Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10539
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    25   0.82 
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    25   0.82 
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    25   0.82 
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   2.5  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   2.5  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   7.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   7.6  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -1

Query: 644 VPFEATSHALLSGVN*FATFRALRVISGFERHCARLTYPVRRVGTKSSS 498
           V F  T  ALL G   + T   L +I+    +CA      R VG  S++
Sbjct: 141 VVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCRAVGNASTA 189


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -1

Query: 644 VPFEATSHALLSGVN*FATFRALRVISGFERHCARLTYPVRRVGTKSSS 498
           V F  T  ALL G   + T   L +I+    +CA      R VG  S++
Sbjct: 141 VVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCRAVGNASTA 189


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -1

Query: 644 VPFEATSHALLSGVN*FATFRALRVISGFERHCARLTYPVRRVGTKSSS 498
           V F  T  ALL G   + T   L +I+    +CA      R VG  S++
Sbjct: 141 VVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCRAVGNASTA 189


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = -3

Query: 348 YSYNSTR-NTLY-FNTIYSNY*NHQKYYS 268
           Y +N  + N  Y +N  YSNY N+Q+ +S
Sbjct: 204 YQFNDPQFNFNYQYNQAYSNYNNYQEGFS 232


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = -3

Query: 348 YSYNSTR-NTLY-FNTIYSNY*NHQKYYS 268
           Y +N  + N  Y +N  YSNY N+Q+ +S
Sbjct: 224 YQFNDPQFNFNYQYNQAYSNYNNYQEGFS 252


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 498 GARLRSDSTNRIS*ASTMPFKP 563
           GAR  +DST+    AST   +P
Sbjct: 53  GARSNADSTSHTDGASTPDVRP 74


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 498 GARLRSDSTNRIS*ASTMPFKP 563
           GAR  +DST+    AST   +P
Sbjct: 209 GARSNADSTSHTDGASTPDVRP 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,391
Number of Sequences: 336
Number of extensions: 2510
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)