Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10550
         (419 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   3.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.4  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   6.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   6.4  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    20   8.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   8.5  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 404 HRIDKFIKNLNA 369
           HR+ K IK LNA
Sbjct: 220 HRLSKLIKQLNA 231


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 255 AQCCRPLNFRSMLVQQRLCFLP 190
           A  CR   FR+   +  +CF P
Sbjct: 386 ANSCRSSTFRNNRDEYNVCFRP 407


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 227 RKFSGRQHCAQLTAAAMVAPTP*GDAKHHPFSTSLQ 334
           RK S R +  + T+     PTP GD++  P   SL+
Sbjct: 343 RKVSPRVNTIKHTSCI---PTPNGDSRLPPLEISLK 375


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 227 RKFSGRQHCAQLTAAAMVAPTP*GDAKHHPFSTSLQ 334
           RK S R +  + T+     PTP GD++  P   SL+
Sbjct: 343 RKVSPRVNTIKHTSCI---PTPNGDSRLPPLEISLK 375


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -1

Query: 212 SSGCASCRYSR*AETEH 162
           S GC +C Y    E+ H
Sbjct: 33  SQGCKACGYHSPLESNH 49


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 327 RSRIGPFLFY 356
           R R+ P+LFY
Sbjct: 115 RDRVNPYLFY 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,301
Number of Sequences: 336
Number of extensions: 2006
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)