Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10542X
(575 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g09320.1 68417.m01542 nucleoside diphosphate kinase 1 (NDK1) ... 116 1e-26
At4g11010.1 68417.m01790 nucleoside diphosphate kinase 3, mitoch... 108 3e-24
At4g23900.1 68417.m03438 nucleoside diphosphate kinase 4 (NDK4) ... 107 5e-24
At5g63310.1 68418.m07945 nucleotide diphosphate kinase II, chlor... 102 1e-22
At1g17410.1 68414.m02126 nucleoside diphosphate kinase family pr... 42 4e-04
At5g67430.1 68418.m08502 GCN5-related N-acetyltransferase (GNAT)... 30 1.3
At2g34040.2 68415.m04168 apoptosis inhibitory 5 (API5) family pr... 29 1.7
At2g34040.1 68415.m04167 apoptosis inhibitory 5 (API5) family pr... 29 1.7
At1g13080.2 68414.m01517 cytochrome P450 family protein identica... 28 3.9
At1g13080.1 68414.m01516 cytochrome P450 family protein identica... 28 3.9
At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma m... 27 9.0
At2g33540.1 68415.m04111 CTD phosphatase-like protein 3 (CPL3) i... 27 9.0
At2g23000.1 68415.m02743 serine carboxypeptidase S10 family prot... 27 9.0
>At4g09320.1 68417.m01542 nucleoside diphosphate kinase 1 (NDK1)
identical to identical to Nucleoside diphosphate kinase
I (NDK I) (NDP kinase I) (NDPK I) (SP:P39207)
[Arabidopsis thaliana]; contains Pfam PF00334 :
Nucleoside diphosphate kinase domain;
Length = 169
Score = 116 bits (278), Expect = 1e-26
Identities = 52/80 (65%), Positives = 61/80 (76%)
Frame = +1
Query: 256 VVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAKKEIGL 435
VV M+WEG NVV TGR+++GATNPA S+PGTIRGD I +GRN+IHGSDSVESA+KEI L
Sbjct: 90 VVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVESARKEIAL 149
Query: 436 WFTDKEVVGWTPANENWAYE 495
WF D V W + W YE
Sbjct: 150 WFPDGP-VNWQSSVHPWVYE 168
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Frame = +2
Query: 185 QQHYSDLASRPFFPGLVKYMSSG--LWSLWYGRALML 289
++HY DL+S+ FF GLV Y+ SG + +W G+ ++L
Sbjct: 66 EKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVL 102
>At4g11010.1 68417.m01790 nucleoside diphosphate kinase 3,
mitochondrial (NDK3) identical to Nucleoside diphosphate
kinase III, mitochondrial precursor (NDK III) (NDP
kinase III) (NDPK III) (SP:O49203) [Arabidopsis
thaliana]; contains Pfam PF00334 : Nucleoside
diphosphate kinase domain;
Length = 238
Score = 108 bits (259), Expect = 3e-24
Identities = 46/79 (58%), Positives = 60/79 (75%)
Frame = +1
Query: 256 VVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAKKEIGL 435
V+ MVWEG V++ GR+++GAT+P S+PGTIRGDL + VGRNIIHGSD E+AK EI L
Sbjct: 157 VIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTVGRNIIHGSDGPETAKDEISL 216
Query: 436 WFTDKEVVGWTPANENWAY 492
WF +E+V +T +E W Y
Sbjct: 217 WFKPQELVSYTSNSEKWLY 235
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +2
Query: 173 EELLQQHYSDLASRPFFPGLVKYMSSG--LWSLWYG 274
++ Q+HY DL RPFF GL ++SSG + +W G
Sbjct: 129 KDFAQKHYHDLKERPFFNGLCDFLSSGPVIAMVWEG 164
>At4g23900.1 68417.m03438 nucleoside diphosphate kinase 4 (NDK4)
contains Pfam PF00334 : Nucleoside diphosphate kinase
domain; identical to nucleoside diphosphate kinase 4
(GI:11990430) [Arabidopsis thaliana]
Length = 237
Score = 107 bits (257), Expect = 5e-24
Identities = 47/79 (59%), Positives = 59/79 (74%)
Frame = +1
Query: 256 VVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAKKEIGL 435
VV MVWEG V++ GR+++GAT+P S+PGTIRGDL + VGRNIIHGSD E+AK EI L
Sbjct: 156 VVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEISL 215
Query: 436 WFTDKEVVGWTPANENWAY 492
WF +E+V +T E W Y
Sbjct: 216 WFKPEELVSYTSNAEKWIY 234
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +2
Query: 185 QQHYSDLASRPFFPGLVKYMSSG--LWSLWYGRALM 286
Q+HY DL RPFF GL ++SSG + +W G ++
Sbjct: 132 QKHYHDLKERPFFNGLCNFLSSGPVVAMVWEGEGVI 167
>At5g63310.1 68418.m07945 nucleotide diphosphate kinase II,
chloroplast (NDPK2) identical to SP|O64903 Nucleoside
diphosphate kinase II, chloroplast precursor (NDK II)
(NDP kinase II) (NDPK II) (NDPK Ia) [Arabidopsis
thaliana]; contains Pfam PF00334 : Nucleoside
diphosphate kinase domain; contains Pfam profile
PF00334: Nucleoside diphosphate kinase
Length = 231
Score = 102 bits (245), Expect = 1e-22
Identities = 43/80 (53%), Positives = 57/80 (71%)
Frame = +1
Query: 256 VVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVESAKKEIGL 435
VV M WEG+ VV + R+++G T+P ++PGTIRGDL +Q GRNI+HGSDS E+ K+EIGL
Sbjct: 152 VVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGL 211
Query: 436 WFTDKEVVGWTPANENWAYE 495
WF + E+ W A W E
Sbjct: 212 WFKEGELCKWDSALATWLRE 231
Score = 39.1 bits (87), Expect = 0.002
Identities = 13/27 (48%), Positives = 23/27 (85%)
Frame = +2
Query: 173 EELLQQHYSDLASRPFFPGLVKYMSSG 253
+EL ++HY DL+++ FFP L++Y++SG
Sbjct: 124 KELAEEHYKDLSAKSFFPNLIEYITSG 150
>At1g17410.1 68414.m02126 nucleoside diphosphate kinase family
protein contains Pfam PF00334 : Nucleoside diphosphate
kinase domain; similar to Nucleoside diphosphate kinase
homolog 5 (NDK-H 5) (NDP kinase homolog 5) (nm23-H5)
(Testis-specific nm23 homolog) (Inhibitor of p53-induced
apoptosis-beta) (IPIA-beta) (SP:P56597) {Homo sapiens}
Length = 181
Score = 41.5 bits (93), Expect = 4e-04
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +1
Query: 178 TSPATLQRFGIPAFLPWSSKVHEFRTVVPMVWEGLNVVKTGRQMLGATNPAD---SQPGT 348
T+ A + +F P V+ MV E N V R ++G T+ S P +
Sbjct: 75 TASAFYEEHSSRSFFPHLVTYMTSGPVLVMVLEKRNAVSDWRDLIGPTDAEKAKISHPHS 134
Query: 349 IRGDLCIQVGRNIIHGSDSVESAKKEIGLWFTD 447
IR +N +HGSDS SA++EI +F D
Sbjct: 135 IRALCGKNSQKNCVHGSDSTSSAEREIKFFFKD 167
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 173 EELLQQHYSDLASRPFFPGLVKYMSSG 253
+E Y + +SR FFP LV YM+SG
Sbjct: 73 KETASAFYEEHSSRSFFPHLVTYMTSG 99
>At5g67430.1 68418.m08502 GCN5-related N-acetyltransferase (GNAT)
family protein contains Pfam profile PF00583:
acetyltransferase, GNAT family
Length = 386
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 408 NAVRTMDDVTPNLNAEITADSAGLRVS 328
NA+R DDV+P +N A +GLRVS
Sbjct: 79 NALRQADDVSPEINTTKLAFVSGLRVS 105
>At2g34040.2 68415.m04168 apoptosis inhibitory 5 (API5) family
protein contains Pfam domain PF05918 Apoptosis
inhibitory protein 5 (API5)
Length = 442
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 488 AQFSFAGVQPTTSLSVNQRPISFLADSTLSEPWMMLRP 375
A F+ AGV PTT + ++ ++F+ D + +L+P
Sbjct: 144 ALFTHAGVTPTTDDQIREKVLNFIRDKVIPLKGELLKP 181
>At2g34040.1 68415.m04167 apoptosis inhibitory 5 (API5) family
protein contains Pfam domain PF05918 Apoptosis
inhibitory protein 5 (API5)
Length = 553
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 488 AQFSFAGVQPTTSLSVNQRPISFLADSTLSEPWMMLRP 375
A F+ AGV PTT + ++ ++F+ D + +L+P
Sbjct: 144 ALFTHAGVTPTTDDQIREKVLNFIRDKVIPLKGELLKP 181
>At1g13080.2 68414.m01517 cytochrome P450 family protein identical
to gb|D78605 cytochrome P450 monooxygenase from
Arabidopsis thaliana and is a member of the PF|00067
Cytochrome P450 family. ESTs gb|Z18072, gb|Z35218 and
gb|T43466 come from this gene
Length = 384
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 77 RSIFSLTSILLCFFSSITSSNSTGFTWCRIRHEELLQQHYSDLAS---RPFFPG 229
++ FSLT+ ++C + + N +GF + R EEL+ + L + FFPG
Sbjct: 54 KTFFSLTASIICRVALGQNFNESGFVIDQDRIEELVTESAEALGTFTFSDFFPG 107
>At1g13080.1 68414.m01516 cytochrome P450 family protein identical
to gb|D78605 cytochrome P450 monooxygenase from
Arabidopsis thaliana and is a member of the PF|00067
Cytochrome P450 family. ESTs gb|Z18072, gb|Z35218 and
gb|T43466 come from this gene
Length = 502
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 77 RSIFSLTSILLCFFSSITSSNSTGFTWCRIRHEELLQQHYSDLAS---RPFFPG 229
++ FSLT+ ++C + + N +GF + R EEL+ + L + FFPG
Sbjct: 172 KTFFSLTASIICRVALGQNFNESGFVIDQDRIEELVTESAEALGTFTFSDFFPG 225
>At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma
membrane-type / Ca2+-ATPase, isoform 4 (ACA4) identical
to SP|O22218 Calcium-transporting ATPase 4, plasma
membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4)
{Arabidopsis thaliana}
Length = 1030
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 56 TILGKTGRSIFSLTSILLCFFSSITSSNSTGFT 154
TI+GK G S LT ++LC + + S FT
Sbjct: 350 TIIGKIGLSFAVLTFVVLCIRFVLDKATSGSFT 382
>At2g33540.1 68415.m04111 CTD phosphatase-like protein 3 (CPL3)
identical to CTD phosphatase-like 3 (CPL3) [Arabidopsis
thaliana] GI:22212705; contains Pfam profile PF03031: NLI
interacting factor
Length = 1241
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 128 TSSNSTGFTWCRIRHEELLQQHYSDLASRPFFPGLVKYMSSGLWS 262
T NS F RHEE+L++ +P + L +++ G+W+
Sbjct: 937 TLLNSAKFNEVESRHEEILRKKEEQDREKP-YRHLFRFLHMGMWT 980
>At2g23000.1 68415.m02743 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]
Length = 437
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Frame = -3
Query: 531 ENKTKYTDKINLLISPVFICRCPAHNFFVRKPEAYF-LFSRFNAVRTMDDVTPNLNAEIT 355
E K TDKIN + I C + P+ Y+ L+ + V L+
Sbjct: 262 EEYHKCTDKINT--QHILIPDCDKKGHGITSPDCYYYLYFLIECWANNERVREALHV--- 316
Query: 354 ADSAGLRVSWVSCAKHLTASLHNIKALPYHRDHS 253
+ G + W C + + I ++PYH D+S
Sbjct: 317 --TKGTKGQWQRCNWTIPYDNNIISSVPYHMDNS 348
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,598,094
Number of Sequences: 28952
Number of extensions: 235013
Number of successful extensions: 748
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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