Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10544
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical p... 28 0.42
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 31 0.88
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 31 0.88
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 31 0.88
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 31 0.88
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 31 0.88
Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical pr... 30 1.5
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 30 1.5
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 30 1.5
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 30 1.5
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 30 2.0
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 30 2.0
L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein. 30 2.0
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 30 2.0
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 29 2.7
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 29 2.7
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 29 2.7
U00049-4|AAC47055.1| 332|Caenorhabditis elegans Serpentine rece... 29 2.7
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 29 2.7
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 29 2.7
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 29 2.7
AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen prot... 29 2.7
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 3.5
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 3.5
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 29 3.5
AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen prot... 29 3.5
Z47356-3|CAA87416.1| 268|Caenorhabditis elegans Hypothetical pr... 28 6.2
U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protei... 28 6.2
U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protei... 28 6.2
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 28 6.2
Z83102-3|CAB05466.1| 399|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical po... 28 8.2
Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein. 28 8.2
AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated... 28 8.2
>Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical
protein C39E9.9 protein.
Length = 276
Score = 27.9 bits (59), Expect(2) = 0.42
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 4 GEKGDRGHPGPPGI 45
GE G++G PGPPG+
Sbjct: 142 GEPGEQGPPGPPGV 155
Score = 23.0 bits (47), Expect(2) = 0.42
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 22 GHPGPPGICECKPTD-NSENERGD 90
GH GPPG+ E +P D + E G+
Sbjct: 161 GHDGPPGV-EGEPGDAGDQGEDGE 183
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 31.1 bits (67), Expect = 0.88
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPTDNSENERGD 90
GEKGD G PG PG+ D E+GD
Sbjct: 167 GEKGDGGMPGMPGLPGPSGRDGYPGEKGD 195
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK-TTCSNVPASDPKP 150
KG+KGD G PG PG+ +G+ R + + +P D KP
Sbjct: 419 KGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTPGQSIPGLPGKDGKP 469
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 31.1 bits (67), Expect = 0.88
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPTDNSENERGD 90
GEKGD G PG PG+ D E+GD
Sbjct: 167 GEKGDGGMPGMPGLPGPSGRDGYPGEKGD 195
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK-TTCSNVPASDPKP 150
KG+KGD G PG PG+ +G+ R + + +P D KP
Sbjct: 418 KGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTPGQSIPGLPGKDGKP 468
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 31.1 bits (67), Expect = 0.88
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPTDNSENERGD 90
GEKGD G PG PG+ D E+GD
Sbjct: 167 GEKGDGGMPGMPGLPGPSGRDGYPGEKGD 195
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK-TTCSNVPASDPKP 150
KG+KGD G PG PG+ +G+ R + + +P D KP
Sbjct: 418 KGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTPGQSIPGLPGKDGKP 468
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 31.1 bits (67), Expect = 0.88
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPTDNSENERGD 90
GEKGD G PG PG+ D E+GD
Sbjct: 167 GEKGDGGMPGMPGLPGPSGRDGYPGEKGD 195
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK-TTCSNVPASDPKP 150
KG+KGD G PG PG+ +G+ R + + +P D KP
Sbjct: 419 KGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTPGQSIPGLPGKDGKP 469
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 31.1 bits (67), Expect = 0.88
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPTDNSENERGD 90
GEKGD G PG PG+ D E+GD
Sbjct: 167 GEKGDGGMPGMPGLPGPSGRDGYPGEKGD 195
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK-TTCSNVPASDPKP 150
KG+KGD G PG PG+ +G+ R + + +P D KP
Sbjct: 455 KGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTPGQSIPGLPGKDGKP 505
>Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical
protein M199.5 protein.
Length = 660
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDNSENERGDSA--SRPSKTTCSNVPASDPKPQWMGEN 168
KG+KGD+G GP G T S+ ++G+ +P + D +P G++
Sbjct: 501 KGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQD 558
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 111
GEKG G G PG K D + ++G S + K
Sbjct: 121 GEKGKDGDKGAPGAKGSKGDDGKKGDKGSSGEKGEK 156
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 111
KGEKG G PG G K D + +GD + +K
Sbjct: 168 KGEKGSNGSPGSKGDKGEKGADGNPGPKGDKGADGAK 204
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 111
KG+KG++G GP G T ++ ++GD + +K
Sbjct: 297 KGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAK 333
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 111
KGEKGD G PG G K D ++G K
Sbjct: 596 KGEKGDIGQPGQKGDKGDKGQDGQPGQKGQDGQPGQK 632
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGE 165
KG+KG++G G PG K D ++ G S+ K + +D P G+
Sbjct: 180 KGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGS-DGAKGADGNPGSKGD 233
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 111
KGEKGD G PG G K D ++G K
Sbjct: 528 KGEKGDIGQPGQKGDKGEKGQDGQPGQKGQDGQPGQK 564
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform a protein.
Length = 335
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDN 69
+G G +G PG PG+C C+ D+
Sbjct: 272 EGPMGGQGPPGEPGVCVCQNVDS 294
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform b protein.
Length = 372
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDN 69
+G G +G PG PG+C C+ D+
Sbjct: 309 EGPMGGQGPPGEPGVCVCQNVDS 331
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDN 69
+G G +G PG PG+C C+ D+
Sbjct: 293 EGPMGGQGPPGEPGVCVCQNVDS 315
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 150
GE G G PGPPG ++ E G +R + PA P P
Sbjct: 134 GEAGGAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGP 182
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 150
GE G G PGPPG ++ E G +R + PA P P
Sbjct: 134 GEAGGAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGP 182
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/50 (26%), Positives = 19/50 (38%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQ 153
G G++G G PG C C+ T+ N+ P +PQ
Sbjct: 289 GPTGEQGPSGTPGTCVCQDTEVVMNDEKGRVPAPRDNVAPGATGGSYEPQ 338
>L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein.
Length = 360
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/50 (26%), Positives = 19/50 (38%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQ 153
G G++G G PG C C+ T+ N+ P +PQ
Sbjct: 289 GPTGEQGPSGTPGTCVCQDTEVVMNDEKGRVPAPRDNVAPGATGGSYEPQ 338
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPTDNSENERGDSASRPS-KTTCSNVPASDPKP 150
G KG+ G PG GI + E+GD+A + S+ AS P P
Sbjct: 213 GPKGETGSPGRDGIPGARGPPGERGEKGDTAFLSTYPRVASSSTASSPGP 262
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 4 GEKGDRGHPGPPGI 45
GE+GDRG GPPG+
Sbjct: 449 GERGDRGDIGPPGL 462
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 1 KGEKGDRGHPGPPG 42
KGEKG+RG PG PG
Sbjct: 860 KGEKGERGAPGAPG 873
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 1 KGEKGDRGHPGPPG 42
KGEKG+RG PG PG
Sbjct: 463 KGEKGERGAPGAPG 476
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 1 KGEKGDRGHPGPPG 42
KGEKG+RG PG PG
Sbjct: 823 KGEKGERGAPGAPG 836
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 1 KGEKGDRGHPGPPG 42
KGEKG+RG PG PG
Sbjct: 335 KGEKGERGAPGAPG 348
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 1 KGEKGDRGHPGPPG 42
KGEKG+RG PG PG
Sbjct: 860 KGEKGERGAPGAPG 873
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 1 KGEKGDRGHPGPPG 42
KGEKG+RG PG PG
Sbjct: 463 KGEKGERGAPGAPG 476
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 1 KGEKGDRGHPGPPG 42
KGEKG+RG PG PG
Sbjct: 823 KGEKGERGAPGAPG 836
>U00049-4|AAC47055.1| 332|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 3 protein.
Length = 332
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 367 RCSHMIWVERNPYMFFKEWSANVLHQKDCFCIVKFFFTKLIFARTF 230
R ++IWV + F++ S L+ DCF V +LIF R+F
Sbjct: 35 RILYVIWVSQRH--FYRNQSFYNLYSVDCFTSVLAMSNELIFTRSF 78
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 1 KGEKGDRGHPGPPG 42
KGEKG+RG PG PG
Sbjct: 335 KGEKGERGAPGAPG 348
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 1 KGEKGDRGHPGPPG 42
KGEKG+RG PG PG
Sbjct: 463 KGEKGERGAPGAPG 476
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 1 KGEKGDRGHPGPPG 42
KGEKG+RG PG PG
Sbjct: 802 KGEKGERGAPGAPG 815
>AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen protein
54 protein.
Length = 281
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPTDNSENERGDS-ASRPSKTTCSNVPASDPKPQ 153
GE G G PG PG + G S K C PA +P PQ
Sbjct: 90 GEAGPPGAPGTPGADGEAGNPGKDGAAGSSLVFEDEKLPCIKCPAGEPGPQ 140
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +1
Query: 7 EKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQ 153
+ GD G P PP K G TT N + DPKP+
Sbjct: 59 QAGDSGKPNPPAGDPTKLKPGGGGPAGKPGPNAGDTTKPNSQSGDPKPR 107
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGENELE 177
+GE G+ G PG PG E E+G P + + D +P GEN L+
Sbjct: 879 EGECGEDGFPGSPGQPGYPGQQGREGEKG-YPGIPGENGLPGLRGQDGQPGLKGENGLD 936
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGENELE 177
+GE G+ G PG PG E E+G P + + D +P GEN L+
Sbjct: 1136 EGECGEDGFPGSPGQPGYPGQQGREGEKG-YPGIPGENGLPGLRGQDGQPGLKGENGLD 1193
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGENELE 177
+GE G+ G PG PG E E+G P + + D +P GEN L+
Sbjct: 1135 EGECGEDGFPGSPGQPGYPGQQGREGEKG-YPGIPGENGLPGLRGQDGQPGLKGENGLD 1192
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPT--DNSENERGDSASRPSKTTCSNVPASDPKP 150
G GD+G GPPG PT E+GD A RP C P +P
Sbjct: 156 GPAGDQGRHGPPG-----PTGGQGGPGEQGD-AGRPGAAGCPGPPGPRGEP 200
>AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen protein
49 protein.
Length = 283
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPTDNSENERGDSA--SRPSKTTCSNVPASDPKP 150
GEKG G+PG PG D GD P+ C PA P P
Sbjct: 101 GEKGSLGNPGQPG---PDGVDGDNGVDGDVVIHDMPNPKECIKCPAGPPGP 148
>Z47356-3|CAA87416.1| 268|Caenorhabditis elegans Hypothetical
protein T15H9.3 protein.
Length = 268
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 35 PLEFASVNQQIIQRMKEEIRQVDLRKQPVAMCRPQIQ 145
PL+ A + QI +++ +I Q+ + QP + Q+Q
Sbjct: 85 PLQLAPIPTQIQSQLQPQISQIPIHNQPQIQIQSQVQ 121
>U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protein
164 protein.
Length = 396
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 1 KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDP 144
KGE G G PG G D ++ +AS+ + C+ PA P
Sbjct: 109 KGESGSAGEPGTDGTDGTPGKDGADGSNEQTASQ-AGDLCTACPAGPP 155
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPTDNSENE 81
G +GD GHPGP G K T ++ +
Sbjct: 189 GPEGDHGHPGPMGPAGEKGTSGADGK 214
>U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protein
75 protein.
Length = 285
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 1 KGEKGDRGHPGPPG 42
+G GDRG PGPPG
Sbjct: 237 EGAYGDRGEPGPPG 250
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 4 GEKGDRGHPGPPGIC-ECKPTDNSENERGDSASRPSKTTCSNVPASDP 144
G +G +G PG PG C C+ + +E A P + P S P
Sbjct: 257 GPQGPKGEPGNPGTCHHCQNRAPAPSEAPGKAPPPPQDYTRPAPESYP 304
>Z83102-3|CAB05466.1| 399|Caenorhabditis elegans Hypothetical
protein C54C8.4 protein.
Length = 399
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 243 KINFVKKNFTMQKQSFWWSTFADHSLKNMYGL 338
K+N+ + + + SFWW + H K+ Y L
Sbjct: 363 KVNYFYRLYKVITNSFWWYIYQSHVWKSDYPL 394
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = +1
Query: 1 KGEKGDRGHPGP---PGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 150
+G G GHPG PGI DN R A P C PA P P
Sbjct: 106 RGPPGPPGHPGQRGIPGIPGRNGQDNYNTIRA-PACPPRNQDCIKCPAGPPGP 157
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 4 GEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 150
G KG G PG PG+ N N + ++ ++ C P + P P
Sbjct: 96 GPKGPDGGPGQPGLIGLNGR-NGRNGKYVASEAHNEPACQKCPVAPPGP 143
>Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical
polypeptide I protein.
Length = 854
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 61 TDNSENERGDSASRPSKTTCSNVPASDPKPQWM-GENELESFKIE 192
T + ++R + A PS SN S P P+W G +++ IE
Sbjct: 138 TSPAPSKRENPADAPSDRVVSNAKLSQPGPEWFEGFEQMDMTDIE 182
>Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein.
Length = 854
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 61 TDNSENERGDSASRPSKTTCSNVPASDPKPQWM-GENELESFKIE 192
T + ++R + A PS SN S P P+W G +++ IE
Sbjct: 138 TSPAPSKRENPADAPSDRVVSNAKLSQPGPEWFEGFEQMDMTDIE 182
>AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated
protein 33 protein.
Length = 854
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 61 TDNSENERGDSASRPSKTTCSNVPASDPKPQWM-GENELESFKIE 192
T + ++R + A PS SN S P P+W G +++ IE
Sbjct: 138 TSPAPSKRENPADAPSDRVVSNAKLSQPGPEWFEGFEQMDMTDIE 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,503,604
Number of Sequences: 27780
Number of extensions: 413480
Number of successful extensions: 2518
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2443
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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