.9 bits (176), Expect = 6e-14
Identities = 36/78 (46%), Positives = 49/78 (62%)
Frame = +3
Query: 21 DRKRLGEFFQTKYDWDLLAARSIWAFGPDTMGPNILVDDTLPSEVDKHLLASVKDSIVQG 200
D K G+ ++ WD A+ IWAFGP+T GPN+LVD + V L+ +KDS+V G
Sbjct: 622 DIKERGKILSEEFGWDKDLAKKIWAFGPETKGPNLLVD--MCKGV--QYLSEIKDSVVAG 677
Query: 201 FQWGTREGPLCEEPIRNV 254
FQW ++EG L EE +R V
Sbjct: 678 FQWASKEGALAEENMRGV 695
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 511 FVPAIDSFGFETDLRTHTQGQAFCLQVFHHWQIVPGDPLDK 633
++P SF F LR T GQAF +FHHWQ + DP +
Sbjct: 782 YLPVAKSFDFTEKLRAETSGQAFPQCIFHHWQTMRSDPFQE 822
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +2
Query: 308 GQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPG 487
GQII R +A L + PRL+EP F E+ P + + ++Y VL R V ++ G
Sbjct: 843 GQIITAVREACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKEEMQEG 902
Query: 488 SPLYTI 505
+ L+T+
Sbjct: 903 TSLFTV 908
Score = 34.3 bits (75), Expect = 0.097
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 511 FVPAIDSFGFETDLRTHTQGQAFCLQVFHHWQIVPGDP 624
++ +S F LR T G A L F HW+ VP DP
Sbjct: 911 YLSVAESSEFSKKLRNATAGAASALLAFSHWETVPQDP 948
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +3
Query: 135 DTLPSEVDKHLLASVKDSIVQGFQWGTREGPLCEEP 242
D S VD +VK+SI GFQ T GPLC EP
Sbjct: 776 DGSQSAVDGLDPETVKNSIATGFQLATNAGPLCGEP 811
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +2
Query: 269 DAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYTVLAK 448
DA E + GQ+I + A + PRL+E F E+ P + + A Y VL++
Sbjct: 854 DAANHSEQYNIFSGQVITAVKEACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSR 913
Query: 449 RRGHVTQDAPVPGSPLYTI 505
+R V ++ G+ L+T+
Sbjct: 914 KRARVLKEEMQEGTSLFTV 932
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 511 FVPAIDSFGFETDLRTHTQGQAFCLQVFHHWQIVPGDP 624
++P +S GF +LR+ T G A L V HW+ +P DP
Sbjct: 935 YLPVAESVGFSNELRSVTAGAASALLVLSHWEAIPEDP 972
Score = 34.3 bits (75), Expect = 0.097
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 99 GPDTMGPNILVDDTLPSEVDKHL-LASV--KDSIVQGFQWGTREGPLCEEPI 245
G D N L D ++ + L L SV ++ IV GFQ T GPLC+EP+
Sbjct: 786 GSDAEANNDLDDSEPSADTPESLHLESVALRNCIVSGFQLATNAGPLCDEPM 837
>01_01_1141 + 9052511-9052573,9052626-9052928
Length = 121
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -1
Query: 587 CRQKAWPCVCVRRSVSKPNESMAGTNV*WCRAATRGPERPGSRDLSS*PAPCRR 426
CR+ AW C R +V+ P +AG+ R P P SR L + AP R+
Sbjct: 3 CRRPAWHCSAARAAVALPPLPLAGSP--QPHGTKRRPVEPASRRLPAAAAPARQ 54
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +2
Query: 359 ATPRLMEPYLFVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPG 487
A PRL+EP + VEV P + + V L RRG V PG
Sbjct: 647 AGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQVNSFGDKPG 689
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 368 RLMEPYLFVEVQAPADCVSAVYTVLAKRRGHVTQDAP 478
+L EPY V+ P + + +V +L KRRG + P
Sbjct: 501 KLQEPYEIAAVEVPEEYMGSVVELLGKRRGQMVDMQP 537
>03_06_0614 -
35099225-35099461,35099545-35099694,35099919-35100066,
35100152-35100231,35100428-35100594,35100692-35100940,
35101025-35102310,35102423-35102544,35102946-35103272
Length = 921
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 278 IAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYTVLA 445
+A + GGG+ R + A R + + F+ V AP D + AV+ VLA
Sbjct: 26 VADVAVGGGGGEGEREGRTLVVGVRADAASRTLLTWTFINVAAPGDRIVAVHVVLA 81
>11_01_0089 + 670597-672210
Length = 537
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 381 RICL-LRCKRRPTAYPPSTRCWLRGEVT*PRTLRSPGRRSTPSNVRPGHRL 530
R CL LR + +++PP+T W RG P T P RR+ P RL
Sbjct: 31 RRCLCLRLQATVSSFPPATIRWPRGLFLSPLTKPRPTRRAHQCVPHPRPRL 81
>01_06_0832 +
32291454-32291537,32291584-32291661,32292081-32292804,
32294259-32294446,32294623-32294682,32295516-32295959
Length = 525
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 145 PPKWTSISWLRSRIALFKASSGVRGKGRSVRSPSGT*IQD--PGCCHRAGAAAPGRRTDH 318
PP+ ++SWL IA +SS G ++ + SG +D P G G ++
Sbjct: 103 PPELAAMSWLARSIAATLSSSHSDEDGDNLEASSGDDHRDEQPDTPSGGGGGVKGDLSEL 162
Query: 319 PHGATRGVFSISN 357
TRG++ +++
Sbjct: 163 TDSLTRGLWGVAS 175
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 473 RPGSRDLSS*PAPCRRRIRSRPALAPQQTDTAPSDEGSPL--EMLNTPR 333
RPGS P+P RR+RS L+P++ +P SPL L PR
Sbjct: 307 RPGSPIRRRSPSPPPRRLRSPRHLSPRRDRGSPIRRRSPLPRRRLTPPR 355
>12_01_0101 -
779047-779298,779459-779711,779857-780005,780033-780281,
780377-780571,780681-780788,780935-781156,781669-781986,
781988-782615,783059-783135,783161-783267,783491-783619,
783763-783820,783902-783984,784458-784539,784617-784693,
784827-784910,784999-785068,785146-785234,785319-786008,
786485-786797
Length = 1410
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 154 WTSISWLRSRIALFKASSGVRGKGRSVRSP-SGT*IQDPGCCHRAGAAAPGRRTDHPHGA 330
+TSI+WLR R LF + +R + R +P + T I P C A+ GR T G
Sbjct: 643 FTSINWLRDR--LF---TSIRRRRRRALAPLAPTAIAMPSCFTLDSASDDGRSTAQGQGW 697
Query: 331 TRGV 342
GV
Sbjct: 698 CAGV 701
>06_01_0090 -
724296-724532,724756-724938,725038-725088,725520-725639,
725738-725840,726106-726264,726728-726846,726891-727004,
727119-727277,727404-727451,728464-728640,729064-729116,
729549-729661,729793-729873,729966-730081,730786-730905,
732321-732429,732593-732770,732852-732920,733102-733233,
733657-733766,733843-734003,734081-734171,734258-734355,
734499-734619,734732-734892,734985-735090,735142-735236,
735828-735852,736008-736084,736196-736282,736372-736421,
736558-736639,736735-736795,737064-737116,737206-737395,
737472-737595,737860-737962,738064-738156,740344-740422,
740508-740584,740915-741043,742614-742731,742816-742913,
743457-743546,744998-745123,745238-745351,745488-745611,
745865-746019,746104-746201,746357-746600
Length = 1926
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 263 ILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAV 430
+L+ +I Q P R G QI+ RR+ S + LM PY V + AP+ + +
Sbjct: 187 VLEILIGQSPSDRLGRQILDEIRRIKRSDAAL-RGELM-PYNIVPLDAPSSVANTI 240
>12_02_0410 +
18701258-18701327,18701398-18701630,18701782-18702639,
18703006-18703865,18704285-18704395,18704486-18704567,
18704643-18704735,18704795-18704989
Length = 833
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -1
Query: 485 RGPERPGSRDLSS*PAPCRRRIRSRPALAPQQTDTAPSDEGSPLEMLNTPRVAP 324
RGP P + + P P R+ P+LAPQ P DE P +T + P
Sbjct: 471 RGPSPPPQQAAPNSPTPLPRQ----PSLAPQSYLAPPLDERVPPPQPDTSKEQP 520
>09_04_0165 + 15274448-15277336
Length = 962
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 274 CHRAGAAAPGRRTDHPHGA-TRGVFSISNGDPSSDGAVSVC 393
CH A GRR +HP + GV +S+ + SS G ++C
Sbjct: 63 CHGLSCADSGRRKNHPRASLVNGV--VSSLEDSSGGEPALC 101
>01_06_1790 -
39888313-39888350,39888437-39888530,39888612-39888836,
39888944-39889018,39889144-39889212,39889319-39889384,
39889492-39889713,39889794-39890681,39890973-39891053,
39892546-39892598,39893010-39893088,39893218-39893319
Length = 663
Score = 27.9 bits (59), Expect = 8.4
Identities = 29/89 (32%), Positives = 39/89 (43%)
Frame = +1
Query: 178 SRIALFKASSGVRGKGRSVRSPSGT*IQDPGCCHRAGAAAPGRRTDHPHGATRGVFSISN 357
+R++ F A G G G P+ + D AGAA + + G TR S+S
Sbjct: 310 ARLSGFDARGGGGGGGYGGAGPAQFGLPD------AGAAGASKEMEL--GNTRDESSVS- 360
Query: 358 GDPSSDGAVSVC*GASAGRLRIRRLHGAG 444
DP+ GA GAS G R R+ G G
Sbjct: 361 -DPAPGGAEIPPKGASDGNARKRKASGKG 388
>01_06_0261 +
27978341-27978391,27978539-27978683,27978794-27978861,
27979630-27980073,27980163-27980681,27981002-27981214,
27981650-27981805,27982753-27982941
Length = 594
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +1
Query: 55 NTIGIFWLPVRFGPS-VPT-RWDPTF 126
+T GIF PV +GP VP WDP+F
Sbjct: 141 STPGIFAQPVAYGPELVPAYTWDPSF 166
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,679,255
Number of Sequences: 37544
Number of extensions: 596679
Number of successful extensions: 1930
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1926
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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