Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10538
(762 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 155 9e-37
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 146 5e-34
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 145 9e-34
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 120 5e-26
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 110 4e-23
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 110 4e-23
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 101 1e-20
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 97 6e-19
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 95 2e-18
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 89 8e-17
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 89 1e-16
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 85 2e-15
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 85 2e-15
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 84 4e-15
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 81 2e-14
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 79 9e-14
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 77 4e-13
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 76 1e-12
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 71 3e-11
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 71 4e-11
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 59 1e-07
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 59 1e-07
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 57 4e-07
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 56 1e-06
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 56 1e-06
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 55 2e-06
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 54 3e-06
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 54 3e-06
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 54 4e-06
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 53 9e-06
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 51 4e-05
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 51 4e-05
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 50 5e-05
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 50 6e-05
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 49 1e-04
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 48 2e-04
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 47 4e-04
UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 46 0.001
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 45 0.002
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 45 0.002
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 45 0.002
UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3; Phaeophyceae... 44 0.004
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 44 0.005
UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria ro... 43 0.010
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 43 0.010
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 43 0.010
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 43 0.010
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 42 0.013
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 42 0.013
UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole geno... 42 0.022
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 42 0.022
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 41 0.038
UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8... 40 0.051
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 40 0.089
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.089
UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 - Ba... 40 0.089
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 39 0.12
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 39 0.12
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 39 0.12
UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymu... 39 0.16
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 39 0.16
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.16
UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1; Medi... 38 0.21
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 38 0.21
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.27
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.27
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 38 0.36
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 38 0.36
UniRef50_Q8CM44 Cluster: DNA gyrase subunit A; n=4; Leptospira|R... 37 0.47
UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5; Tetrahymena|... 37 0.47
UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.83
UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;... 36 0.83
UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2... 36 1.1
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 35 1.9
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 35 1.9
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 35 2.5
UniRef50_Q7WEV5 Cluster: Rod shape-determining protein; n=4; Bor... 35 2.5
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 34 3.3
UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1; Th... 34 3.3
UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2... 34 3.3
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 34 3.3
UniRef50_Q3IKS7 Cluster: Putative uncharacterized protein; n=2; ... 34 4.4
UniRef50_A1SQS0 Cluster: Putative uncharacterized protein precur... 33 5.8
UniRef50_Q17A88 Cluster: Sensory neuron membrane protein-1; n=3;... 33 5.8
UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 155 bits (377), Expect = 9e-37
Identities = 70/95 (73%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
Frame = +3
Query: 228 LLPKALHR-PFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 404
+ P+ +H FVYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATV
Sbjct: 77 IAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATV 136
Query: 405 IGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAG 509
I HN D K+TRVKLPSGAKKV+PS+NR MVGIVAG
Sbjct: 137 IAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAG 171
Score = 152 bits (369), Expect = 8e-36
Identities = 70/80 (87%), Positives = 75/80 (93%)
Frame = +2
Query: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 181
GRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAVV
Sbjct: 2 GRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVV 61
Query: 182 HFRDPYKFKTRKELFIAPEG 241
HFRDPY++K RKELFIAPEG
Sbjct: 62 HFRDPYRYKIRKELFIAPEG 81
Score = 148 bits (359), Expect = 1e-34
Identities = 67/69 (97%), Positives = 67/69 (97%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA
Sbjct: 172 GGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 231
Query: 689 GRKVGLIAA 715
GRKVGLIAA
Sbjct: 232 GRKVGLIAA 240
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 146 bits (354), Expect = 5e-34
Identities = 65/85 (76%), Positives = 76/85 (89%)
Frame = +3
Query: 255 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 434
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 435 RVKLPSGAKKVLPSSNRGMVGIVAG 509
RVKLPSG+KKV+ S+NR +VG+VAG
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVAG 171
Score = 137 bits (332), Expect = 2e-31
Identities = 63/80 (78%), Positives = 70/80 (87%)
Frame = +2
Query: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 181
GRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V
Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKV 61
Query: 182 HFRDPYKFKTRKELFIAPEG 241
FRDPY+FK R ELFIA EG
Sbjct: 62 VFRDPYRFKKRTELFIAAEG 81
Score = 136 bits (330), Expect = 4e-31
Identities = 60/69 (86%), Positives = 62/69 (89%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 689 GRKVGLIAA 715
GRKVGLIAA
Sbjct: 232 GRKVGLIAA 240
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 145 bits (352), Expect = 9e-34
Identities = 64/69 (92%), Positives = 66/69 (95%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GGRIDKP+LKAGRAYHKYK KRNCWP VRGVAMNPVEHPHGGGNHQHIGKASTV+R TSA
Sbjct: 148 GGRIDKPMLKAGRAYHKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVRRDTSA 207
Query: 689 GRKVGLIAA 715
GRKVGLIAA
Sbjct: 208 GRKVGLIAA 216
Score = 133 bits (321), Expect = 5e-30
Identities = 60/80 (75%), Positives = 68/80 (85%)
Frame = +2
Query: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 181
GRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA V
Sbjct: 2 GRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAKV 61
Query: 182 HFRDPYKFKTRKELFIAPEG 241
FRDPYK+K R E FIA EG
Sbjct: 62 TFRDPYKYKMRTETFIATEG 81
Score = 91.5 bits (217), Expect = 2e-17
Identities = 48/99 (48%), Positives = 61/99 (61%)
Frame = +3
Query: 213 GRSSSLLPKALHRPFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGN 392
GR + L P+ Y + T M G I C + + RG+LARASGN
Sbjct: 53 GRGAPLAKVTFRDPYKYKMRTETFIATEGMYTGQF----IYCGKKANLQIRGKLARASGN 108
Query: 393 FATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAG 509
+ATVI HNPD K++RVKLPSG+KKV+PS+NR +VGIVAG
Sbjct: 109 YATVISHNPDTKKSRVKLPSGSKKVIPSANRAIVGIVAG 147
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 120 bits (288), Expect = 5e-26
Identities = 57/82 (69%), Positives = 65/82 (79%)
Frame = +2
Query: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 181
GRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA V
Sbjct: 2 GRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARV 61
Query: 182 HFRDPYKFKTRKELFIAPEGST 247
FR P++FK +KELF+ E T
Sbjct: 62 TFRHPFRFKKQKELFVXXEVCT 83
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 258 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDR 365
+YCGKKATL VGNV+P+ ++PEG + +G R
Sbjct: 88 LYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHVGYR 123
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 110 bits (264), Expect = 4e-23
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +2
Query: 11 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 190
IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 191 DPYKFKTRK 217
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 110 bits (264), Expect = 4e-23
Identities = 45/69 (65%), Positives = 58/69 (84%)
Frame = +3
Query: 255 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 434
++YCG KA+L +GNV+P+G PEGT+VCN+E K GDRG +ARASGN+ATVI HN D + T
Sbjct: 78 YIYCGSKASLHIGNVLPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNADNETT 137
Query: 435 RVKLPSGAK 461
R++LPSGAK
Sbjct: 138 RIRLPSGAK 146
Score = 54.0 bits (124), Expect = 4e-06
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2
Query: 122 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 241
+G+VK I HDPGRGAPLA V FR+P ++ KELFI EG
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEG 72
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 101 bits (243), Expect = 1e-20
Identities = 47/68 (69%), Positives = 52/68 (76%)
Frame = +2
Query: 512 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 691
GRI+KPI+KAG AYHK+KVK WP VRGVAMN V+HP GGG HQH G+ STV R G
Sbjct: 163 GRIEKPIMKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGGGRHQHKGRPSTVARTAPPG 222
Query: 692 RKVGLIAA 715
RKVG IAA
Sbjct: 223 RKVGHIAA 230
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = +3
Query: 267 GKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 446
G A E GN++P+G +PEGT V N+E + GD G+LAR +G++A V+G +T ++L
Sbjct: 83 GPAAKPEAGNILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYALVVGR--AGAKTILRL 140
Query: 447 PSGAKKVLPSSNRGMVGIVAG 509
PSG K +P+ +R +GI AG
Sbjct: 141 PSGKDKEVPNDSRATIGIPAG 161
Score = 33.9 bits (74), Expect = 4.4
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 GRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 178
G+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 2 GKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLAR 57
Query: 179 VHFRDPYKF 205
V D +F
Sbjct: 58 VVREDGVEF 66
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 96.7 bits (230), Expect = 6e-19
Identities = 44/69 (63%), Positives = 49/69 (71%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GG +KP+LKAG Y KYKVK WP+VRGVAMN V HPHGGG HQ + + STV R
Sbjct: 161 GGVTEKPLLKAGNNYWKYKVKAKKWPHVRGVAMNAVSHPHGGGLHQSVSRPSTVSRNAPP 220
Query: 689 GRKVGLIAA 715
GRKVG IAA
Sbjct: 221 GRKVGHIAA 229
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +3
Query: 258 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 437
+ GK A + GN++ VG +PEGTI+ N+E+ GD G+ AR++G + V+G D +
Sbjct: 79 IQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGKTGD--KVL 136
Query: 438 VKLPSGAKKVLPSSNRGMVGIVAG 509
VKL S + S+ R +VG+VAG
Sbjct: 137 VKLSSEKIAQVSSNARAIVGVVAG 160
Score = 40.3 bits (90), Expect = 0.051
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 GRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 178
G+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA+
Sbjct: 2 GKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLAL 56
Query: 179 VHFRDPYKF 205
+ D KF
Sbjct: 57 IKLDDGTKF 65
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 94.7 bits (225), Expect = 2e-18
Identities = 43/68 (63%), Positives = 49/68 (72%)
Frame = +2
Query: 512 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 691
GR +KP+LKAG AY+K+K K WP VRGVAMN V HPHGGGNHQ G +TV R G
Sbjct: 167 GRDEKPLLKAGNAYYKWKAKAKKWPVVRGVAMNAVNHPHGGGNHQSPGYPTTVARNAPPG 226
Query: 692 RKVGLIAA 715
+KVG IAA
Sbjct: 227 QKVGHIAA 234
Score = 62.9 bits (146), Expect = 8e-09
Identities = 32/84 (38%), Positives = 52/84 (61%)
Frame = +3
Query: 258 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 437
V G A GN++P+ A+PEGT + N+E + GD G+LAR+ G +A ++G + ++
Sbjct: 84 VQIGPNAAPVNGNILPLYAIPEGTQIFNVEIRPGDGGKLARSGGAYAILVGKSGNS--AI 141
Query: 438 VKLPSGAKKVLPSSNRGMVGIVAG 509
++LPSG K + + R +GI AG
Sbjct: 142 IQLPSGKVKQVNAKARATIGIAAG 165
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 89.4 bits (212), Expect = 8e-17
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GG+ +KP +KAG+ Y+ + K WP VRGVAMN V+HP GGGNHQ GK +T+ RG
Sbjct: 166 GGKREKPFVKAGKKYYHMRSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGKPTTIARGDPP 225
Query: 689 GRKVGLIAA 715
GRKVG IAA
Sbjct: 226 GRKVGHIAA 234
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +3
Query: 258 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 437
+ CG A ++ GN +P+ +PEG + N+E + GD G+ ARA G +AT+I H D RT
Sbjct: 84 IECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPGCYATIIAH--DVGRTY 141
Query: 438 VKLPSGAKKVLPSSNRGMVGIVAG 509
V+LPSG + R +G+++G
Sbjct: 142 VQLPSGKVRTFDPRCRATIGVMSG 165
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 2 GRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 178
G+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A
Sbjct: 2 GKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVAR 61
Query: 179 VHFRDPYKFKTRKELFIAPEGS 244
V F D + L + PEG+
Sbjct: 62 VRFED-----GEERLILVPEGT 78
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/70 (58%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV-KRGTS 685
GG DKP+LKA A++K K + + +P VRGVAMNPVEH HGGGNHQH+GK +TV K+ S
Sbjct: 158 GGIHDKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGKPTTVSKKDIS 217
Query: 686 AGRKVGLIAA 715
+K+GL+ A
Sbjct: 218 QEQKIGLVGA 227
Score = 66.9 bits (156), Expect = 5e-10
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +3
Query: 258 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 437
+ G A +++GN+ + +PEG V ++E GD G A +G+++ V+ H + T
Sbjct: 74 ILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHRKETNETV 133
Query: 438 VKLPSGAKKVLPSSNRGMVGIVAG 509
+K+PSG K + S R +VG+VAG
Sbjct: 134 IKIPSGKKLTVSSECRCIVGVVAG 157
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +3
Query: 258 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 437
V GK A+ + GN+M +G +PEGT++ N+E++ GD G+ ARA G +A VIG P+ +T
Sbjct: 80 VEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVVIGQKPEENKTI 139
Query: 438 VKLPSGAKKVLPSSNRGMVGIVAG 509
++LPSG + S R VGIVAG
Sbjct: 140 IRLPSGRTVEVDSRGRATVGIVAG 163
Score = 74.5 bits (175), Expect = 3e-12
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GGRI+KP LKAG+ YH+ + K +P VRG AM+P HPHGGG+HQ G + V +
Sbjct: 164 GGRIEKPFLKAGKKYHRARAKAWKYPTVRGKAMSPYAHPHGGGSHQKGG--TPVPKTAPP 221
Query: 689 GRKVGLIAA 715
G+KVG I +
Sbjct: 222 GQKVGFIGS 230
Score = 36.7 bits (81), Expect = 0.63
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 2 GRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 178
G+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A
Sbjct: 2 GKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVAK 57
Query: 179 V 181
+
Sbjct: 58 I 58
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 84.6 bits (200), Expect = 2e-15
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +2
Query: 512 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 691
GR+D+P LKAG+ YHK K + +P V VAMNP +HP GGG +H GK +TV R G
Sbjct: 164 GRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPG 223
Query: 692 RKVGLIAA 715
RKVGLIAA
Sbjct: 224 RKVGLIAA 231
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +3
Query: 258 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 437
+ CG A ++ GN++P+G +PEG +CN+E K D G+ R+SG +ATV+ H +A RT
Sbjct: 81 IECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTH--EATRTA 138
Query: 438 VKLPSGAKKVLPSSNRGMVGIVAG 509
V +PSG K L R +VGIVAG
Sbjct: 139 VSMPSGNIKWLNPKCRAVVGIVAG 162
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 83.8 bits (198), Expect = 4e-15
Identities = 37/69 (53%), Positives = 48/69 (69%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GG+ +KP+LKAG+ Y+K+K +P V+ + HPHGGGNHQHIG STV R +
Sbjct: 198 GGKYEKPLLKAGKNYYKFKSLNKKYPIVKIFYLGKENHPHGGGNHQHIGHPSTVSRRSPP 257
Query: 689 GRKVGLIAA 715
G+KVGLIAA
Sbjct: 258 GQKVGLIAA 266
Score = 80.2 bits (189), Expect = 5e-14
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = +3
Query: 258 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 437
+ CG +A GNV+P+ +P G VCN+EEK GD G+LAR++G F V+ H+ T+
Sbjct: 114 IACGLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGGKLARSAGAFVGVLSHSKYNNVTK 173
Query: 438 VKLPSGAKKVLPSSNRGMVGIVAG 509
+KLPS K+L S R +G+VAG
Sbjct: 174 LKLPSKKIKILSSFCRATIGVVAG 197
Score = 41.5 bits (93), Expect = 0.022
Identities = 24/79 (30%), Positives = 37/79 (46%)
Frame = +2
Query: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 181
G++I AQRKG + +R G +S+ E++ IKG++ D + P +
Sbjct: 28 GKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIKI 87
Query: 182 HFRDPYKFKTRKELFIAPE 238
F FK EL+IA E
Sbjct: 88 KFNVTKYFKNYYELYIAVE 106
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/68 (60%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +2
Query: 512 GRIDKPILKAGRAYHKYKVKRNCWPY-VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
G ID PILKAG H + K PY VRGVAMN V HPHGGGNHQH+G+ STV R
Sbjct: 158 GIIDAPILKAGTHVHYLRSKAKR-PYTVRGVAMNAVNHPHGGGNHQHVGRPSTVGRNAPP 216
Query: 689 GRKVGLIA 712
GRKVG ++
Sbjct: 217 GRKVGRLS 224
Score = 56.8 bits (131), Expect = 5e-07
Identities = 32/104 (30%), Positives = 48/104 (46%)
Frame = +3
Query: 258 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 437
+ G T+ G + +P+G+ V N+E GD G R++G FA V+ H R
Sbjct: 76 IVAGNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSH---GSRVT 132
Query: 438 VKLPSGAKKVLPSSNRGMVGIVAGVDVLTNLF*KLEGHTTSTRS 569
+KLPSG+ + R VG+VA ++ K H RS
Sbjct: 133 LKLPSGSMRDFDPRCRATVGVVAASGIIDAPILKAGTHVHYLRS 176
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 79.4 bits (187), Expect = 9e-14
Identities = 35/69 (50%), Positives = 44/69 (63%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GG ++P + AG + +K K +P VRGVA HPHGGG HQH+G++STV R T
Sbjct: 164 GGASERPFMSAGGKWRNFKAKGKKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRDTPP 223
Query: 689 GRKVGLIAA 715
G KVG IAA
Sbjct: 224 GAKVGSIAA 232
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +3
Query: 267 GKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 446
G K+ +E GNV+ + +P+GTIVCN+E+ GD G + +++G ATV H + VKL
Sbjct: 85 GLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEG--VTVKL 142
Query: 447 PSGAKKVLPSSNRGMVGIVAG 509
PSG L NR M+G +AG
Sbjct: 143 PSGKFTTLNPKNRAMIGTLAG 163
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 77.4 bits (182), Expect = 4e-13
Identities = 34/45 (75%), Positives = 40/45 (88%)
Frame = +2
Query: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 136
GRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GG ++P + AG + +++ K +P VRGVA HPHGGG HQH+G++STV R
Sbjct: 163 GGVSERPFMSAGGKWRRFRSKGRKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRNAPP 222
Query: 689 GRKVGLIAA 715
G KVG IAA
Sbjct: 223 GAKVGSIAA 231
Score = 66.9 bits (156), Expect = 5e-10
Identities = 39/101 (38%), Positives = 52/101 (51%)
Frame = +3
Query: 267 GKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 446
G K+ + GNV+ V +P+GT VCN+E+ GD G + +++G ATV H +KL
Sbjct: 84 GLKSEIRDGNVISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHGEGG--VVLKL 141
Query: 447 PSGAKKVLPSSNRGMVGIVAGVDVLTNLF*KLEGHTTSTRS 569
PSG L NR MVG +AG V F G RS
Sbjct: 142 PSGRFSTLNPKNRAMVGTLAGGGVSERPFMSAGGKWRRFRS 182
Score = 33.9 bits (74), Expect = 4.4
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 20 QRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 193
+R+G G + F + T + K + + E+ +G V D++H+ GR APLA + F D
Sbjct: 8 RRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLAKIRFED 63
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/84 (41%), Positives = 54/84 (64%)
Frame = +3
Query: 258 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 437
VY GK+A +G++ P+ +PEGT + LE GD G+L RASG+FA ++ D +
Sbjct: 81 VYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVRASGDFALLVQKLGD--KVI 138
Query: 438 VKLPSGAKKVLPSSNRGMVGIVAG 509
V+LPSG K L ++ R ++G++AG
Sbjct: 139 VQLPSGQFKTLSANARAVIGVIAG 162
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/69 (43%), Positives = 37/69 (53%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GGR +KP +KAG Y+ + WP V GV N +HP GG H + K TV +
Sbjct: 163 GGRKEKPFVKAGNKYYWASSRNRHWPVVNGVKKNASDHPFGGKRHSNHSKPFTVSKWAPP 222
Query: 689 GRKVGLIAA 715
GRKVG I A
Sbjct: 223 GRKVGYIGA 231
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/79 (43%), Positives = 48/79 (60%)
Frame = -3
Query: 745 LASTNPSGPASSNKTNFATSRCSSLDSGSLTYMLMVTTTVRMLYRVHGNTTYIWPAVTFD 566
L S+ PASSN+T+F SR S D +L+V T+ ML+RVHG+T + WPA+
Sbjct: 9 LGSSETPCPASSNETHFPASRGISADGRGFANVLVVATSKGMLHRVHGHTPHAWPAIPLG 68
Query: 565 LVLVVCPSSFQNRFVNTST 509
L+LV+ + QN VN +T
Sbjct: 69 LILVIGTAGLQNGLVNAAT 87
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/76 (38%), Positives = 45/76 (59%)
Frame = +3
Query: 288 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 467
VGN +P+ +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 468 LPSSNRGMVGIVAGVD 515
+ S R +GIV+ ++
Sbjct: 419 IDSRCRATIGIVSNLN 434
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 670
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 453 PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 481
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 58.8 bits (136), Expect = 1e-07
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +3
Query: 216 RSSSLLPKALHRPF-VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGN 392
+S L PK L V G +A ++VGN +P+ +P GT++ N+E K G G+LAR++G
Sbjct: 101 KSYILAPKGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGGQLARSAGT 160
Query: 393 FATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 503
A ++G + K V+L SG +++ ++R +G V
Sbjct: 161 SAQLLG--KEGKYAIVRLSSGEVRLVLLTSRATIGTV 195
Score = 36.3 bits (80), Expect = 0.83
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2
Query: 536 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 637
KAGR +++ KR P VRG MNP +HPHGGG
Sbjct: 207 KAGRT--RWQGKR---PTVRGSVMNPNDHPHGGG 235
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 57.2 bits (132), Expect = 4e-07
Identities = 36/104 (34%), Positives = 58/104 (55%)
Frame = +3
Query: 195 HTSSRQGRSSSLLPKALHRPFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 374
+ SS+ +SS+ P +L F + +VGN +P+ GT V N+E + G G++
Sbjct: 267 YNSSKPSKSSASSPYSLENQFDIIDLNS--KVGNCIPLANARIGTWVHNIECRPGQGGKM 324
Query: 375 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVA 506
RA+G +A V+ P AK ++LPSGA+K + S +GIV+
Sbjct: 325 VRAAGTYAKVV-QEPGAKCV-LRLPSGAEKAVDSRCHATIGIVS 366
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGGNHQHIGKASTVK---RGTSAGRKVGLIAA 715
P VRGVAMNPV+HPHGGG + G +V + T AG + +A+
Sbjct: 388 PVVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGYRSPSVAS 434
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 56.0 bits (129), Expect = 1e-06
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +3
Query: 258 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 437
+ + A ++VGN P+ +PEGT++ N+E K G G++AR++G ++G + D K
Sbjct: 117 IVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQILGKDDDGKYVT 176
Query: 438 VKLPSG-AKKVL 470
++L SG +KVL
Sbjct: 177 LRLTSGEVRKVL 188
Score = 38.3 bits (85), Expect = 0.21
Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = +2
Query: 563 KVKRNCW----PYVRGVAMNPVEHPHGGG-NHQHIGKASTV 670
K RN W P VRG MNP +HPHGGG IG+ S V
Sbjct: 210 KAGRNRWRGIRPTVRGSVMNPNDHPHGGGEGRTPIGRKSPV 250
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 56.0 bits (129), Expect = 1e-06
Identities = 30/87 (34%), Positives = 49/87 (56%)
Frame = +3
Query: 258 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 437
+ G + +++GN +P+ MP GT + N+E +G G+LARA+G A +I + K
Sbjct: 114 IVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSAT 171
Query: 438 VKLPSGAKKVLPSSNRGMVGIVAGVDV 518
+KLPSG +++ + VG V V V
Sbjct: 172 LKLPSGEVRLISKNCSATVGQVGNVGV 198
Score = 41.5 bits (93), Expect = 0.022
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +2
Query: 578 CW----PYVRGVAMNPVEHPHGGG 637
CW P VRGV MNPV+HPHGGG
Sbjct: 210 CWLGKRPVVRGVVMNPVDHPHGGG 233
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/86 (32%), Positives = 49/86 (56%)
Frame = +3
Query: 258 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 437
V G ++ GN MP+ +MP GTI+ N+E G G++AR++G +A ++G D
Sbjct: 116 VVAGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR--DQGMAI 173
Query: 438 VKLPSGAKKVLPSSNRGMVGIVAGVD 515
++L SG ++++ + VG V+ D
Sbjct: 174 LRLNSGEQRLVSGACFASVGAVSNPD 199
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +2
Query: 536 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 655
KAGR+ ++ KR P+VRGVAMNPV+HPHGGG + G
Sbjct: 207 KAGRSV--WRGKR---PHVRGVAMNPVDHPHGGGEGRTSG 241
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/75 (30%), Positives = 46/75 (61%)
Frame = +3
Query: 282 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 461
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEH 271
Query: 462 KVLPSSNRGMVGIVA 506
+ + + +G+V+
Sbjct: 272 RYVHMNCHATLGVVS 286
Score = 40.3 bits (90), Expect = 0.051
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 536 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 637
KAGR+ H+ K P VRGVAMN +HPHGGG
Sbjct: 297 KAGRSRHRGKR-----PMVRGVAMNAFDHPHGGG 325
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +3
Query: 282 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 461
++ GN MP+ +PEGTIV N+E G G++ARA+G +A V+G + V++PSG
Sbjct: 149 IKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEV 208
Query: 462 KVLPSSNRGMVGIV 503
+++ VG V
Sbjct: 209 RMIHERCMATVGRV 222
Score = 41.9 bits (94), Expect = 0.017
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGGNHQHIGK 658
P+ RG AMNPV+HPHGGG + GK
Sbjct: 245 PHTRGTAMNPVDHPHGGGEGRTRGK 269
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 54.0 bits (124), Expect = 4e-06
Identities = 29/75 (38%), Positives = 43/75 (57%)
Frame = +3
Query: 288 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 467
VGN + + +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 468 LPSSNRGMVGIVAGV 512
+ S R VGIV+ +
Sbjct: 381 IDSRCRATVGIVSNL 395
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 670
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 415 PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 443
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 52.8 bits (121), Expect = 9e-06
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +3
Query: 255 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI-GHNPDAKR 431
FV G + GN +P+ ++P GT+V N+E G G++ RA+G A +I HN K
Sbjct: 209 FVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQLIKKHN---KY 265
Query: 432 TRVKLPSGAKKVLPSSNRGMVGIVAGVD 515
++LPSG K P +GIV+ ++
Sbjct: 266 AILRLPSGELKSFPLQCMATIGIVSNLN 293
Score = 41.9 bits (94), Expect = 0.017
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 670
P VRGVAMNP++HPHGGG + G +V
Sbjct: 312 PTVRGVAMNPIDHPHGGGEGRTSGGRPSV 340
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +3
Query: 291 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 470
GN +P+ MP GT+V N+ + G G+L R++G FATVI ++ ++L SG +++
Sbjct: 213 GNCLPLHMMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLI 272
Query: 471 PSSNRGMVGIVA 506
VG+ +
Sbjct: 273 HKDCCATVGVAS 284
Score = 37.9 bits (84), Expect = 0.27
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +2
Query: 575 NCWPYVRGVAMNPVEHPHGGGNHQHIG 655
N P VRG+AMN EHPHGGG + G
Sbjct: 303 NIRPTVRGLAMNAAEHPHGGGRGKSKG 329
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 50.8 bits (116), Expect = 4e-05
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +3
Query: 285 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 464
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 465 VLPSSNRGMVGIVA 506
++ S R +GIV+
Sbjct: 417 LIDSRCRATIGIVS 430
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGGNHQHIGKASTVK---RGTSAGRKVGL 706
P VRGVAMNPV+HPHGGG + G +V + T AG + G+
Sbjct: 452 PIVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRAGV 495
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 50.4 bits (115), Expect = 5e-05
Identities = 23/79 (29%), Positives = 43/79 (54%)
Frame = +3
Query: 279 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 458
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGE 293
Query: 459 KKVLPSSNRGMVGIVAGVD 515
+ + +G+V+ +D
Sbjct: 294 HRYVSLEAVATIGVVSNID 312
Score = 36.3 bits (80), Expect = 0.83
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGG 637
P VRGVAMN +HPHGGG
Sbjct: 331 PTVRGVAMNKCDHPHGGG 348
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 50.0 bits (114), Expect = 6e-05
Identities = 25/78 (32%), Positives = 45/78 (57%)
Frame = +3
Query: 282 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 461
++ G MP+ +PEGT V N+E G++AR++G++A ++G + K ++L SG
Sbjct: 130 IKPGFSMPLAFIPEGTQVHNIELHPKGGGQIARSAGSYARILGQDETGKYVILQLLSGET 189
Query: 462 KVLPSSNRGMVGIVAGVD 515
+ R VG+V+ +D
Sbjct: 190 RKFLKECRATVGVVSNLD 207
Score = 38.7 bits (86), Expect = 0.16
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = +2
Query: 536 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 637
KAGR H R P VRG AMNP +HPHGGG
Sbjct: 215 KAGRNRH-----RGIRPTVRGSAMNPNDHPHGGG 243
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +3
Query: 288 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 467
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 468 LPSSNRGMVGIVA 506
+ + R +G V+
Sbjct: 73 INAKCRATIGTVS 85
Score = 40.7 bits (91), Expect = 0.038
Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 4/30 (13%)
Frame = +2
Query: 560 YKVKRNCW----PYVRGVAMNPVEHPHGGG 637
YK ++ W P VRGVAMNP +HPHGGG
Sbjct: 95 YKAGQSRWLGIRPKVRGVAMNPCDHPHGGG 124
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/80 (28%), Positives = 48/80 (60%)
Frame = +3
Query: 267 GKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 446
G ++ ++VGN +P+ +P T + N+E G G+L R++G+ AT++ D V+L
Sbjct: 145 GPESDIKVGNALPLKNIPLQTTIHNIELVPGRGGQLCRSAGSAATLVKKADDGGYCVVRL 204
Query: 447 PSGAKKVLPSSNRGMVGIVA 506
PSG ++++ + +G+++
Sbjct: 205 PSGEQRLVLENCMATIGMLS 224
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +3
Query: 288 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 467
+GN + + +P GT++ N+E G + RA+G FA +I R++LPSGA
Sbjct: 122 LGNCVQLAYIPVGTLIHNIEWNPGQGAKFVRAAGTFAQLI--QKHEATVRLRLPSGALAS 179
Query: 468 LPSSNRGMVGIVA 506
+ S R +GIV+
Sbjct: 180 INSQCRATIGIVS 192
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 670
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 214 PVVRGVAMNPVDHPHGGGEGRTKGGRRSV 242
>UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 724
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/27 (74%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +2
Query: 557 KYKVKRNCWPYVRGVAM-NPVEHPHGG 634
K +KRN W VRGVAM NPVEHPHGG
Sbjct: 411 KLMIKRNMWAKVRGVAMMNPVEHPHGG 437
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTS 685
P VRGVAMNPV+HPHGGG + KAS + S
Sbjct: 222 PTVRGVAMNPVDHPHGGGEGKKSKKASPTNKWAS 255
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +2
Query: 560 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 655
YK +N W P VRGVAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWKGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +2
Query: 560 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 655
YK +N W P VRGVAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWRGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
Score = 36.3 bits (80), Expect = 0.83
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 26 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYK 202
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D K
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLDGEK 75
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = +3
Query: 315 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 494
MP GT + N+E +G G+LARA+G A +I + K +KLPSG +++ + V
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATV 60
Query: 495 GIVAGVDV 518
G V V V
Sbjct: 61 GQVGNVGV 68
Score = 41.5 bits (93), Expect = 0.022
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +2
Query: 578 CW----PYVRGVAMNPVEHPHGGG 637
CW P VRGV MNPV+HPHGGG
Sbjct: 80 CWLGKRPVVRGVVMNPVDHPHGGG 103
>UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3;
Phaeophyceae|Rep: Ribosomal protein L2 - Laminaria
digitata
Length = 254
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 670
P VRGVAMNP++HPHGGG + G S+V
Sbjct: 201 PTVRGVAMNPIDHPHGGGEGKTSGGRSSV 229
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 572 RNCWPYVRGVAMNPVEHPHGGG 637
RN P VRGVAMNPV+HPHGGG
Sbjct: 190 RNKRPKVRGVAMNPVDHPHGGG 211
>UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L2 - Cafeteria
roenbergensis
Length = 252
Score = 42.7 bits (96), Expect = 0.010
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKR 676
P VRGVAMNP++HPHGGG + G +V +
Sbjct: 196 PSVRGVAMNPIDHPHGGGEGKTSGGRPSVSK 226
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 42.7 bits (96), Expect = 0.010
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +3
Query: 267 GKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 446
G A VGN P MP GT++ +E G G+ ARA+G A + + +R L
Sbjct: 119 GPGAPTTVGNAPPPTHMPLGTVMHGIEVAPGKGGQSARAAGAPAKPVAKEGQSATSR--L 176
Query: 447 PSGAKKVLPSSNRGMVGIVAGVD 515
P G + +P + +VG VD
Sbjct: 177 PPGEVRSIPQNRPAVVGQAGNVD 199
Score = 39.9 bits (89), Expect = 0.067
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGG 637
P VRGV MNPV+HPHGGG
Sbjct: 218 PRVRGVVMNPVDHPHGGG 235
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 291 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 428
GN +P+ +P GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 212 GNCLPLHMIPVGTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
Score = 36.7 bits (81), Expect = 0.63
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 575 NCWPYVRGVAMNPVEHPHGGGNHQHIG 655
N P VRG+AMN +HPHGGG + G
Sbjct: 334 NIRPTVRGLAMNAADHPHGGGRGKSKG 360
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 670
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 199 PVVRGVAMNPVDHPHGGGQGKTSGGRPSV 227
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 42.3 bits (95), Expect = 0.013
Identities = 20/75 (26%), Positives = 41/75 (54%)
Frame = +3
Query: 282 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 461
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 462 KVLPSSNRGMVGIVA 506
+ + +G+V+
Sbjct: 280 RYISLDCHATLGVVS 294
Score = 37.5 bits (83), Expect = 0.36
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 536 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 637
KAGR +Y KR P VRG+AMN +HPHGGG
Sbjct: 305 KAGR--RRYLGKR---PVVRGMAMNAKDHPHGGG 333
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +2
Query: 572 RNCWPYVRGVAMNPVEHPHGGGNHQHIG 655
R P VRGVAMNPV+HPHGGG + G
Sbjct: 220 RGVRPTVRGVAMNPVDHPHGGGEGRTSG 247
Score = 37.5 bits (83), Expect = 0.36
Identities = 20/83 (24%), Positives = 45/83 (54%)
Frame = +3
Query: 258 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 437
+ G+ A ++VGN +P+ +P GT+V +E K G + AR++G ++ + +
Sbjct: 122 IVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLVA--KEGEYAT 179
Query: 438 VKLPSGAKKVLPSSNRGMVGIVA 506
+++ SG + + + + +G V+
Sbjct: 180 LRMRSGEMRKVLADCKATIGEVS 202
>UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 148
Score = 41.5 bits (93), Expect = 0.022
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +2
Query: 578 CW----PYVRGVAMNPVEHPHGGG 637
CW P VRGV MNPV+HPHGGG
Sbjct: 84 CWLGKRPVVRGVVMNPVDHPHGGG 107
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 41.5 bits (93), Expect = 0.022
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +2
Query: 518 IDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGG 634
I+K I K+ +A K + P VRG+AMNPV+HPHGG
Sbjct: 181 IEKKIKKSKKASESRK--KGIRPIVRGLAMNPVDHPHGG 217
Score = 37.5 bits (83), Expect = 0.36
Identities = 21/82 (25%), Positives = 43/82 (52%)
Frame = +3
Query: 270 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 449
K+ L+VG + +PEG ++ N+E +L+RA+G + +I + K + VKL
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGTSSLII-KQYNKKYSLVKLS 160
Query: 450 SGAKKVLPSSNRGMVGIVAGVD 515
S +++ + +G V+ ++
Sbjct: 161 SKECRLISNECYATIGTVSNIE 182
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 40.7 bits (91), Expect = 0.038
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2
Query: 2 GRVIRAQRKGAGSVFVSHTKKRK 70
GRVIRAQRKG GS+F SHT RK
Sbjct: 2 GRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8;
Aconoidasida|Rep: 50S ribosomal protein L2, putative -
Theileria annulata
Length = 334
Score = 40.3 bits (90), Expect = 0.051
Identities = 24/50 (48%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 503 CWG--GRIDKPILKAGRAYHKYKVKRNC-W-PYVRGVAMNPVEHPHGGGN 640
CW G+I I R K +RN W P VRG+AMN HPHGGGN
Sbjct: 235 CWATIGQISN-IKHNERILKKAGTRRNMGWRPVVRGIAMNANSHPHGGGN 283
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 39.5 bits (88), Expect = 0.089
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGG 634
P VRGVAMNPV+HPHGG
Sbjct: 220 PIVRGVAMNPVDHPHGG 236
Score = 36.3 bits (80), Expect = 0.83
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +3
Query: 315 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 494
+P GTI+ N+ + + +++GNFA +I D + ++KLPSG P ++ +
Sbjct: 137 IPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSGKIIKHPITSLATI 194
Query: 495 GIVA 506
G ++
Sbjct: 195 GSIS 198
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 39.5 bits (88), Expect = 0.089
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = -2
Query: 599 HHVHMASSYV*PCTCGMPFQLSK*VCQYVHPSNNTDHASVA*WQNLLGSRR*LYSCTLSI 420
HH+ +ASSY T L + SNNT++ SV WQN L +RR L + T +
Sbjct: 17 HHIPLASSYASSTT-----SLQDWLVDTTTASNNTNYGSVGRWQNFLDTRRQLVTGTHVL 71
Query: 419 RIVS--NHRGEVSR 384
R+ S N + +V R
Sbjct: 72 RLASCQNDQSQVVR 85
>UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 -
Babesia bovis
Length = 242
Score = 39.5 bits (88), Expect = 0.089
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 560 YKVKRNCWPYVRGVAMNPVEHPHGGG 637
YK+K P VRG AMN +HPHGGG
Sbjct: 188 YKIKLGRRPKVRGTAMNACDHPHGGG 213
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 39.1 bits (87), Expect = 0.12
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 655
G +++ + KAGR +++ KR P VRG+ MNPV+HP+GGG + G
Sbjct: 201 GEHMNRKLGKAGR--NRWLGKR---PRVRGMVMNPVDHPNGGGQGKSKG 244
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 39.1 bits (87), Expect = 0.12
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = -2
Query: 368 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINK 255
T++TH + +AHNGTL S R +I+N + L+TI++
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDE 44
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 39.1 bits (87), Expect = 0.12
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +3
Query: 291 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 467
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP +
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217
Query: 468 LPSSNRGMVGIVAGVDVLTNLF*KLEGH 551
L + VG ++ D+ +F + H
Sbjct: 218 LHRTCMATVGRLSHADIDGKIFGSAQMH 245
>UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymus
synuroideus|Rep: Ribosomal protein L2 - Chrysodidymus
synuroideus
Length = 262
Score = 38.7 bits (86), Expect = 0.16
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGG 634
P VRG+AMNPV+HPHGG
Sbjct: 220 PSVRGIAMNPVDHPHGG 236
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 38.7 bits (86), Expect = 0.16
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGGNHQH-IGKAS 664
P VRGVAMN +HPHGGG ++ IG++S
Sbjct: 213 PKVRGVAMNACDHPHGGGEGKNSIGRSS 240
Score = 33.9 bits (74), Expect = 4.4
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +3
Query: 258 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 437
+Y G+ L++GN++P+ +P G+ + N+E + S A +I K
Sbjct: 112 IYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKISAFLI--YIGKKYVT 169
Query: 438 VKLPSGAKKVL 470
+KLPSG ++L
Sbjct: 170 IKLPSGEIRLL 180
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 38.7 bits (86), Expect = 0.16
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 291 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 470
GN +P+ +P GT+V N+ +M R++G +AT+I + + K+ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1;
Medicago truncatula|Rep: Translation protein SH3-like -
Medicago truncatula (Barrel medic)
Length = 52
Score = 38.3 bits (85), Expect = 0.21
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +2
Query: 590 VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGL 706
VRGV MNPV+HPHGGG G+A K+ +GL
Sbjct: 11 VRGVVMNPVDHPHGGGE----GRAPIDKKKKKTLNSLGL 45
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 38.3 bits (85), Expect = 0.21
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 497 YCCWGG-RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAS 664
+C G I + + K + + + K + P +RG AMN V+HPHGGG GKAS
Sbjct: 180 FCILGQLEIRRKVNKNIKKHAGFNRKLSIRPKIRGAAMNAVDHPHGGGE----GKAS 232
Score = 36.3 bits (80), Expect = 0.83
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +3
Query: 267 GKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 446
G KA L++GN +P+ + G+ + N+E + +G L + + N +I D T VKL
Sbjct: 110 GFKAPLKIGNALPLYKILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIGDIYVT-VKL 167
Query: 447 PSGAKKVL 470
PSG K+L
Sbjct: 168 PSGEIKLL 175
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.27
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 291 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 407
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.27
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 270 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 413
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
Score = 37.5 bits (83), Expect = 0.36
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +2
Query: 563 KVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 655
K RN W P+VRG AMN V+H HGGG + G
Sbjct: 405 KAGRNRWLGRRPHVRGAAMNSVDHAHGGGRGKSKG 439
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 37.5 bits (83), Expect = 0.36
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = -2
Query: 494 DHASVA*WQNLLGSRR*LYSCTLSIRIVSNHRGEVSRGTCQTTSITHFLFKIAHNGTLRH 315
+H S + W NLL R L IR+V++ ++ + TSIT+ +F + GT
Sbjct: 68 NHCSASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGS 127
Query: 314 SSNRHHISNFKSCFLSTINK 255
+ ++ + FL+ N+
Sbjct: 128 RAQGQNVIGNEGGFLTAANE 147
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 37.5 bits (83), Expect = 0.36
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 291 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 452
G+ P+GA+P GT + LE+ G + L A+G F T++ D + V+LPS
Sbjct: 164 GDAYPLGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_Q8CM44 Cluster: DNA gyrase subunit A; n=4; Leptospira|Rep:
DNA gyrase subunit A - Leptospira interrogans
Length = 834
Score = 37.1 bits (82), Expect = 0.47
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 249 RPFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 428
RP+V C K +GN P G + + ++ R L GNF ++ G NP A
Sbjct: 85 RPYVKCAKIVGEVIGNYHPHGDASVYEALVRMVQEFSLRVPLIDGQGNFGSIDGDNPAAY 144
Query: 429 R-TRVKLPSGAKKVLPSSNRGMVGIVAGVD 515
R T +L A+++L + V D
Sbjct: 145 RYTEARLEKVAEELLRDIEKETVSFSPNYD 174
>UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5;
Tetrahymena|Rep: Ribosomal protein L2 - Tetrahymena
thermophila
Length = 262
Score = 37.1 bits (82), Expect = 0.47
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 590 VRGVAMNPVEHPHGG 634
VRGVAMNPV+HPHGG
Sbjct: 228 VRGVAMNPVDHPHGG 242
>UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 467
Score = 36.3 bits (80), Expect = 0.83
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGG 637
P VRGVAMN +HPHGGG
Sbjct: 400 PKVRGVAMNACDHPHGGG 417
>UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L2 - Paramecium tetraurelia
Length = 259
Score = 36.3 bits (80), Expect = 0.83
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGG 634
P VRGVAMNPV+HP+GG
Sbjct: 229 PRVRGVAMNPVDHPNGG 245
>UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2;
n=1; Nyctotherus ovalis|Rep: Hydrogenosomal 60S
ribosomal protein L2 - Nyctotherus ovalis
Length = 290
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 560 YKVKRNCWPYVRGVAMNPVEHPHGG 634
Y V R P VRG+ NPV+HP+GG
Sbjct: 249 YWVNRGIKPQVRGIVKNPVDHPNGG 273
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 368 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINK 255
T +TH + +AHNGTL S R +I+N + L+ +++
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDE 56
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 35.1 bits (77), Expect = 1.9
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 291 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 452
G+ P+GA+P GT + LE+ G L A+G F T++ ++ V+LPS
Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 34.7 bits (76), Expect = 2.5
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +3
Query: 291 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 470
G+ P+GA+P GT+V NLE + G RA+G ++ V+LPS + +
Sbjct: 130 GDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL--RKVNGTAIVQLPSKQQVQV 187
Query: 471 PSSNRGMVGIVAGVD 515
+ VG V+ VD
Sbjct: 188 LETCMVTVGRVSNVD 202
>UniRef50_Q7WEV5 Cluster: Rod shape-determining protein; n=4;
Bordetella|Rep: Rod shape-determining protein -
Bordetella bronchiseptica (Alcaligenes bronchisepticus)
Length = 187
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +1
Query: 451 LEPRRFCHQA--TEAWSVLLLGWTY*QTYFESWKGIPQVQGQT*LLAICTWCCHEPCR 618
+EP R A W +LL W + W G P V +L I WC HEP R
Sbjct: 20 VEPERLARPAHGVFVWGTVLLVWLLSLLPWRQWPGSPDVL----VLVIAFWCVHEPRR 73
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 255 FVYCGKKATLEVGNVMPVGAMPEG 326
FV C KKATL V NV+P+ + PEG
Sbjct: 53 FVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 34.3 bits (75), Expect = 3.3
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +3
Query: 291 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 470
G+ P+GA+P GT+V NLE + G RA+G ++ V+LPS + +
Sbjct: 164 GDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL--RKVNGTAIVQLPSKQQVQV 221
Query: 471 PSSNRGMVGIVAGVD 515
+ VG V+ +D
Sbjct: 222 LETCMVTVGRVSNID 236
>UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1;
Theileria parva|Rep: Ribosomal protein L2, putative -
Theileria parva
Length = 246
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 584 PYVRGVAMNPVEHPHGGGNHQ-HIGKAS 664
P VRG AMN +HPHGGG + IG+ S
Sbjct: 196 PKVRGSAMNACDHPHGGGEGKAPIGRRS 223
>UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2
protein - Plasmodium falciparum
Length = 245
Score = 34.3 bits (75), Expect = 3.3
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 560 YKVKRNCWPYVRGVAMNPVEHPHGGG 637
Y + N P VRG A N +HPHGGG
Sbjct: 194 YNIYYNIKPKVRGKAKNVCDHPHGGG 219
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 34.3 bits (75), Expect = 3.3
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +3
Query: 291 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 470
G+ P+GA+P GT++ N+E + G + RA+G ++ ++LPS + +
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQV 236
Query: 471 PSSNRGMVGIVAGVD 515
+ VG V+ VD
Sbjct: 237 LETCVATVGRVSNVD 251
>UniRef50_Q3IKS7 Cluster: Putative uncharacterized protein; n=2;
Alteromonadales|Rep: Putative uncharacterized protein -
Pseudoalteromonas haloplanktis (strain TAC 125)
Length = 352
Score = 33.9 bits (74), Expect = 4.4
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -1
Query: 465 PSWLQTVALLLYA*HQDCVQSPWRSFQRHVPDDLYHP---FSLQDCTQW 328
P LQ L YA + + Q+P R +Q+ PD HP F+ + TQW
Sbjct: 149 PYCLQIFETLSYAANSEFTQAPSRHYQKVAPDYAQHPEALFNYTETTQW 197
>UniRef50_A1SQS0 Cluster: Putative uncharacterized protein
precursor; n=1; Nocardioides sp. JS614|Rep: Putative
uncharacterized protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 400
Score = 33.5 bits (73), Expect = 5.8
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = -3
Query: 520 NTSTPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEA 380
N P +PT LD RT DG TL RLA+G+ T A A
Sbjct: 219 NEGGPDEVPTYRCRLDDRTVACTDGLTTLRRLAAGMHRFTAASVDPA 265
>UniRef50_Q17A88 Cluster: Sensory neuron membrane protein-1; n=3;
Culicidae|Rep: Sensory neuron membrane protein-1 - Aedes
aegypti (Yellowfever mosquito)
Length = 529
Score = 33.5 bits (73), Expect = 5.8
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 327 TIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP--SGAKKVLPSSNRGMVGI 500
T + N+ G A+ G TV+GH PD+K V P AK +L +S R + +
Sbjct: 452 TKMVNVTPVQSVNGSSAKGKGAGMTVVGHQPDSKGGSVTAPVIPSAKDLLQNS-RNLPTV 510
Query: 501 VAGVD 515
+ G+D
Sbjct: 511 IEGLD 515
>UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 348
Score = 33.1 bits (72), Expect = 7.7
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 336 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 470
C+L+E+M +RG L R+ N+ G PD R V+LP ++++
Sbjct: 297 CDLKERMAERGILLRSCANYD---GLGPDYYRAAVRLPEENERLI 338
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,576,113
Number of Sequences: 1657284
Number of extensions: 18699982
Number of successful extensions: 53258
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 50708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53210
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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