Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10538
(762 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 146 6e-35
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 146 6e-35
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 146 6e-35
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 146 8e-35
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 146 8e-35
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 146 8e-35
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 146 8e-35
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 146 8e-35
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 146 8e-35
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 131 2e-30
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 35 0.28
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 34 0.48
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 34 0.48
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 34 0.48
BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,... 31 4.5
AF283809-1|AAF87249.1| 54|Homo sapiens retinoic acid receptor ... 31 4.5
AL356755-3|CAI23466.1| 299|Homo sapiens GDNF family receptor al... 30 7.8
AJ291674-1|CAC19691.1| 299|Homo sapiens putative GDNF family re... 30 7.8
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 146 bits (355), Expect = 6e-35
Identities = 66/85 (77%), Positives = 76/85 (89%)
Frame = +3
Query: 255 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 434
FVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 435 RVKLPSGAKKVLPSSNRGMVGIVAG 509
RVKLPSG+KKV+ S+NR +VG+VAG
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVAG 171
Score = 137 bits (332), Expect = 3e-32
Identities = 63/80 (78%), Positives = 70/80 (87%)
Frame = +2
Query: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 181
GRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V
Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKV 61
Query: 182 HFRDPYKFKTRKELFIAPEG 241
FRDPY+FK R ELFIA EG
Sbjct: 62 VFRDPYRFKKRTELFIAAEG 81
Score = 136 bits (330), Expect = 6e-32
Identities = 60/69 (86%), Positives = 62/69 (89%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 689 GRKVGLIAA 715
GRKVGLIAA
Sbjct: 232 GRKVGLIAA 240
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 146 bits (355), Expect = 6e-35
Identities = 66/85 (77%), Positives = 76/85 (89%)
Frame = +3
Query: 255 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 434
FVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 435 RVKLPSGAKKVLPSSNRGMVGIVAG 509
RVKLPSG+KKV+ S+NR +VG+VAG
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVAG 171
Score = 137 bits (332), Expect = 3e-32
Identities = 63/80 (78%), Positives = 70/80 (87%)
Frame = +2
Query: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 181
GRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V
Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKV 61
Query: 182 HFRDPYKFKTRKELFIAPEG 241
FRDPY+FK R ELFIA EG
Sbjct: 62 VFRDPYRFKKRTELFIAAEG 81
Score = 136 bits (330), Expect = 6e-32
Identities = 60/69 (86%), Positives = 62/69 (89%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 689 GRKVGLIAA 715
GRKVGLIAA
Sbjct: 232 GRKVGLIAA 240
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 146 bits (355), Expect = 6e-35
Identities = 66/85 (77%), Positives = 76/85 (89%)
Frame = +3
Query: 255 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 434
FVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 435 RVKLPSGAKKVLPSSNRGMVGIVAG 509
RVKLPSG+KKV+ S+NR +VG+VAG
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVAG 171
Score = 137 bits (332), Expect = 3e-32
Identities = 63/80 (78%), Positives = 70/80 (87%)
Frame = +2
Query: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 181
GRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V
Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKV 61
Query: 182 HFRDPYKFKTRKELFIAPEG 241
FRDPY+FK R ELFIA EG
Sbjct: 62 VFRDPYRFKKRTELFIAAEG 81
Score = 136 bits (330), Expect = 6e-32
Identities = 60/69 (86%), Positives = 62/69 (89%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 689 GRKVGLIAA 715
GRKVGLIAA
Sbjct: 232 GRKVGLIAA 240
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 146 bits (354), Expect = 8e-35
Identities = 65/85 (76%), Positives = 76/85 (89%)
Frame = +3
Query: 255 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 434
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 435 RVKLPSGAKKVLPSSNRGMVGIVAG 509
RVKLPSG+KKV+ S+NR +VG+VAG
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVAG 171
Score = 137 bits (332), Expect = 3e-32
Identities = 63/80 (78%), Positives = 70/80 (87%)
Frame = +2
Query: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 181
GRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V
Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKV 61
Query: 182 HFRDPYKFKTRKELFIAPEG 241
FRDPY+FK R ELFIA EG
Sbjct: 62 VFRDPYRFKKRTELFIAAEG 81
Score = 136 bits (330), Expect = 6e-32
Identities = 60/69 (86%), Positives = 62/69 (89%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 689 GRKVGLIAA 715
GRKVGLIAA
Sbjct: 232 GRKVGLIAA 240
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 146 bits (354), Expect = 8e-35
Identities = 65/85 (76%), Positives = 76/85 (89%)
Frame = +3
Query: 255 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 434
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 435 RVKLPSGAKKVLPSSNRGMVGIVAG 509
RVKLPSG+KKV+ S+NR +VG+VAG
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVAG 171
Score = 137 bits (332), Expect = 3e-32
Identities = 63/80 (78%), Positives = 70/80 (87%)
Frame = +2
Query: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 181
GRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V
Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKV 61
Query: 182 HFRDPYKFKTRKELFIAPEG 241
FRDPY+FK R ELFIA EG
Sbjct: 62 VFRDPYRFKKRTELFIAAEG 81
Score = 136 bits (330), Expect = 6e-32
Identities = 60/69 (86%), Positives = 62/69 (89%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 689 GRKVGLIAA 715
GRKVGLIAA
Sbjct: 232 GRKVGLIAA 240
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 146 bits (354), Expect = 8e-35
Identities = 65/85 (76%), Positives = 76/85 (89%)
Frame = +3
Query: 255 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 434
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 435 RVKLPSGAKKVLPSSNRGMVGIVAG 509
RVKLPSG+KKV+ S+NR +VG+VAG
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVAG 171
Score = 137 bits (332), Expect = 3e-32
Identities = 63/80 (78%), Positives = 70/80 (87%)
Frame = +2
Query: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 181
GRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V
Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKV 61
Query: 182 HFRDPYKFKTRKELFIAPEG 241
FRDPY+FK R ELFIA EG
Sbjct: 62 VFRDPYRFKKRTELFIAAEG 81
Score = 136 bits (330), Expect = 6e-32
Identities = 60/69 (86%), Positives = 62/69 (89%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 689 GRKVGLIAA 715
GRKVGLIAA
Sbjct: 232 GRKVGLIAA 240
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 146 bits (354), Expect = 8e-35
Identities = 65/85 (76%), Positives = 76/85 (89%)
Frame = +3
Query: 255 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 434
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 435 RVKLPSGAKKVLPSSNRGMVGIVAG 509
RVKLPSG+KKV+ S+NR +VG+VAG
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVAG 171
Score = 137 bits (332), Expect = 3e-32
Identities = 63/80 (78%), Positives = 70/80 (87%)
Frame = +2
Query: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 181
GRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V
Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKV 61
Query: 182 HFRDPYKFKTRKELFIAPEG 241
FRDPY+FK R ELFIA EG
Sbjct: 62 VFRDPYRFKKRTELFIAAEG 81
Score = 136 bits (330), Expect = 6e-32
Identities = 60/69 (86%), Positives = 62/69 (89%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 689 GRKVGLIAA 715
GRKVGLIAA
Sbjct: 232 GRKVGLIAA 240
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 146 bits (354), Expect = 8e-35
Identities = 65/85 (76%), Positives = 76/85 (89%)
Frame = +3
Query: 255 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 434
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 41 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 100
Query: 435 RVKLPSGAKKVLPSSNRGMVGIVAG 509
RVKLPSG+KKV+ S+NR +VG+VAG
Sbjct: 101 RVKLPSGSKKVISSANRAVVGVVAG 125
Score = 136 bits (330), Expect = 6e-32
Identities = 60/69 (86%), Positives = 62/69 (89%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 126 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 185
Query: 689 GRKVGLIAA 715
GRKVGLIAA
Sbjct: 186 GRKVGLIAA 194
Score = 64.5 bits (150), Expect = 4e-10
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = +2
Query: 137 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 241
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG 35
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 146 bits (354), Expect = 8e-35
Identities = 65/85 (76%), Positives = 76/85 (89%)
Frame = +3
Query: 255 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 434
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 435 RVKLPSGAKKVLPSSNRGMVGIVAG 509
RVKLPSG+KKV+ S+NR +VG+VAG
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVAG 171
Score = 137 bits (332), Expect = 3e-32
Identities = 63/80 (78%), Positives = 70/80 (87%)
Frame = +2
Query: 2 GRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 181
GRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V
Sbjct: 2 GRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKV 61
Query: 182 HFRDPYKFKTRKELFIAPEG 241
FRDPY+FK R ELFIA EG
Sbjct: 62 VFRDPYRFKKRTELFIAAEG 81
Score = 136 bits (330), Expect = 6e-32
Identities = 60/69 (86%), Positives = 62/69 (89%)
Frame = +2
Query: 509 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 688
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 689 GRKVGLIAA 715
GRKVGLIAA
Sbjct: 232 GRKVGLIAA 240
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 131 bits (317), Expect = 2e-30
Identities = 60/77 (77%), Positives = 67/77 (87%)
Frame = +2
Query: 11 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 190
IR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 191 DPYKFKTRKELFIAPEG 241
DPY+FK R ELFIA EG
Sbjct: 61 DPYRFKKRTELFIAAEG 77
Score = 89.0 bits (211), Expect = 2e-17
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +3
Query: 255 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 398
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 83 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 35.1 bits (77), Expect = 0.28
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +3
Query: 291 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 470
G+ P+GA+P GT++ N+E + G + RA+G ++ + ++LPS + +
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGHSIIQLPSKRQMQV 236
Query: 471 PSSNRGMVGIVAGVD 515
+ VG V+ VD
Sbjct: 237 LETCVATVGRVSNVD 251
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.48
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +3
Query: 291 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 470
G+ P+GA+P GT++ N+E + G + RA+G ++ ++LPS + +
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQV 236
Query: 471 PSSNRGMVGIVAGVD 515
+ VG V+ VD
Sbjct: 237 LETCVATVGRVSNVD 251
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.48
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +3
Query: 291 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 470
G+ P+GA+P GT++ N+E + G + RA+G ++ ++LPS + +
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQV 236
Query: 471 PSSNRGMVGIVAGVD 515
+ VG V+ VD
Sbjct: 237 LETCVATVGRVSNVD 251
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 34.3 bits (75), Expect = 0.48
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +3
Query: 291 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 470
G+ P+GA+P GT++ N+E + G + RA+G ++ ++LPS + +
Sbjct: 176 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQV 233
Query: 471 PSSNRGMVGIVAGVD 515
+ VG V+ VD
Sbjct: 234 LETCVATVGRVSNVD 248
>BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,
alpha protein.
Length = 457
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 246 VEPSGAMKSSFLVLNLYG-SRKCTTA-KGAPLPGSWIISLTTPL 121
VE G + FLV++ Y +R C KG P PG + L TPL
Sbjct: 5 VEVGGPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLRTPL 48
>AF283809-1|AAF87249.1| 54|Homo sapiens retinoic acid receptor
alpha 2 isoform protein.
Length = 54
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 246 VEPSGAMKSSFLVLNLYG-SRKCTTA-KGAPLPGSWIISLTTPL 121
VE G + FLV++ Y +R C KG P PG + L TPL
Sbjct: 5 VEVGGPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLRTPL 48
>AL356755-3|CAI23466.1| 299|Homo sapiens GDNF family receptor alpha
4 protein.
Length = 299
Score = 30.3 bits (65), Expect = 7.8
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 414 NPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGVDVLTN 527
+P A+R R +LP+G + LP+ RG G+ AG V N
Sbjct: 168 HPSAQRPR-RLPAGPGRPLPARLRGPRGVPAGTAVTPN 204
>AJ291674-1|CAC19691.1| 299|Homo sapiens putative GDNF family
receptor alpha 4, GPI anchored isoform b protein.
Length = 299
Score = 30.3 bits (65), Expect = 7.8
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 414 NPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGVDVLTN 527
+P A+R R +LP+G + LP+ RG G+ AG V N
Sbjct: 168 HPSAQRPR-RLPAGPGRPLPARLRGPRGVPAGTAVTPN 204
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,068,399
Number of Sequences: 237096
Number of extensions: 3081230
Number of successful extensions: 6427
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6427
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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