Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10537
         (596 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   2.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   4.5  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.5  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   7.9  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 222 DLSIHRDRESDFVLYYVVGGFKTIST 145
           +++I  DRE+  + +YVV    T S+
Sbjct: 223 EVAIKEDREAGLIPFYVVATLGTTSS 248


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 47  FVLTIKLLSIAPTIHLHYNIDARPSSGTTRHRSV 148
           F L++ +   A + H H+++ ARP   +    SV
Sbjct: 39  FPLSLGMSPYASSQHHHHHLQARPPQDSPYDASV 72


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 19  VKENFIEGMFRVNYKTIIDCSY 84
           V  +FI+  FR+ YK ++  SY
Sbjct: 126 VDVSFIKAGFRLEYKQLLKRSY 147


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 19  VKENFIEGMFRVNYKTIIDCSY 84
           V  +FI+  FR+ YK ++  SY
Sbjct: 126 VDVSFIKAGFRLEYKQLLKRSY 147


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 258 LIDRVIEEEGLYV**HPLNSGEINNKLQFPKPSEG 362
           LIDR  +E   Y   + L  G  NNKL    P+ G
Sbjct: 259 LIDRKYDENVDYQVRYWLQKGAPNNKLILGIPAYG 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,316
Number of Sequences: 336
Number of extensions: 2993
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)