Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10550
         (419 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118487-1|AAM49856.1|  870|Drosophila melanogaster LD01372p pro...    32   0.27 
AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA...    32   0.27 
BT023844-1|AAZ86765.1|  582|Drosophila melanogaster IP14442p pro...    28   4.4  
AY119270-1|AAM51130.1|  582|Drosophila melanogaster SD24632p pro...    28   4.4  
AE014134-1245|AAF52490.1|  580|Drosophila melanogaster CG4496-PA...    28   4.4  
AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alph...    27   7.7  
AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-P...    27   7.7  
AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-P...    27   7.7  

>AY118487-1|AAM49856.1|  870|Drosophila melanogaster LD01372p
           protein.
          Length = 870

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +2

Query: 176 LSGNSGRKHSRCCTSILRKFSGRQHCAQLTAAA 274
           LSG+S   HSR  T++LRK S +QH   L A +
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQHTNSLRAVS 220


>AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA
           protein.
          Length = 2139

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +2

Query: 176 LSGNSGRKHSRCCTSILRKFSGRQHCAQLTAAA 274
           LSG+S   HSR  T++LRK S +QH   L A +
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQHTNSLRAVS 220


>BT023844-1|AAZ86765.1|  582|Drosophila melanogaster IP14442p
           protein.
          Length = 582

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = -3

Query: 258 CAQCCRPLNFRSMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHILQHRRPR 100
           C  C RP   R  L +  +      P S ++ R+P  E +  + H++ H R R
Sbjct: 435 CPLCHRPFGTRHNLKRHYMIHTGEKPFSCSKCRKPFRECSTLKKHMVTHVRDR 487


>AY119270-1|AAM51130.1|  582|Drosophila melanogaster SD24632p
           protein.
          Length = 582

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = -3

Query: 258 CAQCCRPLNFRSMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHILQHRRPR 100
           C  C RP   R  L +  +      P S ++ R+P  E +  + H++ H R R
Sbjct: 435 CPLCHRPFGTRHNLKRHYMIHTGEKPFSCSKCRKPFRECSTLKKHMVTHVRDR 487


>AE014134-1245|AAF52490.1|  580|Drosophila melanogaster CG4496-PA
           protein.
          Length = 580

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = -3

Query: 258 CAQCCRPLNFRSMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHILQHRRPR 100
           C  C RP   R  L +  +      P S ++ R+P  E +  + H++ H R R
Sbjct: 433 CPLCHRPFGTRHNLKRHYMIHTGEKPFSCSKCRKPFRECSTLKKHMVTHVRDR 485


>AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alpha1,2
            protein.
          Length = 3367

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
 Frame = +2

Query: 65   KEHGASSCISGKRGRRC--CNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSILRKFS 238
            K  G  +C++   GRRC  C   HW           R    G+ G + +        K  
Sbjct: 1164 KRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCKIG 1223

Query: 239  -GRQHCAQLT 265
             G QHC + T
Sbjct: 1224 VGGQHCNECT 1233


>AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-PA,
            isoform A protein.
          Length = 2731

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
 Frame = +2

Query: 65   KEHGASSCISGKRGRRC--CNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSILRKFS 238
            K  G  +C++   GRRC  C   HW           R    G+ G + +        K  
Sbjct: 1164 KRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCKIG 1223

Query: 239  -GRQHCAQLT 265
             G QHC + T
Sbjct: 1224 VGGQHCNECT 1233


>AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-PB,
            isoform B protein.
          Length = 3375

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
 Frame = +2

Query: 65   KEHGASSCISGKRGRRC--CNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSILRKFS 238
            K  G  +C++   GRRC  C   HW           R    G+ G + +        K  
Sbjct: 1164 KRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCKIG 1223

Query: 239  -GRQHCAQLT 265
             G QHC + T
Sbjct: 1224 VGGQHCNECT 1233


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,670,917
Number of Sequences: 53049
Number of extensions: 369716
Number of successful extensions: 678
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)