Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10553
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 174 4e-44
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 174 4e-44
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 174 4e-44
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 174 4e-44
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 174 4e-44
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 174 4e-44
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 174 4e-44
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 174 4e-44
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 174 4e-44
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 169 2e-42
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 166 1e-41
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 98 4e-21
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 94 9e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 90 1e-18
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 61 6e-10
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 47 1e-05
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.13
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 3.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 174 bits (424), Expect = 4e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 169 bits (410), Expect = 2e-42
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFL
Sbjct: 209 IVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFL 268
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCD+DIRK
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRK 292
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 174 bits (424), Expect = 4e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 169 bits (412), Expect = 1e-42
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFL
Sbjct: 209 IVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFL 268
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCD+DIRK
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRK 292
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 174 bits (424), Expect = 4e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 169 bits (410), Expect = 2e-42
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFL
Sbjct: 209 IVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFL 268
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCD+DIRK
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRK 292
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 174 bits (424), Expect = 4e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 169 bits (412), Expect = 1e-42
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFL
Sbjct: 209 IVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFL 268
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCD+DIRK
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRK 292
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 174 bits (424), Expect = 4e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 169 bits (412), Expect = 1e-42
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFL
Sbjct: 209 IVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFL 268
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCD+DIRK
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRK 292
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 174 bits (424), Expect = 4e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 169 bits (410), Expect = 2e-42
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFL
Sbjct: 209 IVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFL 268
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCD+DIRK
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRK 292
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 174 bits (424), Expect = 4e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 249 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 308
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 309 FQQMWISKQEYDESGPSIVHRKCF 332
Score = 169 bits (412), Expect = 1e-42
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFL
Sbjct: 165 IVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFL 224
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCD+DIRK
Sbjct: 225 GMESAGIHETSYNSIMKCDIDIRK 248
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 174 bits (424), Expect = 4e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 279 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 338
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 339 FQQMWISKQEYDESGPSIVHRKCF 362
Score = 169 bits (412), Expect = 1e-42
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFL
Sbjct: 195 IVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFL 254
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCD+DIRK
Sbjct: 255 GMESAGIHETSYNSIMKCDIDIRK 278
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 174 bits (424), Expect = 4e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
Score = 169 bits (412), Expect = 1e-42
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFL
Sbjct: 209 IVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFL 268
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCD+DIRK
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRK 292
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 169 bits (410), Expect = 2e-42
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFL
Sbjct: 209 IVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFL 268
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GMES GIHET YNSIMKCD+DIRK
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRK 292
Score = 168 bits (409), Expect = 3e-42
Identities = 79/84 (94%), Positives = 82/84 (97%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGGTTMYPGIADRMQKEITALAP T+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLST 351
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 352 FQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 166 bits (404), Expect = 1e-41
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLST 433
DLYANTV+SGGT+M+PGIADRMQKEI LAPST+KIKIIAPPERKYSVWIGGSILASLST
Sbjct: 292 DLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLST 351
Query: 434 FQQMWISKEEYDESGPGIVHRKCF 505
FQQMWISK+EYDESGP IVHRKCF
Sbjct: 352 FQQMWISKQEYDESGPSIVHRKCF 375
Score = 155 bits (377), Expect = 2e-38
Identities = 71/84 (84%), Positives = 76/84 (90%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVRDIKEKLCYVA DFE E+A AA+S+SLEKSYELPDGQVITIGNERFRCPE LFQP+F+
Sbjct: 208 IVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFI 267
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
GME GIHET Y SIMKCDVDIRK
Sbjct: 268 GMEGAGIHETTYQSIMKCDVDIRK 291
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 98.3 bits (234), Expect = 4e-21
Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = +2
Query: 257 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASL 427
L++N ++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL
Sbjct: 351 LFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSL 410
Query: 428 STFQQMWISKEEYDESGPGIVHRKC 502
TFQQMW+SK EYDESG IV +KC
Sbjct: 411 GTFQQMWVSKAEYDESGKSIVEKKC 435
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 99 YELPDGQVITIGNERFRCPEALFQPSFLGME 191
Y P+G G ER + PE LF +L E
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAE 323
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 93.9 bits (223), Expect = 9e-20
Identities = 40/83 (48%), Positives = 59/83 (71%)
Frame = +2
Query: 257 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 436
LY+N V+SGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF
Sbjct: 292 LYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTF 351
Query: 437 QQMWISKEEYDESGPGIVHRKCF 505
++MW+ K+EY++ G +H++ F
Sbjct: 352 RKMWLGKKEYEDMGASAMHKRFF 374
Score = 78.2 bits (184), Expect = 5e-15
Identities = 40/84 (47%), Positives = 51/84 (60%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 182
IVR++KE CY+ALD T + S++ SY LPD I I N FR PE LF+P +
Sbjct: 212 IVREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLI 266
Query: 183 GMESCGIHETVYNSIMKCDVDIRK 254
G E G+ V SIMKCDVD+R+
Sbjct: 267 GTEWPGMAHVVNQSIMKCDVDLRQ 290
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/82 (48%), Positives = 52/82 (63%)
Frame = +3
Query: 6 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 185
VR +KEKLCY+A D EQE A +T L + Y LPDG+VI +G ERF PE LFQP +
Sbjct: 213 VRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLIN 272
Query: 186 MESCGIHETVYNSIMKCDVDIR 251
+E G+ E ++ I D+D R
Sbjct: 273 VEKAGLSELLFGCIQASDIDTR 294
Score = 74.5 bits (175), Expect = 6e-14
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 13/88 (14%)
Frame = +2
Query: 254 DLYANTVMSGGTTMYPGIADRMQKEITAL-----------APSTIKIKIIAPPERKYSVW 400
D Y + V+SGGTTMYPG+ R++KE+ L A KI+I APP RK+ V+
Sbjct: 296 DFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVF 355
Query: 401 IGGSILASL--STFQQMWISKEEYDESG 478
+GG++LA+L Q W+SK+EY+E G
Sbjct: 356 LGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 61.3 bits (142), Expect = 6e-10
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 16/93 (17%)
Frame = +2
Query: 257 LYANTVMSGGTTMYPGIADRMQKEITALA----------------PSTIKIKIIAPPERK 388
LY N V+SGG+TM+ A ++Q+++ L+ P I +++I+ ++
Sbjct: 322 LYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQR 381
Query: 389 YSVWIGGSILASLSTFQQMWISKEEYDESGPGI 487
Y+VW GGS+LAS S F Q+ +K EY E GP I
Sbjct: 382 YAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
Score = 41.5 bits (93), Expect = 5e-04
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDG-QVIT-------IGNERFRCPE 158
+ + IKEK CYV D +E T K DG IT +G ERF PE
Sbjct: 230 VAKMIKEKFCYVCPDVMKEFVKY--DTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPE 287
Query: 159 ALFQPSFLGME-SCGIHETVYNSIMKCDVDIRK 254
F P F E + I +T+ I +C +D+R+
Sbjct: 288 IFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRR 320
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Frame = +2
Query: 218 QLHHEVRRRHP*D----LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPER 385
QL HE + P D LY N ++GG ++ PGIA+++++E++ + P+TI ++ P R
Sbjct: 454 QLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWR 513
Query: 386 KYSVWIGGSILASLSTFQQMWISKEE 463
+ ++G I+AS STF+ IS ++
Sbjct: 514 YNAAYLGAQIVASASTFEDSCISLQQ 539
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNERFRCPEALFQP 173
I+R E+ YV D+++E + T SL+ P Q I N RF C E LF+P
Sbjct: 383 ILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKP 442
Query: 174 SFLGMESCGIHETVYNSIMKCDVDIRK 254
G+++ G+H+ ++ +I++C +D R+
Sbjct: 443 KKWGLDTKGLHQLIHEAILQCPIDSRR 469
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 22/105 (20%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD------GQV----------- 122
++ + KE LC+V+ +F++ M A + K Y +PD G V
Sbjct: 201 VINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQI 260
Query: 123 --ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 251
I +G ERF PE LF PS + ++ CG+ E V SI +C +R
Sbjct: 261 PSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALR 305
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/80 (23%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = +2
Query: 257 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASL 427
L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 428 STFQQMWISKEEYDESGPGI 487
+ + WI+++++DE G +
Sbjct: 364 TASKVPWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 22/105 (20%)
Frame = +3
Query: 3 IVRDIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD------GQV----------- 122
++ + KE LC+V+ +F++ M A + K Y +PD G V
Sbjct: 201 VINECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQI 260
Query: 123 --ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 251
I +G ERF PE LF PS + ++ CG+ E V SI +C +R
Sbjct: 261 PSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALR 305
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/80 (23%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = +2
Query: 257 LYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASL 427
L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 428 STFQQMWISKEEYDESGPGI 487
+ + WI+++++DE G +
Sbjct: 364 TASKVPWINRKDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.13
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Frame = +2
Query: 257 LYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP----PERK----YSVWIGG 409
L+ N +++GG + PG+ R+++EI + + KI +I E K + W+G
Sbjct: 209 LFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGA 268
Query: 410 SILASL-STFQQMWISKEEY 466
S+L SL T ++ ++ EE+
Sbjct: 269 SLLGSLRETIERKSLTLEEW 288
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 298 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 396
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,009,839
Number of Sequences: 27780
Number of extensions: 258715
Number of successful extensions: 782
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -