Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10537
         (596 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067942-13|AAG45577.2|  386|Caenorhabditis elegans Hypothetical...    30   1.4  
AF067942-12|AAT68887.1|  385|Caenorhabditis elegans Hypothetical...    30   1.4  
Z77136-3|CAB00886.1|  252|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z75550-9|CAE54924.1| 1291|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z75550-8|CAA99926.1| 1307|Caenorhabditis elegans Hypothetical pr...    28   5.8  

>AF067942-13|AAG45577.2|  386|Caenorhabditis elegans Hypothetical
           protein ZK6.11a protein.
          Length = 386

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 300 IIHINLPLQSLYLLKKPHQ-NPLRSFKDLSIHRDRESDFVLY 178
           I  + L L +L+L+    Q  PL SFK +S+H +  SDF +Y
Sbjct: 3   IFTVFLTLSALFLVGSAQQLQPLSSFKGMSVHNE-FSDFKVY 43


>AF067942-12|AAT68887.1|  385|Caenorhabditis elegans Hypothetical
           protein ZK6.11b protein.
          Length = 385

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 300 IIHINLPLQSLYLLKKPHQ-NPLRSFKDLSIHRDRESDFVLY 178
           I  + L L +L+L+    Q  PL SFK +S+H +  SDF +Y
Sbjct: 3   IFTVFLTLSALFLVGSAQQLQPLSSFKGMSVHNE-FSDFKVY 43


>Z77136-3|CAB00886.1|  252|Caenorhabditis elegans Hypothetical
           protein ZC376.4 protein.
          Length = 252

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +2

Query: 350 AKRGRVTSYSTYIPVRRVR*DSLKNNVEVFNNITFKMCSVLS*LENILENSVVTGERPPV 529
           +KRGRVT    Y        D  ++++E  +N  F+M  V S  + + +   V  E PPV
Sbjct: 85  SKRGRVTCGLDYKNHEEESTDDFQDDIEELDNSQFEMAKVSSIRDELKD---VKSESPPV 141


>Z75550-9|CAE54924.1| 1291|Caenorhabditis elegans Hypothetical
           protein T22C1.10b protein.
          Length = 1291

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = -3

Query: 219 LSIHRDRESDFVLYYVVGGFKT----ISTERCRVVPLDGRASIL*CRCMVGAIDNSFIVN 52
           L+I   R S   ++ V+G  +     + +  C VV   G   +L  RC V    NSF ++
Sbjct: 418 LTIFAPRRSLLEVWTVLGNVRVCAQHVPSSECNVVT-GGENKMLCGRCHVHTDSNSFFID 476

Query: 51  TKHTFNKI 28
            K  F++I
Sbjct: 477 EKGEFHRI 484


>Z75550-8|CAA99926.1| 1307|Caenorhabditis elegans Hypothetical
           protein T22C1.10a protein.
          Length = 1307

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = -3

Query: 219 LSIHRDRESDFVLYYVVGGFKT----ISTERCRVVPLDGRASIL*CRCMVGAIDNSFIVN 52
           L+I   R S   ++ V+G  +     + +  C VV   G   +L  RC V    NSF ++
Sbjct: 434 LTIFAPRRSLLEVWTVLGNVRVCAQHVPSSECNVVT-GGENKMLCGRCHVHTDSNSFFID 492

Query: 51  TKHTFNKI 28
            K  F++I
Sbjct: 493 EKGEFHRI 500


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,833,935
Number of Sequences: 27780
Number of extensions: 267622
Number of successful extensions: 496
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)