Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10549
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    47   2e-04
UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole...    32   6.8  
UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12...    32   6.8  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 47.2 bits (107), Expect = 2e-04
 Identities = 19/24 (79%), Positives = 24/24 (100%)
 Frame = +1

Query: 313 YYGNLVAGSIVSQLTAAAMVAPTP 384
           YYGN+VAGS++SQLT+AAM+APTP
Sbjct: 51  YYGNVVAGSVISQLTSAAMLAPTP 74



 Score = 32.7 bits (71), Expect = 5.1
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +2

Query: 212 IYGTGGLLTPLVAP 253
           IYGTGGLLTP+VAP
Sbjct: 17  IYGTGGLLTPIVAP 30


>UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF3766,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 328

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -2

Query: 260 PSWEPLMESTDPQCHILQHRRPRLPLMQLE 171
           P+ +PL   T+P+  +LQ+RRP+L L  L+
Sbjct: 4   PAEQPLSLRTEPKLRVLQYRRPKLELQLLK 33


>UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12;
           Bacilli|Rep: Pyrrolidone-carboxylate peptidase -
           Bacillus subtilis
          Length = 215

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 127 LRIARREQKLKEHGASSCISGKRGRRCCNIWHWGSVDSIS 246
           L + R   K+KEHG  + +S   G   CN   +G +D IS
Sbjct: 117 LPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYGLMDHIS 156


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,627,039
Number of Sequences: 1657284
Number of extensions: 8524406
Number of successful extensions: 18404
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18352
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)