Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10542X
         (575 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   109   1e-24
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    43   1e-04
Z68114-4|CAA92159.1|  324|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AF003141-12|AAP68910.1|  946|Caenorhabditis elegans Hypothetical...    27   7.2  
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical...    27   7.2  

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  109 bits (263), Expect = 1e-24
 Identities = 50/81 (61%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
 Frame = +1

Query: 256 VVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAKKEIGL 435
           VV MVW+GL+VVK GR MLGATNP  S PGTIRGD CIQ GRNI HGSD+V+SA +EI  
Sbjct: 73  VVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVDSANREIAH 132

Query: 436 WFTDKEVVGW-TPANENWAYE 495
           WF  +E+  + +P   +W YE
Sbjct: 133 WFKQEEINDYASPFINSWVYE 153



 Score = 40.7 bits (91), Expect = 7e-04
 Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
 Frame = +2

Query: 182 LQQHYSDLASRPFFPGLVKYMSSG--LWSLWYG 274
           L+ HY DL  +PFFP L++YMSSG  +  +W G
Sbjct: 48  LEVHYQDLKDKPFFPSLIEYMSSGPVVAMVWQG 80


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 26/64 (40%), Positives = 35/64 (54%)
 Frame = +1

Query: 256 VVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAKKEIGL 435
           VV M+WEG +VVK  R +LG       +  +I  DL ++      H SDSV SA +E  L
Sbjct: 48  VVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGCHCSDSVASANREYVL 106

Query: 436 WFTD 447
           WF +
Sbjct: 107 WFEE 110



 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 164 IRHEELLQQHYSDLASRPFFPGLVKYMSSG--LWSLWYG 274
           ++ +E +   + D   +PFFP L+ YMSSG  +  LW G
Sbjct: 20  VKEDEKMNSMHKD---KPFFPLLIDYMSSGPVVAMLWEG 55


>Z68114-4|CAA92159.1|  324|Caenorhabditis elegans Hypothetical
           protein F17A2.6 protein.
          Length = 324

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +2

Query: 77  RSIFSLTSILLCFFSSITSSNSTGFTWCRIRHEELLQQHYSDLASRPFFPGL 232
           + +   T + LCF+  I+S     + +C + HEE+L Q Y  +   P FP L
Sbjct: 238 KGVILQTFLPLCFYCPISSI----YFYCIVTHEEILFQQYF-MFLIPAFPAL 284


>AF003141-12|AAP68910.1|  946|Caenorhabditis elegans Hypothetical
           protein W02D3.10b protein.
          Length = 946

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
 Frame = -3

Query: 567 VSFNHRMFNINYENKTKY-----TDKINLLISPVFICRC 466
           ++  HR+ NIN E+  K+     TDK  +L S   +C C
Sbjct: 337 LTVGHRILNINVESAKKFLTFIRTDKYRVLSSEFGLCLC 375


>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
           protein W02D3.10a protein.
          Length = 1437

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
 Frame = -3

Query: 567 VSFNHRMFNINYENKTKY-----TDKINLLISPVFICRC 466
           ++  HR+ NIN E+  K+     TDK  +L S   +C C
Sbjct: 337 LTVGHRILNINVESAKKFLTFIRTDKYRVLSSEFGLCLC 375


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,406,523
Number of Sequences: 27780
Number of extensions: 255375
Number of successful extensions: 997
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)