Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10535
         (554 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.19 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.1  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   3.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -1

Query: 545 FFFCVKQNHNYTFDYTINGLRCCYLIIVGMHFLQFWVLDNVTL 417
           F  C+         +T++ L CC  I   MH L    LD  TL
Sbjct: 162 FLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTL 204



 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 503 YTINGLRCCYLIIVGMHFL 447
           Y ++ L CC  II  MH L
Sbjct: 262 YYMHLLFCCAFIIFTMHLL 280


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 492  WIKVLLFDYRGH 457
            WI V+ +D+ GH
Sbjct: 2507 WIAVMTYDFHGH 2518



 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 492  WIKVLLFDYRG 460
            WI V+ +DY G
Sbjct: 2009 WIAVMCYDYHG 2019


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 284 VNDQYKRLG*PRREQILPTLSGSTTLVPNDLVA 186
           ++++  RL    R  +   L+G  TLV ND+VA
Sbjct: 214 ISEKIVRLEAVWRSGVFAPLTGVGTLVVNDVVA 246


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 255 TKEGADFTYFIRVHDFSTQRPCC 187
           T  GA  TY   ++ F   +P C
Sbjct: 646 TVVGAATTYITIIYQFQVNKPTC 668


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,756
Number of Sequences: 336
Number of extensions: 2998
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)