Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10543
(714 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 144 3e-33
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 132 1e-29
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 126 4e-28
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 120 5e-26
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 109 7e-23
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 104 2e-21
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 103 6e-21
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 102 1e-20
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 101 2e-20
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 93 6e-18
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 89 8e-17
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 87 3e-16
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 86 9e-16
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 81 4e-14
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 75 2e-12
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 73 9e-12
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 72 2e-11
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 70 5e-11
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 53 8e-06
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 51 3e-05
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 48 3e-04
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 47 4e-04
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 46 0.001
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 43 0.009
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 42 0.011
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 41 0.035
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 40 0.061
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 39 0.14
UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.19
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 37 0.43
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 37 0.57
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 36 0.99
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 35 2.3
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 34 4.0
UniRef50_UPI00015B58EF Cluster: PREDICTED: similar to Chm protei... 33 5.3
UniRef50_Q2SMA8 Cluster: Membrane-bound metallopeptidase; n=1; H... 33 5.3
UniRef50_Q9VX38 Cluster: CG8326-PA; n=3; Sophophora|Rep: CG8326-... 33 7.0
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 9.2
UniRef50_Q4P582 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides im... 33 9.2
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 144 bits (348), Expect = 3e-33
Identities = 65/88 (73%), Positives = 77/88 (87%)
Frame = +3
Query: 240 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 419
F + +L+AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCI
Sbjct: 84 FRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCI 143
Query: 420 GFTNKDSLSQRKTCYAQHTQVRAIRKKM 503
GFT KDS+SQRKTCYAQH+Q++ IR KM
Sbjct: 144 GFTIKDSMSQRKTCYAQHSQIKNIRAKM 171
Score = 126 bits (303), Expect = 7e-28
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = +1
Query: 52 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 231
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80
Query: 232 ERSFRKF 252
ERSFRKF
Sbjct: 81 ERSFRKF 87
Score = 103 bits (248), Expect = 3e-21
Identities = 46/67 (68%), Positives = 58/67 (86%)
Frame = +2
Query: 509 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 688
II R++T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKVLK+PRF++S LME
Sbjct: 174 IIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLME 233
Query: 689 LHGESGG 709
LHG+ GG
Sbjct: 234 LHGDGGG 240
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 132 bits (318), Expect = 1e-29
Identities = 61/90 (67%), Positives = 72/90 (80%)
Frame = +3
Query: 240 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 419
F + +LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 420 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 509
GFT K + RKT YAQH QVR IRKKM E
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 1e-21
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +1
Query: 52 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 231
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 232 ERSFR 246
R F+
Sbjct: 81 FRKFK 85
Score = 104 bits (250), Expect = 2e-21
Identities = 47/70 (67%), Positives = 60/70 (85%)
Frame = +2
Query: 491 QKENV*IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 670
+K+ + I+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 671 ISKLMELHGE 700
+ KLMELHGE
Sbjct: 225 LGKLMELHGE 234
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 126 bits (305), Expect = 4e-28
Identities = 59/92 (64%), Positives = 72/92 (78%)
Frame = +3
Query: 234 KVFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 413
+ + +I+L AE VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+F
Sbjct: 474 QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLF 533
Query: 414 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 509
CI FT K +KTCYAQ +Q+R IR+KM E
Sbjct: 534 CIAFTKKRVNQNKKTCYAQSSQIRQIRRKMRE 565
Score = 100 bits (240), Expect = 3e-20
Identities = 47/64 (73%), Positives = 55/64 (85%)
Frame = +1
Query: 58 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 237
DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D +
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADED--Q 474
Query: 238 SFRK 249
++RK
Sbjct: 475 AYRK 478
Score = 81.0 bits (191), Expect = 3e-14
Identities = 35/64 (54%), Positives = 51/64 (79%)
Frame = +2
Query: 509 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 688
I+T T+ +L+E+V K IP+SI ++IEKA IYPL++V IRKVK+LK P+F++ KLME
Sbjct: 566 IMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLME 625
Query: 689 LHGE 700
+HG+
Sbjct: 626 VHGD 629
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 120 bits (288), Expect = 5e-26
Identities = 58/97 (59%), Positives = 74/97 (76%)
Frame = +3
Query: 234 KVFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 413
+VF +I+L AE V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF
Sbjct: 78 QVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVF 137
Query: 414 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLHAT 524
I FT K ++KT YA+ ++V+AIRKKM + L T
Sbjct: 138 AICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTET 174
Score = 83.8 bits (198), Expect = 4e-15
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 4/69 (5%)
Frame = +1
Query: 55 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 222
VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMK-- 73
Query: 223 TDAERSFRK 249
D + FRK
Sbjct: 74 DDESQVFRK 82
Score = 42.3 bits (95), Expect = 0.011
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 14/85 (16%)
Frame = +2
Query: 491 QKENV*IITRDVTNSELREVVNKLIPDSI--------------AKDIEKACHGIYPLRDV 628
+K+ V I+T V++++L+ VV+ LI S+ A+ I I+P+ +V
Sbjct: 164 RKKMVDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPIHNV 223
Query: 629 CIRKVKVLKRPRFEISKLMELHGES 703
IRKVKVLK P+ + +KL EL+ S
Sbjct: 224 FIRKVKVLKTPKVDAAKLSELYASS 248
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 109 bits (262), Expect = 7e-23
Identities = 51/98 (52%), Positives = 70/98 (71%)
Frame = +3
Query: 240 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 419
F +I+L + VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I
Sbjct: 81 FRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAI 140
Query: 420 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLHATSLT 533
T + +KT YA +Q+RAIR+KM E + + T
Sbjct: 141 AVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREAST 178
Score = 87.0 bits (206), Expect = 4e-16
Identities = 41/64 (64%), Positives = 49/64 (76%)
Frame = +1
Query: 58 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 237
DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED--H 79
Query: 238 SFRK 249
+FRK
Sbjct: 80 AFRK 83
Score = 79.0 bits (186), Expect = 1e-13
Identities = 35/65 (53%), Positives = 51/65 (78%)
Frame = +2
Query: 509 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 688
II R+ + L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+P+F++ L+
Sbjct: 171 IIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFDLGGLLA 230
Query: 689 LHGES 703
LHGES
Sbjct: 231 LHGES 235
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 104 bits (249), Expect = 2e-21
Identities = 46/70 (65%), Positives = 60/70 (85%)
Frame = +2
Query: 491 QKENV*IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 670
+K+ + I+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+FE
Sbjct: 112 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKFE 171
Query: 671 ISKLMELHGE 700
+ KLMELHGE
Sbjct: 172 LGKLMELHGE 181
Score = 91.1 bits (216), Expect = 2e-17
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +1
Query: 52 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 231
+VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+ GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQNDEVA 77
Query: 232 ERSFR 246
R F+
Sbjct: 78 FRKFK 82
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +3
Query: 240 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 392
F + +LI E VQG+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 78 FRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 103 bits (246), Expect = 6e-21
Identities = 46/93 (49%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Frame = +3
Query: 234 KVFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 413
K + +++L+ + V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF
Sbjct: 82 KAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVF 141
Query: 414 CIGFTNKDSL---SQRKTCYAQHTQVRAIRKKM 503
+ FT K S S TCYA+ +QVRAIR+K+
Sbjct: 142 TLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKI 174
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/65 (49%), Positives = 47/65 (72%)
Frame = +1
Query: 55 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 234
+DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGRV E +LADL+ D +
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DNSND 81
Query: 235 RSFRK 249
+++RK
Sbjct: 82 KAWRK 86
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +2
Query: 512 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMEL 691
IT + + E LI + K IEK I+PL+++ IRKVKVLKRP+ + +K+ EL
Sbjct: 178 ITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRPKLDATKIAEL 237
Query: 692 HGESGGG 712
+ G
Sbjct: 238 YSHEKKG 244
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 102 bits (244), Expect = 1e-20
Identities = 46/80 (57%), Positives = 62/80 (77%)
Frame = +3
Query: 264 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 443
E V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S
Sbjct: 91 EDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSN 150
Query: 444 SQRKTCYAQHTQVRAIRKKM 503
+KT YA+ Q++ IRK M
Sbjct: 151 QIKKTSYAKSAQIKKIRKIM 170
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +1
Query: 52 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 213
I +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV EV+LADL
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADL 75
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 101 bits (241), Expect = 2e-20
Identities = 49/91 (53%), Positives = 63/91 (69%)
Frame = +3
Query: 237 VFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 416
+F + +L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F
Sbjct: 6 IFRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFV 65
Query: 417 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 509
I FT K Q+ YAQ T+++ +R ++ E
Sbjct: 66 IAFTKKQE-DQKSHAYAQTTRIKKLRAEIVE 95
Score = 69.3 bits (162), Expect = 9e-11
Identities = 30/68 (44%), Positives = 45/68 (66%)
Frame = +2
Query: 497 ENV*IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEIS 676
E V ++ R+V +L+ VV KLIPDSI +D I+PL +RKVKVLK+P+ ++
Sbjct: 92 EIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKPKLDLG 151
Query: 677 KLMELHGE 700
+++ELH E
Sbjct: 152 RILELHSE 159
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 93.1 bits (221), Expect = 6e-18
Identities = 43/64 (67%), Positives = 52/64 (81%)
Frame = +1
Query: 55 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 234
VD ++KDWYD+KAP+MF+ R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D A
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQNDEVAF 81
Query: 235 RSFR 246
R F+
Sbjct: 82 RKFK 85
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 89.4 bits (212), Expect = 8e-17
Identities = 40/88 (45%), Positives = 60/88 (68%)
Frame = +3
Query: 246 QIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 425
+++LI + V+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I F
Sbjct: 82 KVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAF 141
Query: 426 TNKDSLSQRKTCYAQHTQVRAIRKKMCE 509
T QRKT YAQ +Q++ IRKK+ E
Sbjct: 142 TKSIKNQQRKTTYAQRSQIKDIRKKIVE 169
Score = 66.5 bits (155), Expect = 6e-10
Identities = 29/65 (44%), Positives = 45/65 (69%)
Frame = +1
Query: 55 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 234
+DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLADLQ +D +
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD-Q 77
Query: 235 RSFRK 249
++RK
Sbjct: 78 MAWRK 82
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/71 (33%), Positives = 48/71 (67%)
Frame = +2
Query: 491 QKENV*IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 670
+K+ V I+ ++V+ + +++ +S+AK+I KA I+PL+++ +RKVK++KRP+ +
Sbjct: 164 RKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRPKVD 223
Query: 671 ISKLMELHGES 703
KL E + +S
Sbjct: 224 AQKLREFYDDS 234
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 87.4 bits (207), Expect = 3e-16
Identities = 38/50 (76%), Positives = 44/50 (88%)
Frame = +2
Query: 554 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGES 703
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHG+S
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGDS 50
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 85.8 bits (203), Expect = 9e-16
Identities = 33/94 (35%), Positives = 61/94 (64%)
Frame = +3
Query: 234 KVFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 413
+ + +++ + VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F
Sbjct: 82 EAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLF 141
Query: 414 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCESL 515
+ FT + Q + CYA+ V+ +R ++ + +
Sbjct: 142 VVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMI 175
Score = 76.6 bits (180), Expect = 6e-13
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +1
Query: 58 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 237
+ RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL E
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 238 SFRK 249
++RK
Sbjct: 83 AYRK 86
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/63 (31%), Positives = 41/63 (65%)
Frame = +2
Query: 509 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 688
+I R ++ +++E V+ L + ++ + + C+ I PLR++ IRKV+V++ P+F+ L+
Sbjct: 174 MIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLS 233
Query: 689 LHG 697
HG
Sbjct: 234 AHG 236
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 80.6 bits (190), Expect = 4e-14
Identities = 32/58 (55%), Positives = 47/58 (81%)
Frame = +2
Query: 521 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 694
D ++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+L++P+ ++ KL ELH
Sbjct: 158 DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDLGKLPELH 215
Score = 69.3 bits (162), Expect = 9e-11
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +3
Query: 237 VFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 416
V + +LI E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC
Sbjct: 65 VVRKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFC 123
Query: 417 IGF-TNKDSLSQRKTCYAQHTQVRAI 491
+G+ TN + R+ AQ+ QV I
Sbjct: 124 VGYTTNVTTRYARQLVCAQYQQVHQI 149
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +1
Query: 70 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFR 246
+KD YDVKA +MF+ R +G T V R Q TK+ S GL G VFE SLA LQ D R F+
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQNDKVVVRKFK 70
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/78 (44%), Positives = 49/78 (62%)
Frame = +3
Query: 270 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 449
++G + F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G T +
Sbjct: 43 IKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYV 102
Query: 450 RKTCYAQHTQVRAIRKKM 503
+KTCY +H+ + IRK M
Sbjct: 103 KKTCYVKHSDEKKIRKIM 120
Score = 41.5 bits (93), Expect = 0.020
Identities = 15/49 (30%), Positives = 34/49 (69%)
Frame = +2
Query: 509 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 655
+I +++ ++++++ KL +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 123 VIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 72.5 bits (170), Expect = 9e-12
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +3
Query: 276 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 455
G V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K + S +
Sbjct: 89 GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKN 148
Query: 456 TCYAQHTQVRAIRKKMCESL 515
YA + R +R M ++L
Sbjct: 149 HTYANSHKARQVRDVMIKAL 168
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/95 (38%), Positives = 58/95 (61%)
Frame = +3
Query: 234 KVFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 413
K + Q QL+++ G+ L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF
Sbjct: 83 KFYLQTQLVSD---GK-CLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVF 138
Query: 414 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLH 518
I FT++ +RK C+ + +R +R + E+LH
Sbjct: 139 VIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLH 173
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/77 (35%), Positives = 42/77 (54%)
Frame = +1
Query: 58 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 237
DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L DL +
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLN 79
Query: 238 SFRKFS*SPNMCKDVMC 288
KF + D C
Sbjct: 80 GNTKFYLQTQLVSDGKC 96
Score = 34.7 bits (76), Expect = 2.3
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 548 VVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 694
+V KL + + +A I RDV IR+VKV+KRPR + L +H
Sbjct: 184 LVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKRPRNTMELLSTMH 232
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/71 (42%), Positives = 46/71 (64%)
Frame = +3
Query: 297 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 476
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSS 155
Query: 477 QVRAIRKKMCE 509
Q RA+R+++ +
Sbjct: 156 QKRALRRRITD 166
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = +2
Query: 509 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 655
II ++ N ++++ ++++ I + IE C I+P+ V IRK+KV++
Sbjct: 167 IIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 52.8 bits (121), Expect = 8e-06
Identities = 32/94 (34%), Positives = 53/94 (56%)
Frame = +3
Query: 270 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 449
V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ +G T +
Sbjct: 82 VEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIGTA 141
Query: 450 RKTCYAQHTQVRAIRKKMCESLHATSLTLNSGRW 551
+K+ A+RKKM E+L + L+SG++
Sbjct: 142 QKS---------AMRKKMIETLVKKAAELDSGQF 166
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 50.8 bits (116), Expect = 3e-05
Identities = 28/76 (36%), Positives = 46/76 (60%)
Frame = -1
Query: 228 VSVSL*ISQGNFENSSLQSFRSNFRSLGTVDKRGADLPLAEHRRSLDIVPIFASEWVDNL 49
+ + L ISQGN ++S L+ FR + S + +K A++ AE RR L+++P+ S+ V L
Sbjct: 76 ILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDRRRLNVIPVLLSKRVGCL 135
Query: 48 LLNTFFTALRQAFIFP 1
LL++ F L +FP
Sbjct: 136 LLSSLF-PLGNPLVFP 150
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/70 (37%), Positives = 43/70 (61%)
Frame = +3
Query: 303 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 482
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K + S + + V
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQMQA-IREMMV 142
Query: 483 RAIRKKMCES 512
++K+ E+
Sbjct: 143 DIVKKRASET 152
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 47.2 bits (107), Expect = 4e-04
Identities = 18/28 (64%), Positives = 26/28 (92%)
Frame = +2
Query: 620 RDVCIRKVKVLKRPRFEISKLMELHGES 703
R +C++KVK+LK+P+FE+ KLMELHG+S
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHGDS 90
Score = 41.5 bits (93), Expect = 0.020
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +1
Query: 52 IVDPFTRKDWYDVKAPSMFSKRQVGTT 132
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +3
Query: 270 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 449
VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S
Sbjct: 77 VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSS 136
Query: 450 RKT 458
KT
Sbjct: 137 IKT 139
Score = 32.7 bits (71), Expect = 9.2
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 545 EVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 685
E V +I D +++ K IYP+R + IRK +VL P +I +L+
Sbjct: 160 EYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEEKIVELV 206
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 42.7 bits (96), Expect = 0.009
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +3
Query: 309 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 488
+LT D LR +V++ + +EA+I V TTD Y +RV + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKA 133
Query: 489 IRKKMCESLHATS 527
IR+ M + +HA +
Sbjct: 134 IRRVMIDKVHAAA 146
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 42.3 bits (95), Expect = 0.011
Identities = 29/78 (37%), Positives = 41/78 (52%)
Frame = +3
Query: 270 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 449
V+G F G L D +R +V++ + I+ IDV T DGY +RV + FT
Sbjct: 66 VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT------- 118
Query: 450 RKTCYAQHTQVRAIRKKM 503
T A+ +Q RAIRK+M
Sbjct: 119 --TRRAKTSQQRAIRKEM 134
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 40.7 bits (91), Expect = 0.035
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +3
Query: 264 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 434
E + G + +F G +LT D +R +VK+ + I+AN+ V T DG+ +RV I T K
Sbjct: 70 EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK 126
Score = 37.5 bits (83), Expect = 0.32
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +1
Query: 55 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 222
VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ D
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGD 57
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 39.9 bits (89), Expect = 0.061
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +3
Query: 147 PGNE--NCFGRIEGKSFRSFPG*STS*H*RGKVFPQIQLIAEYVQGRNVLCNFHGMDLTT 320
P N+ N GRI S R T+ H K ++ + V G N F G D T
Sbjct: 42 PANDPANLIGRISEISLRDL----TNEH--SKHMTRMYFKVDGVSGNNATSQFVGHDTTR 95
Query: 321 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 458
+ L+ V++ ++ I A ++V+T DG+ +RV + T + KT
Sbjct: 96 EYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 38.7 bits (86), Expect = 0.14
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 270 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLS 446
V G N F +LT + L + ++ + IE +DV T DGY LRV + FT + S
Sbjct: 76 VAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVRRCKTS 135
Query: 447 QRKTCYAQHTQV 482
Q++ A Q+
Sbjct: 136 QKRAIRAIMRQI 147
>UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1;
Desulfovibrio desulfuricans G20|Rep: Putative
uncharacterized protein - Desulfovibrio desulfuricans
(strain G20)
Length = 351
Score = 38.3 bits (85), Expect = 0.19
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -3
Query: 562 QLVHHLPEFRVSDVACNDSHIFFLIALT*VCWA*HVLRWLKESLLVKPMQKT 407
+L+H + S AC D + FF+ LT + A H +RWL+E+ ++ +Q T
Sbjct: 117 RLLHRWRNGKASVTACLDDYAFFIAGLTALYEATHEVRWLREAAALQQVQDT 168
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 37.1 bits (82), Expect = 0.43
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +3
Query: 270 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 449
V+G F G +L D +R + ++ + + +V T DGY LRV + FT + +
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQRCKTS 129
Query: 450 RKTCYAQHTQVRAIRKKMCES 512
+K+ + Q + +K ES
Sbjct: 130 QKSAIRKVMQ-EIVEQKARES 149
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 36.7 bits (81), Expect = 0.57
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 273 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 428
+G + F G +L+ D +R +V++ + I +D+ T DG+ LRV + T
Sbjct: 79 EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT 130
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 35.9 bits (79), Expect = 0.99
Identities = 28/94 (29%), Positives = 50/94 (53%)
Frame = +3
Query: 153 NENCFGRIEGKSFRSFPG*STS*H*RGKVFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLR 332
+E+ GRI + + F G T H V + + ++E V G++ L F G T+ +R
Sbjct: 51 DEHIIGRIYEMTQQEFNGDFTKMH----VMLRFR-VSETV-GQDALTTFVGHHHQTNHIR 104
Query: 333 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 434
+++++ I+ IDV T DGY++R+ + T K
Sbjct: 105 RQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 34.7 bits (76), Expect = 2.3
Identities = 23/73 (31%), Positives = 39/73 (53%)
Frame = +3
Query: 309 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 488
+LT D LR +V++ + +EA I V TTD Y +++ + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKA 133
Query: 489 IRKKMCESLHATS 527
IR+ M + + T+
Sbjct: 134 IRRTMIDLVRETA 146
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.9 bits (74), Expect = 4.0
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +3
Query: 234 KVFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 413
K++ QI ++E + F + + + LR +V++ + + +DVKT+DGYV R+
Sbjct: 65 KIYFQIDKVSE----ESATSIFKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLK 120
Query: 414 CIGFTNKDSLSQRK 455
+ T + + +K
Sbjct: 121 VLALTYRHLNTSKK 134
>UniRef50_UPI00015B58EF Cluster: PREDICTED: similar to Chm protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to Chm
protein - Nasonia vitripennis
Length = 593
Score = 33.5 bits (73), Expect = 5.3
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +3
Query: 330 RWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC- 506
R +++ + +E D DGY + F + + N +L+ Y A K C
Sbjct: 218 RMLMQLLTSCLEQGADSPEFDGYRDKTF-VEYLNTKNLTPIVKHYVMQAIAMATDKTSCR 276
Query: 507 ESLHATSLTLNS-GRW*TS*FLTPLPRTSRRPAMASTLCAMF 629
+ ++ T LNS GR+ + FL P+ + P LCA+F
Sbjct: 277 DGVNRTKHFLNSLGRYGNTPFLWPMYGSGELPQCFCRLCAVF 318
>UniRef50_Q2SMA8 Cluster: Membrane-bound metallopeptidase; n=1;
Hahella chejuensis KCTC 2396|Rep: Membrane-bound
metallopeptidase - Hahella chejuensis (strain KCTC 2396)
Length = 386
Score = 33.5 bits (73), Expect = 5.3
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Frame = +2
Query: 437 LLEPTQDVLRPAHSGQSNQKENV*IITRDVTNSELREVVNKLIP--------DSIAKDIE 592
LLE + R + +S +KE +T+ NS L N+L +++ K++E
Sbjct: 187 LLESRNTLARSKETLESQRKEREATLTK--LNSSLNYKQNELTRMQKNQKQLETLVKEVE 244
Query: 593 KACHGIYPLRD-VCIRKVKVLKRPRFEISKLMELHGESGGG 712
KA + +D V K++ K P+ L +LHG+SGGG
Sbjct: 245 KAISNLELTQDSVPFSKLRA-KLPKPTKGALQQLHGQSGGG 284
>UniRef50_Q9VX38 Cluster: CG8326-PA; n=3; Sophophora|Rep: CG8326-PA
- Drosophila melanogaster (Fruit fly)
Length = 332
Score = 33.1 bits (72), Expect = 7.0
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = +2
Query: 464 RPAHSGQSNQKENV*IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 643
+P S S + N+ + LR V N++ S+ + +A +G+ +R+ ++
Sbjct: 83 KPGSSSSSKETRNIKQFANETDEDYLRRV-NRMTNASVREAHYEAKYGVNVIRNPKTGEI 141
Query: 644 KVLKRPRFEISKLME 688
V KRP+ EI +L++
Sbjct: 142 TVQKRPKNEIDELLK 156
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 9.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 307 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 432
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_Q4P582 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 606
Score = 32.7 bits (71), Expect = 9.2
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -2
Query: 713 CLHRFRREVPSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQ 576
C R R P+T R S + P CKHR+ + P PW+
Sbjct: 248 CALRPRCFAPATDEPRLNGSHSPPPKSCKHRSSSKSASGPDDIPWR 293
>UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 363
Score = 32.7 bits (71), Expect = 9.2
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 536 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 688
EL V + +P + AK + CH Y L D ++ +K RFE L+E
Sbjct: 60 ELLWEVTRHLPPASAKMLAYTCHKFYHLSDTWLKNIKFFPVERFETLCLLE 110
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,804,629
Number of Sequences: 1657284
Number of extensions: 15334634
Number of successful extensions: 44537
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 42751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44529
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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