Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10555X
(479 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7A5D Cluster: PREDICTED: similar to beta-1,4-m... 83 3e-15
UniRef50_UPI00015B60A6 Cluster: PREDICTED: similar to beta1,4 ma... 79 7e-14
UniRef50_Q4SN39 Cluster: Chromosome 6 SCAF14544, whole genome sh... 69 5e-11
UniRef50_P90522 Cluster: Mannosyltransferase; n=2; Dictyostelium... 68 1e-10
UniRef50_A1DPC9 Cluster: Beta-1,4-mannosyltransferase (Alg1), pu... 67 2e-10
UniRef50_Q1E3I7 Cluster: Putative uncharacterized protein; n=2; ... 67 2e-10
UniRef50_Q9VEE9 Cluster: CG18012-PA; n=3; Diptera|Rep: CG18012-P... 65 7e-10
UniRef50_A7SH20 Cluster: Predicted protein; n=1; Nematostella ve... 65 9e-10
UniRef50_Q9BT22 Cluster: Chitobiosyldiphosphodolichol beta-manno... 65 9e-10
UniRef50_Q22797 Cluster: Putative uncharacterized protein; n=2; ... 64 2e-09
UniRef50_A4QXH2 Cluster: Beta-1,4-mannosyltransferase, putative;... 64 2e-09
UniRef50_Q10QW6 Cluster: Glycosyl transferase, group 1 family pr... 62 6e-09
UniRef50_Q6C3K2 Cluster: Chitobiosyldiphosphodolichol beta-manno... 62 8e-09
UniRef50_Q0DBH3 Cluster: Os06g0564800 protein; n=2; Oryza sativa... 58 8e-08
UniRef50_A7ECF7 Cluster: Putative uncharacterized protein; n=1; ... 58 8e-08
UniRef50_Q5KNF4 Cluster: Beta-1,4-mannosyltransferase, putative;... 57 2e-07
UniRef50_O13933 Cluster: Chitobiosyldiphosphodolichol beta-manno... 55 7e-07
UniRef50_A4S8H0 Cluster: Predicted protein; n=1; Ostreococcus lu... 55 1e-06
UniRef50_Q4P5G4 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_UPI0000498D6B Cluster: chitobiosyldiphosphodolichol bet... 54 2e-06
UniRef50_A5B604 Cluster: Putative uncharacterized protein; n=2; ... 53 3e-06
UniRef50_P16661 Cluster: Chitobiosyldiphosphodolichol beta-manno... 53 4e-06
UniRef50_Q5BLW4 Cluster: Beta-1,4-mannosyltransferase; n=5; Aspe... 52 5e-06
UniRef50_Q23MP4 Cluster: Similar to chitobiosyldiphosphodolichol... 52 7e-06
UniRef50_A0BGC6 Cluster: Chromosome undetermined scaffold_106, w... 52 7e-06
UniRef50_A2G6B1 Cluster: Glycosyl transferase, group 1 family pr... 49 5e-05
UniRef50_Q6BS98 Cluster: Chitobiosyldiphosphodolichol beta-manno... 49 5e-05
UniRef50_Q5C3W1 Cluster: SJCHGC03360 protein; n=1; Schistosoma j... 47 2e-04
UniRef50_Q00U34 Cluster: Beta-1,4-mannosyltransferase; n=1; Ostr... 44 0.002
UniRef50_Q388S6 Cluster: Glycosyltransferase, putative; n=3; Try... 42 0.007
UniRef50_Q5CYM2 Cluster: ALG1 like beta-1,4 mannosyltransferase ... 42 0.009
UniRef50_Q4QDV2 Cluster: Glycosyltransferase, putative; n=3; Lei... 38 0.088
UniRef50_UPI0000E48881 Cluster: PREDICTED: hypothetical protein;... 34 1.9
UniRef50_Q9VBC7 Cluster: CG6438-PA; n=44; Coelomata|Rep: CG6438-... 33 4.4
UniRef50_A7SL37 Cluster: Predicted protein; n=1; Nematostella ve... 32 7.7
>UniRef50_UPI0000DB7A5D Cluster: PREDICTED: similar to
beta-1,4-mannosyltransferase; n=2; Endopterygota|Rep:
PREDICTED: similar to beta-1,4-mannosyltransferase -
Apis mellifera
Length = 444
Score = 83.0 bits (196), Expect = 3e-15
Identities = 34/69 (49%), Positives = 51/69 (73%)
Frame = +1
Query: 271 LMYTLFLTGRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHM 450
L + LF +Y+L QNPP+IP++P+ Y ++ +QF+IDWHNYAY++MA+ L+ DH+
Sbjct: 94 LSWFLFTKKLSNYILVQNPPSIPTIPICWFYSIIVGSQFIIDWHNYAYTLMALNLKDDHL 153
Query: 451 LVRMARSTE 477
LVR AR+ E
Sbjct: 154 LVRFARAIE 162
Score = 69.7 bits (163), Expect = 3e-11
Identities = 32/61 (52%), Positives = 40/61 (65%)
Frame = +3
Query: 6 VRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHP 185
V K ++VLGD+GRSPRMQYHALS A G + II Y + PL E+ NP I + L+P
Sbjct: 10 VHKNVCIIVLGDLGRSPRMQYHALSFAKEGFTIDIIGYPGSIPLREIRENPFIHIYYLYP 69
Query: 186 F 188
F
Sbjct: 70 F 70
>UniRef50_UPI00015B60A6 Cluster: PREDICTED: similar to beta1,4
mannosyltransferase; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to beta1,4 mannosyltransferase -
Nasonia vitripennis
Length = 405
Score = 78.6 bits (185), Expect = 7e-14
Identities = 34/69 (49%), Positives = 46/69 (66%)
Frame = +1
Query: 271 LMYTLFLTGRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHM 450
L Y LF +LL QNPPAIP++PV YC + +F IDWHNYA++IMA++L +H
Sbjct: 122 LSYVLFFKCNSSFLLIQNPPAIPTIPVCWFYCYARRVEFAIDWHNYAHTIMALSLGQNHR 181
Query: 451 LVRMARSTE 477
LV++A E
Sbjct: 182 LVKLATFIE 190
Score = 56.0 bits (129), Expect = 4e-07
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +3
Query: 24 VVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITV 170
+VVLGDIGRSPRMQYHA S G V+I+ Y + PL E+ ++ ++ +
Sbjct: 44 IVVLGDIGRSPRMQYHATSFTREGYAVEIVGYPGSPPLQELQDHANVKI 92
>UniRef50_Q4SN39 Cluster: Chromosome 6 SCAF14544, whole genome
shotgun sequence; n=2; Deuterostomia|Rep: Chromosome 6
SCAF14544, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 437
Score = 68.9 bits (161), Expect = 5e-11
Identities = 30/79 (37%), Positives = 51/79 (64%)
Frame = +3
Query: 24 VVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHPFELKWG 203
V+VLGDIGRSPRM+YH+LSL+ +G +V + +VET P ++L I ++ + + G
Sbjct: 43 VLVLGDIGRSPRMRYHSLSLSKHGFNVTFVGFVETKPPEDLLKEDKIKIVPIREMKGVKG 102
Query: 204 PVVLKYISPFQFERMKFMT 260
P +L Y + F+ ++ ++
Sbjct: 103 PKILTYATKVVFQCLQLLS 121
Score = 56.4 bits (130), Expect = 3e-07
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +1
Query: 307 YLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMARSTE 477
++L QNPP +PS+ V ++ ++ +IDWHNY YSIMA++ H +VR+A E
Sbjct: 131 HILMQNPPGLPSISVAWFVSILRGSRLIIDWHNYGYSIMALSHGQGHPVVRLAERYE 187
>UniRef50_P90522 Cluster: Mannosyltransferase; n=2; Dictyostelium
discoideum|Rep: Mannosyltransferase - Dictyostelium
discoideum (Slime mold)
Length = 493
Score = 67.7 bits (158), Expect = 1e-10
Identities = 43/108 (39%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +3
Query: 24 VVVLGDIGRSPRMQYHALSLAN-NGLDVKIISYVETDPLPEVLNNPHITVIKLHPFELKW 200
VVVLGDIGRSPRMQYH++SL+ V +I Y E++P P+++NN IT+ L PF +
Sbjct: 6 VVVLGDIGRSPRMQYHSMSLSKLENTKVTLIGYRESEPHPQIVNNDSITIEPLKPFPISM 65
Query: 201 GPVVLKYISPFQFERMKFMTECKLNVYPIPYWKVRLFVGPEPTRHTIL 344
K I + CK+ I V L P P +TIL
Sbjct: 66 SN-SFKKIPLISIFMWPLLAICKVLFQIIQLMYVLLVKVPSPL-NTIL 111
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Frame = +1
Query: 271 LMYTLFLT--GRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTL--E 438
LMY L + + +L Q+PPAIP++ V ++ C + VIDWHN Y+++ ++L
Sbjct: 95 LMYVLLVKVPSPLNTILVQSPPAIPTIFVMQIVCWIRGVHLVIDWHNLGYTLLKLSLSKS 154
Query: 439 PDHMLVRMARSTE 477
+H ++R+A+ E
Sbjct: 155 DNHPIIRLAKFIE 167
>UniRef50_A1DPC9 Cluster: Beta-1,4-mannosyltransferase (Alg1),
putative; n=6; Pezizomycotina|Rep:
Beta-1,4-mannosyltransferase (Alg1), putative -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 461
Score = 67.3 bits (157), Expect = 2e-10
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +3
Query: 9 RKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHP 185
+ +++VLGDIGRSPRMQYHALS+A G V +I Y E++ P++ +NP I++ L P
Sbjct: 44 KTTTQILVLGDIGRSPRMQYHALSIARGGGQVDLIGYNESEVHPDISSNPRISITALAP 102
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +1
Query: 286 FLTGRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMA 465
+ T +LL QNPP+IP+L + + + + +IDWHN+ Y+I+A+ L H LVR +
Sbjct: 136 YRTEPAQWLLVQNPPSIPTLAIASMASFLRHTKLIIDWHNFGYTILALKLGDRHPLVRFS 195
Query: 466 R 468
+
Sbjct: 196 K 196
>UniRef50_Q1E3I7 Cluster: Putative uncharacterized protein; n=2;
Eurotiomycetidae|Rep: Putative uncharacterized protein -
Coccidioides immitis
Length = 462
Score = 66.9 bits (156), Expect = 2e-10
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = +3
Query: 21 KVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHP 185
++VVLGDIG SPRMQYHA S+A +G V II Y + P PE+L+NP ++++ L P
Sbjct: 46 QIVVLGDIGHSPRMQYHAESVAKHGGRVTIIGYQTSPPKPELLSNPLVSIVALPP 100
Score = 61.3 bits (142), Expect = 1e-08
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = +1
Query: 307 YLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMARSTE 477
++L QNPP +P+L + ++ C + + +IDWHN+ YSI+AM L P H +V+ R E
Sbjct: 141 WMLIQNPPTVPTLVMAQLACWLRNTRLIIDWHNFGYSILAMKLGPRHPMVKFLRFHE 197
>UniRef50_Q9VEE9 Cluster: CG18012-PA; n=3; Diptera|Rep: CG18012-PA -
Drosophila melanogaster (Fruit fly)
Length = 446
Score = 65.3 bits (152), Expect = 7e-10
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +1
Query: 271 LMYTLFLTGRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHM 450
L+ L GR +LL QNPP IP+L V +YC V++ + IDWHNY Y+++A+ +
Sbjct: 89 LLMALISIGRPSFLLVQNPPGIPTLIVCYLYCAVTRTKLAIDWHNYTYTVLALGMSKGEQ 148
Query: 451 --LVRMARSTE 477
L+R+ R E
Sbjct: 149 SPLIRLVRRLE 159
Score = 61.3 bits (142), Expect = 1e-08
Identities = 29/57 (50%), Positives = 38/57 (66%)
Frame = +3
Query: 9 RKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKL 179
++ A V+VLGDIGRSPRMQYHA SL V +I Y+ET PL E+ +P + +L
Sbjct: 8 KRNACVIVLGDIGRSPRMQYHAQSLLEENYHVDMIGYLETRPLEELTQHPRCRIHEL 64
>UniRef50_A7SH20 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 333
Score = 64.9 bits (151), Expect = 9e-10
Identities = 27/57 (47%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Frame = +1
Query: 301 CDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTL-EPDHMLVRMAR 468
C ++L QNPPAIPSL V + ++ + +IDWHN+ Y+I+A+ + PDH+LVR+A+
Sbjct: 69 CSHILVQNPPAIPSLAVAWLVSLLCNCKLLIDWHNFGYTILALGVGTPDHLLVRIAK 125
>UniRef50_Q9BT22 Cluster: Chitobiosyldiphosphodolichol
beta-mannosyltransferase; n=39; Eumetazoa|Rep:
Chitobiosyldiphosphodolichol beta-mannosyltransferase -
Homo sapiens (Human)
Length = 464
Score = 64.9 bits (151), Expect = 9e-10
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +3
Query: 27 VVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHPFE-LKWG 203
VVLGD+GRSPRMQYHALSLA +G V ++ + + P E+L N I ++ L + L G
Sbjct: 38 VVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGLTELQSLAVG 97
Query: 204 PVVLKY 221
P V +Y
Sbjct: 98 PRVFQY 103
Score = 55.6 bits (128), Expect = 5e-07
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +1
Query: 307 YLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMAR 468
Y+ QNPP +PS+ V + ++ VIDWHNY YSIM + P+H LV +A+
Sbjct: 126 YIFLQNPPGLPSIAVCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAK 179
>UniRef50_Q22797 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 487
Score = 63.7 bits (148), Expect = 2e-09
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +3
Query: 9 RKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHP 185
R A VVVLGD+GRSPRM HA LA+ G DVK+I + ++ P +++N+P I ++ + P
Sbjct: 12 RSEAAVVVLGDVGRSPRMCNHAKMLADEGFDVKLIGFFDSIPGEQIMNHPRIKIVGIPP 70
Score = 47.2 bits (107), Expect = 2e-04
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +1
Query: 310 LLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIM 423
+L QNPPA+P++ V ++ + A+F IDWHNY YSI+
Sbjct: 111 ILMQNPPALPTMIVCFMFSIFKFAKFSIDWHNYMYSIL 148
>UniRef50_A4QXH2 Cluster: Beta-1,4-mannosyltransferase, putative;
n=4; Sordariomycetes|Rep: Beta-1,4-mannosyltransferase,
putative - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 486
Score = 63.7 bits (148), Expect = 2e-09
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = +3
Query: 21 KVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHP 185
+V+VLGDIGRSPR+QYHA+S+A +G V +I Y ET PE+L P ++V L P
Sbjct: 40 QVLVLGDIGRSPRVQYHAMSIAKHGGRVDLIGYQETPLHPELLKYPKVSVRSLDP 94
Score = 50.4 bits (115), Expect = 2e-05
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 292 TGRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMARS 471
T +LL QNPP+IP++ V V + +IDWHNY ++I++ T H VR+++
Sbjct: 129 TPPAQWLLIQNPPSIPTMAVATVISRCRNTRLLIDWHNYGWTILSGTRGARHPFVRISKL 188
Query: 472 TE 477
E
Sbjct: 189 YE 190
>UniRef50_Q10QW6 Cluster: Glycosyl transferase, group 1 family
protein, expressed; n=6; Magnoliophyta|Rep: Glycosyl
transferase, group 1 family protein, expressed - Oryza
sativa subsp. japonica (Rice)
Length = 473
Score = 62.1 bits (144), Expect = 6e-09
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = +3
Query: 9 RKVAKVVVLGDIGRSPRMQYHALSLANN-GLDVKIISYVETDPLPEVLNNPHITVIKLHP 185
RK A VVVLGDIGRSPRMQYH+LSLAN G++V I++ +DP + NP I + ++
Sbjct: 10 RKRAAVVVLGDIGRSPRMQYHSLSLANQAGMEVDIVANGGSDPHLLLRENPSIHIHEMKS 69
Query: 186 FEL 194
+L
Sbjct: 70 VQL 72
Score = 54.8 bits (126), Expect = 1e-06
Identities = 19/64 (29%), Positives = 40/64 (62%)
Frame = +1
Query: 271 LMYTLFLTGRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHM 450
+ Y F R D + QNPP++P+L ++ + A+F++DWHN+ Y+++ ++ H+
Sbjct: 96 IWYLCFKIPRPDVFIVQNPPSVPTLAAVKLASWLRGAKFIVDWHNFGYTLLGLSHGRSHI 155
Query: 451 LVRM 462
+V++
Sbjct: 156 IVKI 159
>UniRef50_Q6C3K2 Cluster: Chitobiosyldiphosphodolichol
beta-mannosyltransferase; n=1; Yarrowia lipolytica|Rep:
Chitobiosyldiphosphodolichol beta-mannosyltransferase -
Yarrowia lipolytica (Candida lipolytica)
Length = 463
Score = 61.7 bits (143), Expect = 8e-09
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Frame = +1
Query: 271 LMYTLFLTGRCDYLLGQNPPAIPSLPVFRVYCMV--SKAQFVIDWHNYAYSIMAMTLEPD 444
L+ L+ DYLL QNPP+IP+L V R Y + ++ + V+DWHN+ Y+I+A+ L
Sbjct: 121 LISLLYKLRGADYLLVQNPPSIPTLGVVRFYNLFLSTRTKVVLDWHNFGYTILALKLPET 180
Query: 445 HMLVRMARSTE 477
H +V+ A+ E
Sbjct: 181 HPMVKFAKFYE 191
Score = 57.6 bits (133), Expect = 1e-07
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = +3
Query: 9 RKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHPF 188
RK V+VLGD+GRSPRM YHA SLA +G V + Y P E+LNN +IK+H
Sbjct: 39 RKRTIVLVLGDLGRSPRMLYHARSLARSGHKVDLCGYDGAKPFDEILNN---DLIKIHHI 95
Query: 189 EL 194
L
Sbjct: 96 PL 97
>UniRef50_Q0DBH3 Cluster: Os06g0564800 protein; n=2; Oryza
sativa|Rep: Os06g0564800 protein - Oryza sativa subsp.
japonica (Rice)
Length = 416
Score = 58.4 bits (135), Expect = 8e-08
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +3
Query: 9 RKVAKVVVLGDIGRSPRMQYHALSLAN-NGLDVKIISYVETDPLPEVLNNPHITVIKLHP 185
R+ A VVLGDIGRSPRMQYH+LSLAN G++V I++ +DP + NP I + ++
Sbjct: 10 RRRAAAVVLGDIGRSPRMQYHSLSLANQGGMEVDIVANGGSDPHLLLRENPLIHIHEMKS 69
Query: 186 FEL 194
+L
Sbjct: 70 VQL 72
Score = 50.8 bits (116), Expect = 2e-05
Identities = 18/64 (28%), Positives = 39/64 (60%)
Frame = +1
Query: 271 LMYTLFLTGRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHM 450
+ Y F R D + QNPP++P+L ++ + A+ ++DWHN+ Y+++ ++ H+
Sbjct: 96 IWYLCFKIPRPDVFIVQNPPSVPTLAAVKLASGLRGAKSIVDWHNFGYTLLGLSHGRSHI 155
Query: 451 LVRM 462
+V++
Sbjct: 156 IVKI 159
>UniRef50_A7ECF7 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 381
Score = 58.4 bits (135), Expect = 8e-08
Identities = 27/50 (54%), Positives = 38/50 (76%)
Frame = +3
Query: 21 KVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITV 170
+V+VLGDIGRSPRMQYHA+S+A +G V +I Y E++ + +NP IT+
Sbjct: 16 QVLVLGDIGRSPRMQYHAMSIAKHGGRVDLIGYQESELPSGLTDNPLITI 65
Score = 51.2 bits (117), Expect = 1e-05
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +1
Query: 310 LLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRM 462
L+ NPP+IP+ V + C+V +IDWHNY ++I+A T H+ VR+
Sbjct: 62 LITINPPSIPTFFVAYLVCIVRNTHLIIDWHNYGWTILAGTRGSKHIFVRL 112
>UniRef50_Q5KNF4 Cluster: Beta-1,4-mannosyltransferase, putative;
n=2; Filobasidiella neoformans|Rep:
Beta-1,4-mannosyltransferase, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 506
Score = 57.2 bits (132), Expect = 2e-07
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +1
Query: 304 DYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMAR 468
+ LL QNPP+IP+L + + C+ +K + +IDWHN YSI+ + + LVR+A+
Sbjct: 144 EILLVQNPPSIPTLALAQFICLATKTKLIIDWHNTGYSILGLRVGEGSRLVRIAK 198
Score = 56.4 bits (130), Expect = 3e-07
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = +3
Query: 3 NVRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKL 179
++ A V+VLGDIGRSPRM YH+ SLA + ++ Y ET P +L NP + ++ L
Sbjct: 46 HLHHTATVLVLGDIGRSPRMMYHSESLARHNWRTFMVGYAETPPTSALLENPMVHLLGL 104
>UniRef50_O13933 Cluster: Chitobiosyldiphosphodolichol
beta-mannosyltransferase; n=1; Schizosaccharomyces
pombe|Rep: Chitobiosyldiphosphodolichol
beta-mannosyltransferase - Schizosaccharomyces pombe
(Fission yeast)
Length = 424
Score = 55.2 bits (127), Expect = 7e-07
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +1
Query: 271 LMYTLFLTGRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHM 450
L + LF+ +L QNPP IP + + ++ +F+IDWHN+ YSI+A+ L H
Sbjct: 111 LNWALFVRKPASFLFIQNPPCIPVFFIAQCLHILRGTKFIIDWHNFGYSILALKLGKQHT 170
Query: 451 LVRMARSTE 477
V++ + E
Sbjct: 171 FVKLLKIYE 179
Score = 45.2 bits (102), Expect = 8e-04
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +3
Query: 24 VVVLGDIGRSPRMQYHALSLANNGLDVKIISY 119
V+VLGDI RSPRMQYHA+S A G V ++ Y
Sbjct: 29 VLVLGDIARSPRMQYHAVSFAKLGWKVDLLGY 60
>UniRef50_A4S8H0 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 419
Score = 54.8 bits (126), Expect = 1e-06
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +1
Query: 271 LMYTLFLTGRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAM 429
L + L RC+ +L QNPP +P+ V + C + + V+DWHN+AY++ M
Sbjct: 88 LFWILMTMQRCEEMLIQNPPCVPTFLVCGIVCRARRTRLVVDWHNFAYTLFGM 140
Score = 48.4 bits (110), Expect = 8e-05
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +3
Query: 24 VVVLGDIGRSPRMQYHALSLANNG-LDVKIISYVETDPLPEVLNNPHITV 170
+VVLGD GRSPRMQYHALSLA + V ++ Y T P+ + +T+
Sbjct: 8 LVVLGDFGRSPRMQYHALSLARDADRAVDVVCYSGTPPIDALSREDAVTM 57
>UniRef50_Q4P5G4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 773
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +1
Query: 304 DYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMARSTE 477
+ +L Q PPA+P+L V + + K++ VIDWHN AY+I+A+ L LVR+A E
Sbjct: 142 ELILVQTPPALPTLLVVKAAAALVKSRVVIDWHNLAYTILALRLGEKSKLVRLAEWLE 199
Score = 48.0 bits (109), Expect = 1e-04
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = +3
Query: 18 AKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHI 164
A VVVLGDIGRSPRM H SLAN G V I+ Y + LP L I
Sbjct: 47 AAVVVLGDIGRSPRMCLHVESLANEGWKVAIVGYAGS-TLPPALQRSSI 94
>UniRef50_UPI0000498D6B Cluster: chitobiosyldiphosphodolichol
beta-mannosyltransferase; n=3; Entamoeba histolytica
HM-1:IMSS|Rep: chitobiosyldiphosphodolichol
beta-mannosyltransferase - Entamoeba histolytica
HM-1:IMSS
Length = 436
Score = 53.6 bits (123), Expect = 2e-06
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +3
Query: 24 VVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLH 182
V+VLGDIGRSPRM++H++ LA V I+ Y ET PL + N +I LH
Sbjct: 34 VLVLGDIGRSPRMEFHSIELAKI-CPVSIVCYEETQPLSSITENQNIVRYPLH 85
Score = 41.9 bits (94), Expect = 0.007
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 271 LMYTLFLTGRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIM 423
L LF ++L QNPP++PS + ++ ++DWHN AYSI+
Sbjct: 117 LYLLLFKLPNYSHILIQNPPSLPSFIIAAFVKFITGCTVIVDWHNTAYSIV 167
>UniRef50_A5B604 Cluster: Putative uncharacterized protein; n=2;
Magnoliophyta|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1144
Score = 53.2 bits (122), Expect = 3e-06
Identities = 27/40 (67%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = +3
Query: 18 AKVVVLGDIGRSPRMQYHALSLANN-GLDVKIISYVETDP 134
A VVVLGDIGRSPRMQYHALSLA L+V I++Y + P
Sbjct: 130 AAVVVLGDIGRSPRMQYHALSLARQASLEVDIVAYGVSTP 169
Score = 45.2 bits (102), Expect = 8e-04
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +1
Query: 304 DYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTL 435
D + QNPP++P+L + + + F++DWHN+ Y+++ ++L
Sbjct: 229 DVFIVQNPPSVPTLVAVKWASWLRNSAFIVDWHNFGYTLLGLSL 272
>UniRef50_P16661 Cluster: Chitobiosyldiphosphodolichol
beta-mannosyltransferase; n=6; Saccharomycetales|Rep:
Chitobiosyldiphosphodolichol beta-mannosyltransferase -
Saccharomyces cerevisiae (Baker's yeast)
Length = 449
Score = 52.8 bits (121), Expect = 4e-06
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 NVRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVL-NNPHITVIKL 179
+ +K + VLGD+G SPR+ YHA+S + G V++ YVE D LP+++ ++P+ITV +
Sbjct: 36 STKKRIIIFVLGDVGHSPRICYHAISFSKLGWQVELCGYVE-DTLPKIISSDPNITVHHM 94
Query: 180 HPFELKWG 203
+ K G
Sbjct: 95 SNLKRKGG 102
Score = 51.6 bits (118), Expect = 9e-06
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = +1
Query: 304 DYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPD--HMLVRMARSTE 477
DY+L QNPP+IP LP+ +Y ++ + +IDWHN AYSI+ + + + H LV ++ E
Sbjct: 131 DYILVQNPPSIPILPIAVLY-KLTGCKLIIDWHNLAYSILQLKFKGNFYHPLVLISYMVE 189
>UniRef50_Q5BLW4 Cluster: Beta-1,4-mannosyltransferase; n=5;
Aspergillus|Rep: Beta-1,4-mannosyltransferase -
Aspergillus fumigatus (Sartorya fumigata)
Length = 505
Score = 52.4 bits (120), Expect = 5e-06
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = +1
Query: 319 QNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMAR 468
QNPP+IP+L + + ++ +IDWHN+ Y+I+A+ L H LVR ++
Sbjct: 191 QNPPSIPTLAIASTASFLRHSKLIIDWHNFGYTILALKLGDRHPLVRFSK 240
Score = 51.6 bits (118), Expect = 9e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 9 RKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISY 119
+ +++VLGDIGRSPRMQYHA+S+A G V II Y
Sbjct: 44 KTTTQILVLGDIGRSPRMQYHAISIARGGGQVDIIGY 80
>UniRef50_Q23MP4 Cluster: Similar to chitobiosyldiphosphodolichol
beta-mannosyltransferase; n=1; Tetrahymena thermophila
SB210|Rep: Similar to chitobiosyldiphosphodolichol
beta-mannosyltransferase - Tetrahymena thermophila SB210
Length = 465
Score = 52.0 bits (119), Expect = 7e-06
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +3
Query: 9 RKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKL 179
++VA V+V GDIGRSPRM+ H+ LA G +V + +E + +NP+I +I +
Sbjct: 4 KQVASVIVFGDIGRSPRMKNHSTQLAQAGYEVYFVGQLENQVHKVIRDNPNIKIIDI 60
Score = 49.6 bits (113), Expect = 4e-05
Identities = 18/52 (34%), Positives = 35/52 (67%)
Frame = +1
Query: 283 LFLTGRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLE 438
LF + ++++ QNPP+IP L + C + + + ++D+HNY Y+I+A+ L+
Sbjct: 96 LFKMPKPEFVIIQNPPSIPVLSSLAIICFMRRIKMIVDFHNYGYTILALGLK 147
>UniRef50_A0BGC6 Cluster: Chromosome undetermined scaffold_106,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_106,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 433
Score = 52.0 bits (119), Expect = 7e-06
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +3
Query: 12 KVAKVVVLGDIGRSPRMQYHALSLANN-GLDVKIISYVETDPLPEVLNNPHITVIKLH 182
K ++V GDIGRSPRM HAL++A+N + Y++ P +L+NP+I ++ L+
Sbjct: 2 KQCSIIVFGDIGRSPRMVNHALAIADNTEYRINFYGYLDNKPTQALLSNPNIRIVDLN 59
Score = 52.0 bits (119), Expect = 7e-06
Identities = 24/69 (34%), Positives = 45/69 (65%)
Frame = +1
Query: 271 LMYTLFLTGRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHM 450
L L + + +++L QNPP+IP L V + + +++ +ID+HNY ++I+A+ + ++
Sbjct: 89 LFLLLLFSRKQEFILVQNPPSIPVLQVVSLIKALRRSKIIIDFHNYGHTILALQMRNKYI 148
Query: 451 LVRMARSTE 477
L +MARS E
Sbjct: 149 L-KMARSYE 156
>UniRef50_A2G6B1 Cluster: Glycosyl transferase, group 1 family
protein; n=1; Trichomonas vaginalis G3|Rep: Glycosyl
transferase, group 1 family protein - Trichomonas
vaginalis G3
Length = 389
Score = 49.2 bits (112), Expect = 5e-05
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +1
Query: 271 LMYTLFLTGRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIM 423
L +F R + +L QNPP IP+LP + ++ +FVIDWHN +SI+
Sbjct: 84 LFLLIFTLPRFELVLAQNPPTIPTLPFCWLLRVIKGKRFVIDWHNLGWSIL 134
Score = 44.4 bits (100), Expect = 0.001
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 24 VVVLGDIGRSPRMQYHALSLAN-NGLDVKIISYVETDPLPEVLNNPHITVIKLHPF 188
VVVLGD+GRSPRMQ HA+ L+ V ++ Y E+ E+ + ++ + + PF
Sbjct: 6 VVVLGDLGRSPRMQNHAVCLSKLPNARVHLVGYNESPLFKELQESKNVVIHPIKPF 61
>UniRef50_Q6BS98 Cluster: Chitobiosyldiphosphodolichol
beta-mannosyltransferase; n=6; Saccharomycetales|Rep:
Chitobiosyldiphosphodolichol beta-mannosyltransferase -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 472
Score = 49.2 bits (112), Expect = 5e-05
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +1
Query: 304 DYLLGQNPPAIPSLPVFRVYCMV--SKAQFVIDWHNYAYSIMAMTLEP-DHMLVRMARST 474
DY+L QNPP+IP L + Y V K + +IDWHN Y+I+ + + H LVR+ ++
Sbjct: 147 DYVLIQNPPSIPILLIVLAYIKVFSRKTKLIIDWHNLNYTILNLKFQNLKHPLVRILKTY 206
Query: 475 E 477
E
Sbjct: 207 E 207
Score = 45.2 bits (102), Expect = 8e-04
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +3
Query: 9 RKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITV 170
RK + VLGD+G SPRM YHA S + V + Y+E P +++++ +I +
Sbjct: 54 RKTVSIFVLGDLGHSPRMCYHAKSFSKLDYYVNLCGYLEEQPPFDIIDDINIDI 107
>UniRef50_Q5C3W1 Cluster: SJCHGC03360 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03360 protein - Schistosoma
japonicum (Blood fluke)
Length = 190
Score = 47.2 bits (107), Expect = 2e-04
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 271 LMYTLFLTGRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHM 450
L + L R +L QNPPA+P+ V ++ ++ VIDWHNY Y+++ + +
Sbjct: 94 LFFHLIKHCRSHLILIQNPPAVPTFIVVWIFMKITGRSLVIDWHNYGYTLVELISSRKSV 153
Query: 451 LVRM 462
R+
Sbjct: 154 FARL 157
Score = 38.3 bits (85), Expect = 0.088
Identities = 25/77 (32%), Positives = 35/77 (45%)
Frame = +3
Query: 9 RKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHPF 188
++ A V+VLGD+ RSPR+ A LA +G DV I Y P + + F
Sbjct: 13 KRSAHVIVLGDLSRSPRILSQAQFLARDGWDVTISGYKPDSISPSNFKLRVLNIPTCPDF 72
Query: 189 ELKWGPVVLKYISPFQF 239
+ P L +I F F
Sbjct: 73 KALHFPSFLVFIFKFIF 89
>UniRef50_Q00U34 Cluster: Beta-1,4-mannosyltransferase; n=1;
Ostreococcus tauri|Rep: Beta-1,4-mannosyltransferase -
Ostreococcus tauri
Length = 391
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +1
Query: 271 LMYTLFLTGRCDYLLGQNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIMAMTLEPDHM 450
L + L R ++ QNPP +P+ V C + + VIDWHN A+++ M +
Sbjct: 38 LTFILCTIQRPKRMVVQNPPCVPTFLACGVVCWMRGIELVIDWHNLAFTLFGMKYGSETR 97
Query: 451 LVRMARSTE 477
+ +M E
Sbjct: 98 VAKMCERHE 106
>UniRef50_Q388S6 Cluster: Glycosyltransferase, putative; n=3;
Trypanosoma|Rep: Glycosyltransferase, putative -
Trypanosoma brucei
Length = 610
Score = 41.9 bits (94), Expect = 0.007
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +3
Query: 6 VRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKII 113
+R+V VVV GD RSPRMQYHALSLA G+ +++
Sbjct: 69 LRRVV-VVVGGDFARSPRMQYHALSLAKCGMFQEVV 103
>UniRef50_Q5CYM2 Cluster: ALG1 like beta-1,4 mannosyltransferase
with possible signal peptide; n=2; Cryptosporidium|Rep:
ALG1 like beta-1,4 mannosyltransferase with possible
signal peptide - Cryptosporidium parvum Iowa II
Length = 680
Score = 41.5 bits (93), Expect = 0.009
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 319 QNPPAIPSLPVFRVYCMVSKAQFVIDWHNYAYSIM 423
Q PP+IP++P+ + + A +IDWHNY ++++
Sbjct: 176 QAPPSIPAIPIALLVSYIKGAHLIIDWHNYGHTLL 210
Score = 36.7 bits (81), Expect = 0.27
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 9 RKVAKVVVLGDIGRSPRMQYHALSLA 86
R +A V+V+GDIGRSPRMQ HAL ++
Sbjct: 44 RNIA-VLVIGDIGRSPRMQNHALCIS 68
>UniRef50_Q4QDV2 Cluster: Glycosyltransferase, putative; n=3;
Leishmania|Rep: Glycosyltransferase, putative -
Leishmania major
Length = 874
Score = 38.3 bits (85), Expect = 0.088
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +3
Query: 18 AKVVVLGDIGRSPRMQYHALSLANNGL 98
A V+V GD RSPRMQYHA SLA + L
Sbjct: 152 AVVLVGGDFARSPRMQYHAASLARSSL 178
>UniRef50_UPI0000E48881 Cluster: PREDICTED: hypothetical protein; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1502
Score = 33.9 bits (74), Expect = 1.9
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +3
Query: 54 PRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHPFELKWGPV 209
P Q +A+ ++I Y E P P + P ITV++LHP EL GP+
Sbjct: 1185 PSQQAPLPQMASTPTQPRVIQYQEQPPRP-MAPEPPITVVRLHPVEL--GPI 1233
>UniRef50_Q9VBC7 Cluster: CG6438-PA; n=44; Coelomata|Rep: CG6438-PA
- Drosophila melanogaster (Fruit fly)
Length = 654
Score = 32.7 bits (71), Expect = 4.4
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 237 FERMKFMTECKLNVYPIPYWKVRLFVGPEPTRHTILASLSCVLHGFK 377
F + FMT YP WK+ TRH L S VLHG K
Sbjct: 579 FTKWPFMTTHSWGEYPQGTWKLEARFNSPQTRHGNLLEWSLVLHGTK 625
>UniRef50_A7SL37 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 477
Score = 31.9 bits (69), Expect = 7.7
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 163 ICGLFRTSGSGSVSTYEIIFTSKPLLARDNA 71
IC LFR G +++YE+ T +PL A+ NA
Sbjct: 393 ICILFRFGSKGFLTSYEMCLTRRPLGAKTNA 423
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,319,574
Number of Sequences: 1657284
Number of extensions: 12371704
Number of successful extensions: 27288
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 26479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27275
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -