Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10542X
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    26   0.26 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.5  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   7.5  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   7.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.9  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   9.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -3

Query: 150 KPVEFDEVIEEKKHKRIEVKEKIDRPVLPKIVIDNSENVEQ 28
           K +  DE  EEKK +  E K+K D+P +  +  D  E+ ++
Sbjct: 221 KELSDDEAEEEKKEEEGEDKDK-DKPKIEDVGEDEDEDTKK 260


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 82  NFLFNFYSFMFLLFNNFIKFNRFY 153
           N ++ F +F+F+L    I   +FY
Sbjct: 229 NSIYGFQNFLFVLSTFSICITQFY 252


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 561 FNHRMFNINYENKTKYTDKIN 499
           FN   FN NY+    Y++  N
Sbjct: 206 FNDPQFNFNYQYNQAYSNYNN 226


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 561 FNHRMFNINYENKTKYTDKIN 499
           FN   FN NY+    Y++  N
Sbjct: 226 FNDPQFNFNYQYNQAYSNYNN 246


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 208 CQIAVVLLEKFLVPNSAPGKTC 143
           C   VVL +KF V N    + C
Sbjct: 185 CAFVVVLKQKFCVVNQYIKQVC 206


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 208 CQIAVVLLEKFLVPNSAPGKTC 143
           C   VVL +KF V N    + C
Sbjct: 10  CAFVVVLKQKFCVVNQYIKQVC 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,378
Number of Sequences: 336
Number of extensions: 2876
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)