Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10555X
         (479 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    27   0.068
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   5.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   5.9  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   5.9  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   5.9  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   5.9  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   7.8  

>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 27.5 bits (58), Expect = 0.068
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +3

Query: 165 TVIKLHPFELKWGPVVLKYISPFQFERMKFMTECKLNVYPIPY 293
           T+++LH ++L + PV+  Y  P +F+  +F+ E     +P  Y
Sbjct: 85  TILQLHIYDLHYNPVI--YPEPEKFDPDRFLPENCDKRHPYAY 125


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -1

Query: 446  WSGSRVMAIIEYA*LCQSITNWAFETMQYTRKTGKD 339
            W+G  +   + Y  L  S   + FET+++ R+ GK+
Sbjct: 1024 WNGDILGYYVGYR-LANSDKPYLFETVEFGREEGKE 1058


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 72  ALSLANNGLDVKIISYVETDPLPEVLN 152
           A  +A  GLD+K + +V    LP+ ++
Sbjct: 465 ATGVAARGLDIKDVQHVINYDLPKSID 491


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 333 HTILASLSCVLH 368
           HT+L   SC+LH
Sbjct: 270 HTLLILFSCLLH 281


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 333 HTILASLSCVLHGFKGPVCDRLAQL 407
           H  +A   C L+GF   + D   QL
Sbjct: 209 HRAIAQSGCALNGFARGIPDTSKQL 233


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 333 HTILASLSCVLHGFKGPVCDRLAQL 407
           H  +A   C L+GF   + D   QL
Sbjct: 207 HRAIAQSGCALNGFARGIPDTSKQL 231


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 333 HTILASLSCVLHGFKGPVCDRLAQL 407
           H  +A   C L+GF   + D   QL
Sbjct: 209 HRAIAQSGCALNGFARGIPDTSKQL 233


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +1

Query: 394 DWHNYAYSIMAMTLEPDH 447
           D+HN  + ++    +PDH
Sbjct: 361 DFHNMGHILIGYIHDPDH 378


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 184 G*SFMTVICGLFRTS 140
           G SF++++  LFRT+
Sbjct: 253 GNSFLSIVLALFRTA 267


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 184 G*SFMTVICGLFRTS 140
           G SF++++  LFRT+
Sbjct: 271 GNSFLSIVLALFRTA 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,679
Number of Sequences: 336
Number of extensions: 3256
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)