Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10546X
(383 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1436|AAF58537.2| 832|Drosophila melanogaster CG13164-P... 43 1e-04
AE014134-231|AAF51393.1| 80|Drosophila melanogaster CG5011-PA ... 31 0.68
AJ001164-1|CAA04568.1| 1668|Drosophila melanogaster Additional s... 30 0.90
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro... 28 4.8
AY047554-1|AAK77286.1| 1478|Drosophila melanogaster GH06265p pro... 28 4.8
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 28 4.8
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein. 28 4.8
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 28 4.8
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 28 4.8
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 28 4.8
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 28 4.8
AE013599-1820|AAF58298.2| 1843|Drosophila melanogaster CG30483-P... 28 4.8
AE014297-2353|AAF55419.1| 206|Drosophila melanogaster CG5866-PA... 27 8.4
>AE013599-1436|AAF58537.2| 832|Drosophila melanogaster CG13164-PA,
isoform A protein.
Length = 832
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 119 CHGLHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYSP 259
C L P+L P+L P+L P+L +L PNL+ P++ P++ P
Sbjct: 710 CKFLQEPNLQEPNLQEPNLQEPNLQDDTLQEPNLQEPNLQEPNLQEP 756
Score = 40.3 bits (90), Expect = 8e-04
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 128 LHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYSPV 262
L P+L P+L P+L +L P+L PNL+ P++ P++ +
Sbjct: 718 LQEPNLQEPNLQEPNLQDDTLQEPNLQEPNLQEPNLQEPNLQDAI 762
Score = 37.1 bits (82), Expect = 0.008
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 128 LHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYSP 259
L P+L P+L +L P+L P+L PNL+ P++ + P
Sbjct: 723 LQEPNLQEPNLQDDTLQEPNLQEPNLQEPNLQEPNLQDAILQEP 766
Score = 36.7 bits (81), Expect = 0.010
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 128 LHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYSP 259
L P+L +L P+L P+L P+L PNL+ + P++ P
Sbjct: 728 LQEPNLQDDTLQEPNLQEPNLQEPNLQEPNLQDAILQEPNLQEP 771
Score = 35.9 bits (79), Expect = 0.018
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 128 LHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYSP 259
L P+L P+L P+L P+L L PNL+ P++ ++ P
Sbjct: 738 LQEPNLQEPNLQEPNLQEPNLQDAILQEPNLQEPNLQDATLQEP 781
Score = 35.5 bits (78), Expect = 0.024
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 128 LHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSI 250
L P+L P+L P+L L P+L PNL+ ++ P++
Sbjct: 743 LQEPNLQEPNLQEPNLQDAILQEPNLQEPNLQDATLQEPNL 783
Score = 31.1 bits (67), Expect = 0.51
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 128 LHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSI 250
L +L P+L P+L P+L P+L L+ P++ P++
Sbjct: 733 LQDDTLQEPNLQEPNLQEPNLQEPNLQDAILQEPNLQEPNL 773
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 128 LHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSI 250
L P+L P+L +L P+L +L NL+ ++ P++
Sbjct: 763 LQEPNLQEPNLQDATLQEPNLQDATLQELNLQDATLQEPNL 803
>AE014134-231|AAF51393.1| 80|Drosophila melanogaster CG5011-PA
protein.
Length = 80
Score = 30.7 bits (66), Expect = 0.68
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +2
Query: 122 HGLHRPSLHRPSLHGPSLHCPSLH--RPSLHRPNLRSPSIHRP 244
H H P H P HGP H P H +P H P P H P
Sbjct: 7 HHHHNPPPHGPPPHGPPHHGPPHHEPQPPFHTP--VHPIYHEP 47
>AJ001164-1|CAA04568.1| 1668|Drosophila melanogaster Additional sex
combs protein.
Length = 1668
Score = 30.3 bits (65), Expect = 0.90
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 128 LHRPSLHRPSLHGPSLHCPS-LHRPSLHRPNLRSPSIHR 241
LHRP+ HRP L P H + + P+ RP P +HR
Sbjct: 679 LHRPAAHRPHLPPPQCHLRAPVAIPARRRPR---PQLHR 714
>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
protein.
Length = 1153
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 152 PSLHGPSLHCPSLHRPSLHRPNLRSPSIH 238
PS P LH P H LHRP+ PS+H
Sbjct: 238 PSHMHPHLH-PHAHLQGLHRPHDLPPSMH 265
>AY047554-1|AAK77286.1| 1478|Drosophila melanogaster GH06265p
protein.
Length = 1478
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 137 PSLHRPSLHGPSLHCPSLH 193
P LH LHGP CPS H
Sbjct: 57 PHLHTLQLHGPPSPCPSEH 75
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 152 PSLHGPSLHCPSLHRPSLHRPNLRSPSIH 238
PS P LH P H LHRP+ PS+H
Sbjct: 1070 PSHMHPHLH-PHAHLQGLHRPHDLPPSMH 1097
>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
Length = 1966
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 152 PSLHGPSLHCPSLHRPSLHRPNLRSPSIH 238
PS P LH P H LHRP+ PS+H
Sbjct: 1070 PSHMHPHLH-PHAHLQGLHRPHDLPPSMH 1097
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 152 PSLHGPSLHCPSLHRPSLHRPNLRSPSIH 238
PS P LH P H LHRP+ PS+H
Sbjct: 1070 PSHMHPHLH-PHAHLQGLHRPHDLPPSMH 1097
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 152 PSLHGPSLHCPSLHRPSLHRPNLRSPSIH 238
PS P LH P H LHRP+ PS+H
Sbjct: 1070 PSHMHPHLH-PHAHLQGLHRPHDLPPSMH 1097
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 152 PSLHGPSLHCPSLHRPSLHRPNLRSPSIH 238
PS P LH P H LHRP+ PS+H
Sbjct: 1070 PSHMHPHLH-PHAHLQGLHRPHDLPPSMH 1097
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 152 PSLHGPSLHCPSLHRPSLHRPNLRSPSIH 238
PS P LH P H LHRP+ PS+H
Sbjct: 1070 PSHMHPHLH-PHAHLQGLHRPHDLPPSMH 1097
>AE013599-1820|AAF58298.2| 1843|Drosophila melanogaster CG30483-PA
protein.
Length = 1843
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 137 PSLHRPSLHGPSLHCPSLH 193
P LH LHGP CPS H
Sbjct: 422 PHLHTLQLHGPPSPCPSEH 440
>AE014297-2353|AAF55419.1| 206|Drosophila melanogaster CG5866-PA
protein.
Length = 206
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 122 HGLHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYSPVYA 268
HG H H+ +H L P +H +IH P ++SP YA
Sbjct: 131 HGSH----HQHPIHHNHLEAPYHGTHGVHHHRNCHATIHCPRVHSPAYA 175
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,330,368
Number of Sequences: 53049
Number of extensions: 127956
Number of successful extensions: 580
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -