Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10544
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    29   0.040
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    28   0.092
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.49 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    24   1.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.5  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.5  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 29.1 bits (62), Expect = 0.040
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 7   EKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPAS 138
           +K  +G P P       PT  +       +SR   T+CS+VP +
Sbjct: 68  KKSPQGAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPTT 111


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 27.9 bits (59), Expect = 0.092
 Identities = 13/54 (24%), Positives = 28/54 (51%)
 Frame = +1

Query: 10  KGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGENE 171
           K D   P P    E +PT  +E+E   ++ +P++++ +  P +   P+   E++
Sbjct: 387 KSDEIPPEPVPTPEPQPTQTTESEPTQASEQPTESSTTQKPQTTKTPESGNESD 440


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = -3

Query: 331 YMFFKEWSANVLHQKDCFCIVKFFFTKLIFARTFREQCTSYFLLHHILF 185
           Y F+  +    +H     CI  FF   +IF       C   F   H+LF
Sbjct: 147 YYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLF 195


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 337 NPYMFFKEWSANVLHQKD 284
           NPY+F+  +S  +LH+ D
Sbjct: 119 NPYLFYYAFSVALLHRPD 136


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -3

Query: 385 LAELANRCSHMIWVERNPYMFFKEWSANVLHQKDCFCIVKFFFTKLIFARTFREQCTSYF 206
           L EL N   HM  +E N     + +S  +LHQK  F ++ FF        +     T+Y 
Sbjct: 324 LHELRNNYFHMD-LENN----VQSYSLQLLHQKVQFSVLGFFVVDYTLLYSIVGAVTTYL 378

Query: 205 LL 200
           ++
Sbjct: 379 VI 380


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 315 NGLQTYSTRKIVFAS*N 265
           NGLQ Y  R +VF+S N
Sbjct: 790 NGLQCYIDRNVVFSSQN 806


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 337 NPYMFFKEWSANVLHQKD 284
           NPY+F    S  +LH++D
Sbjct: 119 NPYLFSYALSVAILHRQD 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,931
Number of Sequences: 336
Number of extensions: 4391
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)