Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10539
         (719 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80955-3|AAM97944.1|   95|Caenorhabditis elegans Mlp/crp family ...    73   3e-13
U80955-2|AAM97946.1|  181|Caenorhabditis elegans Mlp/crp family ...    73   3e-13
U80955-1|AAM97945.1|  113|Caenorhabditis elegans Mlp/crp family ...    73   3e-13
U40933-3|AAL27241.1|   85|Caenorhabditis elegans Temporarily ass...    36   0.038
U58749-7|AAK18878.1|   84|Caenorhabditis elegans Hypothetical pr...    33   0.21 
Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical pr...    30   1.9  
L08403-3|AAT92076.1|  335|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z49887-3|CAC70079.1|  639|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z49887-2|CAA90057.1|  625|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AF068867-1|AAC35506.1|  639|Caenorhabditis elegans putative acti...    29   2.5  
Z99279-1|CAB16496.4|  598|Caenorhabditis elegans Hypothetical pr...    29   4.4  

>U80955-3|AAM97944.1|   95|Caenorhabditis elegans Mlp/crp family
           (muscle lim protein/cysteine-rich protein) protein 1,
           isoform a protein.
          Length = 95

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = +3

Query: 549 MPFKPADNPKCPKCGKSVYAAXERVAGGLKWHKMCFQ 659
           MPFKP ++PKCPKCGKSVYAA E  AGG KWHK CF+
Sbjct: 1   MPFKPVEHPKCPKCGKSVYAAEEMSAGGYKWHKFCFK 37



 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 646 KCASKCGLCQKLLDSTNCSEHEGE 717
           K   KC +C KLLDS   + HE E
Sbjct: 33  KFCFKCNMCNKLLDSCTVAPHEAE 56


>U80955-2|AAM97946.1|  181|Caenorhabditis elegans Mlp/crp family
           (muscle lim protein/cysteine-rich protein) protein 1,
           isoform c protein.
          Length = 181

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = +3

Query: 549 MPFKPADNPKCPKCGKSVYAAXERVAGGLKWHKMCFQ 659
           MPFKP ++PKCPKCGKSVYAA E  AGG KWHK CF+
Sbjct: 1   MPFKPVEHPKCPKCGKSVYAAEEMSAGGYKWHKFCFK 37



 Score = 33.9 bits (74), Expect = 0.12
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 646 KCASKCGLCQKLLDSTNCSEHEGE 717
           K   KC +C KLLDS +C EH+ +
Sbjct: 33  KFCFKCSMCNKLLDSMSCCEHQAQ 56


>U80955-1|AAM97945.1|  113|Caenorhabditis elegans Mlp/crp family
           (muscle lim protein/cysteine-rich protein) protein 1,
           isoform b protein.
          Length = 113

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = +3

Query: 549 MPFKPADNPKCPKCGKSVYAAXERVAGGLKWHKMCFQ 659
           MPFKP ++PKCPKCGKSVYAA E  AGG KWHK CF+
Sbjct: 1   MPFKPVEHPKCPKCGKSVYAAEEMSAGGYKWHKFCFK 37



 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 646 KCASKCGLCQKLLDSTNCSEHEGE 717
           K   KC +C KLLDS   + HE E
Sbjct: 33  KFCFKCNMCNKLLDSCTVAPHEAE 56


>U40933-3|AAL27241.1|   85|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 291 protein.
          Length = 85

 Score = 35.5 bits (78), Expect = 0.038
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 573 PKCPKCGKSVYAAXERVAGGLKWHKMCFQ 659
           P CP+C K+VY A    + G  WH+ C +
Sbjct: 2   PNCPRCQKAVYFAERVTSIGFDWHRPCLR 30


>U58749-7|AAK18878.1|   84|Caenorhabditis elegans Hypothetical
           protein B0496.7 protein.
          Length = 84

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 573 PKCPKCGKSVYAAXERVAG-GLKWHKMCFQ 659
           P CP C K VY A ERV+  G  WH+ C +
Sbjct: 2   PNCPNCQKPVYFA-ERVSSLGKDWHRPCLK 30


>Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical
           protein M195.2 protein.
          Length = 419

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 550 CLSNPLITRSARNVANQFTPLRSAWLVASNGTKCASKC 663
           C SNP  + S      Q TPL+ +  V  +G KC S C
Sbjct: 131 CQSNPSASSSQSQTTTQ-TPLKVSIKVLDDGAKCMSTC 167


>L08403-3|AAT92076.1|  335|Caenorhabditis elegans Hypothetical
           protein F42H10.3 protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +3

Query: 576 KCPK--CGKSVYAAXERVAGGLKWHKMCFQ 659
           KC +  CGK+VY   E       WHK CF+
Sbjct: 4   KCAREDCGKTVYPVEELKCLDKVWHKQCFK 33


>Z49887-3|CAC70079.1|  639|Caenorhabditis elegans Hypothetical
           protein F09B9.2b protein.
          Length = 639

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 540 ASTMPFKPADNPK-CPKCGKSVYAAXERVAGGLKWHKMCFQ 659
           A+     P  +P  C  C +++++    +A GL WH  CF+
Sbjct: 117 ATLQQISPLGSPTTCAACDQALHSGQVLLALGLSWHVYCFK 157


>Z49887-2|CAA90057.1|  625|Caenorhabditis elegans Hypothetical
           protein F09B9.2a protein.
          Length = 625

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 540 ASTMPFKPADNPK-CPKCGKSVYAAXERVAGGLKWHKMCFQ 659
           A+     P  +P  C  C +++++    +A GL WH  CF+
Sbjct: 103 ATLQQISPLGSPTTCAACDQALHSGQVLLALGLSWHVYCFK 143


>AF068867-1|AAC35506.1|  639|Caenorhabditis elegans putative
           actin-binding proteinUNC-115 protein.
          Length = 639

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 540 ASTMPFKPADNPK-CPKCGKSVYAAXERVAGGLKWHKMCFQ 659
           A+     P  +P  C  C +++++    +A GL WH  CF+
Sbjct: 117 ATLQQISPLGSPTTCAACDQALHSGQVLLALGLSWHVYCFK 157


>Z99279-1|CAB16496.4|  598|Caenorhabditis elegans Hypothetical
           protein Y57G11A.1a protein.
          Length = 598

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 576 KCPKCGKSVYAAXERVAGGLKWHKMCFQ 659
           KC  C K+VY A +    GL +H  CF+
Sbjct: 507 KCSLCTKNVYRAEQFQCFGLLYHVNCFR 534


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,316,336
Number of Sequences: 27780
Number of extensions: 220045
Number of successful extensions: 600
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)