Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10551
         (528 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.1  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    22   4.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.8  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 462 IGGSAYASAMVTSTSTPGS 406
           +G  +Y +A + +TSTPGS
Sbjct: 220 MGRPSYTTATMATTSTPGS 238


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
          protein protein.
          Length = 166

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 96 TLQRLPCCLLNSGRD 52
          TL R PC LLN   D
Sbjct: 22 TLGRFPCLLLNGKXD 36


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 292 SFTGGDTQDLGWQRT 248
           SF G D   LGW  T
Sbjct: 286 SFAGSDVTVLGWGHT 300


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,771
Number of Sequences: 438
Number of extensions: 2786
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)