Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10553
(655 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 1e-43
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 171 6e-43
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 169 1e-42
SB_56| Best HMM Match : Actin (HMM E-Value=0) 169 1e-42
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 169 2e-42
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 168 4e-42
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 150 8e-37
SB_54| Best HMM Match : Actin (HMM E-Value=0) 107 1e-23
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 4e-18
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 59 4e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 58 8e-09
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 52 4e-07
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 41 0.001
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 4.4
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 4.4
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 7.6
SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07) 28 7.6
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 28 7.6
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 173 bits (421), Expect = 1e-43
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTVMSGGTTMYPG+ADRMQKEI+ALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 266 DLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLST 325
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 326 FQQMWISKQEYDESGPAIVHRKCF 349
Score = 165 bits (402), Expect = 2e-41
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVALDFEQEM TAA+S+S+EKSYELPDGQVITIGNERFRCPEAL QPSFL
Sbjct: 182 IVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFL 241
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCDVDIRK
Sbjct: 242 GMESSGIHETTYNSIMKCDVDIRK 265
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 171 bits (415), Expect = 6e-43
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGGTTMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 255 DLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLST 314
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 315 FQQMWISKQEYDESGPAIVHRKCF 338
Score = 168 bits (409), Expect = 3e-42
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFL
Sbjct: 171 IVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFL 230
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCDVDIRK
Sbjct: 231 GMESAGIHETTYNSIMKCDVDIRK 254
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 169 bits (412), Expect = 1e-42
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 168 bits (409), Expect = 3e-42
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFL
Sbjct: 209 IVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFL 268
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCDVDIRK
Sbjct: 269 GMESAGIHETTYNSIMKCDVDIRK 292
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 169 bits (412), Expect = 1e-42
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 292 DLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLST 351
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 352 FQQMWISKQEYDESGPSIVHRKCF 375
Score = 168 bits (409), Expect = 3e-42
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFL
Sbjct: 208 IVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFL 267
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCDVDIRK
Sbjct: 268 GMESAGIHETTYNSIMKCDVDIRK 291
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 169 bits (411), Expect = 2e-42
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGG+TMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 169 bits (410), Expect = 2e-42
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFL
Sbjct: 209 IVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFL 268
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCDVDIRK
Sbjct: 269 GMESAGIHETTYNSIMKCDVDIRK 292
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 168 bits (408), Expect = 4e-42
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKL YVALDFEQEMATAAAS+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFL
Sbjct: 208 IVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFL 267
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCDVDIRK
Sbjct: 268 GMESAGIHETTYNSIMKCDVDIRK 291
Score = 167 bits (407), Expect = 5e-42
Identities = 76/84 (90%), Positives = 82/84 (97%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGG+TM+PGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 292 DLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLST 351
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 352 FQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 150 bits (364), Expect = 8e-37
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLY+N V+SGG+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSVWIGGSILASLST
Sbjct: 66 DLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLST 125
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWI+KEEY E GP IVHRKCF
Sbjct: 126 FQQMWIAKEEYHEYGPPIVHRKCF 149
Score = 110 bits (265), Expect = 8e-25
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = +3
Query: 72 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 251
A S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGME+ GIHE +YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 252 K 254
K
Sbjct: 65 K 65
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 107 bits (256), Expect = 1e-23
Identities = 47/83 (56%), Positives = 60/83 (72%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
I+RD+KE LCY A+D+E+E+ A S E Y LPDGQ I IG+ERFR E LFQPS L
Sbjct: 2253 IIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLL 2312
Query: 183 GMESCGIHETVYNSIMKCDVDIR 251
G + GIHE+++ SI KCD+D+R
Sbjct: 2313 GRDIDGIHESIFKSIKKCDIDLR 2335
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 88.6 bits (210), Expect = 4e-18
Identities = 39/82 (47%), Positives = 53/82 (64%)
Frame = +3
Query: 6 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 185
VR +KEKLCYV + EQE A +T L + Y LPDG+V+ + ERF PEALFQP +
Sbjct: 213 VRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLIN 272
Query: 186 MESCGIHETVYNSIMKCDVDIR 251
+E G+ E ++N+I D+D R
Sbjct: 273 VEGVGVAELLFNTIQAADIDTR 294
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +2
Query: 257 LYANTVMSGGTTMYPGIADRMQKEITA-LAPSTIKIKIIAPPERKYSVWIGGSILAS-LS 430
LY V+ G T+ Q +TA KI+I PP RK+ V++GG++LA +
Sbjct: 324 LYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMK 383
Query: 431 TFQQMWISKEEYDESG 478
W++++EY+E G
Sbjct: 384 DKDSFWMTRKEYEEKG 399
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 58.8 bits (136), Expect = 4e-09
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 16/106 (15%)
Frame = +2
Query: 257 LYANTVMSGGTTMYPGIADRMQKEITA----------------LAPSTIKIKIIAPPERK 388
LY N V+SGG+TM+ R+Q++I + P I+ ++I+ ++
Sbjct: 242 LYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQR 301
Query: 389 YSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF*QRARVT 526
Y+VW GGS+LAS F + +K +YDE GP I F R ++
Sbjct: 302 YAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPFLHRDEIS 347
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRK 254
+ + ERF PE F P F + + + E V N I C +D+R+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRR 240
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 57.6 bits (133), Expect = 8e-09
Identities = 28/60 (46%), Positives = 37/60 (61%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IV DIKEK+CY++ D +E+ + L K Y LPDGQ+I+IG E E LF+P L
Sbjct: 839 IVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/60 (35%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +2
Query: 257 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIA---PPERKYSVWIGGSILASL 427
L+ + +++GG T+ G +R+ +E+ + P ++++K+I+ E++++ WIGGSILASL
Sbjct: 171 LFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Frame = +2
Query: 257 LYANTVMSGGTTMYPGIADRMQKEITALAPST-------IK-IKIIAPP-ERKYSVWIGG 409
L N V+ GGT M PG R+ +EI L S IK +K+ PP + W+GG
Sbjct: 77 LAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNANITAWLGG 136
Query: 410 SILASLSTFQQMWISKEEYDE 472
+I SL ++E Y +
Sbjct: 137 AIFGSLEVLADRSTTRERYQQ 157
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEM 62
IVRDIKEKLCYVALDF QE+
Sbjct: 87 IVRDIKEKLCYVALDFYQEI 106
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 153 PEALFQPSFLGMESCGIHETV 215
PE +FQPS LG+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 304 YRRQDAEGDHRPRALDHQDQDHRSPREE 387
+RRQDA DHR + DH QD PR++
Sbjct: 664 HRRQDA--DHRRQDADHHRQDVVHPRQD 689
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 414 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 277
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 266 NTVMSGGTTMYPGIADRMQKEITALAP 346
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 263 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 382
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 18 KEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPE 158
+EK+ L+ E E A + LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07)
Length = 423
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -1
Query: 613 RCSVLRYH*VQRTDGCVQNSDEHNTTQHRGHAGALLEALAVDDAGAGLV 467
R V+ H VQR + ++ +E QHR H ++E +D G +
Sbjct: 115 RMKVINSHKVQRMEQAKKHKEEIEKNQHRPHHIPIVEKTNEEDKEVGRI 163
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATA---AASTSLEKSYELPD 113
++ +KE CYV+ F ++M A ++ + Y LPD
Sbjct: 395 VINQVKEDTCYVSSQFYKDMEIARQRGKENTIVREYVLPD 434
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,341,157
Number of Sequences: 59808
Number of extensions: 384902
Number of successful extensions: 1218
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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