Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10533X
(568 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 133 8e-32
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 56 2e-08
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 55 3e-08
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 51 7e-07
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 46 2e-05
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 40 0.001
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 39 0.002
11_06_0178 + 20942757-20942801,20943790-20943867,20943930-209440... 36 0.030
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 34 0.091
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 32 0.28
05_03_0425 - 13808840-13809414,13809552-13809765,13810268-138113... 30 1.5
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156... 30 1.5
12_01_0063 - 535364-536085,536226-536439,536989-537981,538238-53... 29 2.0
01_06_1818 - 40093327-40093384,40093501-40093580,40093661-400939... 29 2.6
06_01_0905 - 6974369-6974456,6974647-6974777 29 3.4
11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-45... 28 4.5
06_03_0103 + 16678371-16678577,16678750-16679517 28 6.0
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 133 bits (322), Expect = 8e-32
Identities = 63/85 (74%), Positives = 72/85 (84%)
Frame = +1
Query: 1 EKLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEGIIGLRRA 180
EK+VAAER +D+RV++I+ LK K+C G DK FVVINQKGIDP SLD A+ GIIGLRRA
Sbjct: 276 EKMVAAERRQVDERVKRIIELKNKVCAGNDKNFVVINQKGIDPPSLDLLARAGIIGLRRA 335
Query: 181 KRRNMERLALACGGSAVNSVDDLTE 255
KRRNMERL LACGG AV+SVDDLTE
Sbjct: 336 KRRNMERLVLACGGEAVDSVDDLTE 360
Score = 123 bits (297), Expect = 9e-29
Identities = 57/95 (60%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +3
Query: 255 DALGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNA 434
D LG+AGLVYEH LGE+K+TF+E KNP+S TILIKGPN HT+ QIKDAVRDGLR++ N
Sbjct: 361 DCLGWAGLVYEHTLGEEKYTFIENVKNPRSCTILIKGPNDHTIAQIKDAVRDGLRSVKNT 420
Query: 435 IEDKCVIPGAAAFEIKANTELL-KYKTLLKARLVL 536
+ED+ V+ GA AFE+ A L+ K +K R L
Sbjct: 421 VEDEAVVLGAGAFEVAAKKHLIDNVKKTVKGRAQL 455
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/19 (68%), Positives = 19/19 (100%)
Frame = +2
Query: 512 TVKGKARLGIQAYAEALLV 568
TVKG+A+LG++A+A+ALLV
Sbjct: 448 TVKGRAQLGVEAFADALLV 466
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 56.0 bits (129), Expect = 2e-08
Identities = 22/76 (28%), Positives = 46/76 (60%)
Frame = +3
Query: 270 AGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKC 449
AGL +G++ FTF+ CK+P++ T+L++G +K L +++ ++D + N +++
Sbjct: 349 AGLFEVKKIGDEFFTFIVDCKDPKACTVLLRGASKDVLNEVERNLQDAMSVARNILKNPK 408
Query: 450 VIPGAAAFEIKANTEL 497
++PG A E+ + L
Sbjct: 409 LLPGGGATELTVSAAL 424
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = +1
Query: 91 KTFVVINQKGIDPLSLDAFAKEGIIGLRRAKRRNMERLALACGGSAVNSVDDLTET 258
K +V+ +KG+ L++ +K G+ +RR ++ + R+A ACG VN ++L E+
Sbjct: 288 KPDLVVTEKGLSDLAIHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPEELQES 343
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 55.2 bits (127), Expect = 3e-08
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +3
Query: 255 DALGFAGLVYEHVLG--EDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAIN 428
+ LG AG+V E G +D+ ++EQC N ++VTI I+G NK + + K ++ D L
Sbjct: 347 EKLGKAGIVREKSFGTTKDRMLYIEQCANSRAVTIFIRGGNKMMIEETKRSLHDALCVAR 406
Query: 429 NAIEDKCVIPGAAAFEIKAN 488
N I + ++ G + EI +
Sbjct: 407 NLIRNNSIVYGGGSAEISCS 426
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 50.8 bits (116), Expect = 7e-07
Identities = 21/76 (27%), Positives = 43/76 (56%)
Frame = +3
Query: 270 AGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKC 449
AGL G++ F F+ CK+P++ T+L++G +K L +++ ++D + N ++
Sbjct: 349 AGLFEVKKFGDEFFAFIVDCKDPKACTVLLRGASKDVLNEVERNLQDAMSMARNIWKNPK 408
Query: 450 VIPGAAAFEIKANTEL 497
++PG A E+ + L
Sbjct: 409 LLPGGGATELTVSATL 424
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +1
Query: 91 KTFVVINQKGIDPLSLDAFAKEGIIGLRRAKRRNMERLALACGGSAVNSVDDLTET 258
K +VI +KG+ L++ K G+ +RR ++ + R+A ACG VN ++L E+
Sbjct: 288 KPDLVITEKGLSDLAVHYLGKAGVSAIRRLRKTDNNRIAKACGAVIVNRPEELQES 343
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 DALGFAGLVYEHVLGEDKFTFVEQCKNPQSV-TILIKGPNKHTLTQIKDAVRDGLRAINN 431
D LG+A V +G + T V+ + SV T++++G L ++ AV DG+ +
Sbjct: 340 DELGYADSVSVEEIGGARVTVVKNEEGGNSVATVVLRGSTDSILDDLERAVDDGVNTYKS 399
Query: 432 AIEDKCVIPGAAAFEIKANTELLKY 506
D +IPGAAA EI+ L ++
Sbjct: 400 MCRDSRIIPGAAATEIELARRLKEF 424
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/67 (26%), Positives = 36/67 (53%)
Frame = +3
Query: 261 LGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIE 440
LG ++ E ++GEDK Q+ TI+++G ++H L + + ++ D L ++ +
Sbjct: 336 LGHCNVIEEIMIGEDKLIHFSGVAMGQACTIVLRGASEHVLDEAERSLHDALCVLSQTVN 395
Query: 441 DKCVIPG 461
D V+ G
Sbjct: 396 DTRVLFG 402
Score = 31.5 bits (68), Expect = 0.48
Identities = 22/81 (27%), Positives = 42/81 (51%)
Frame = +1
Query: 4 KLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEGIIGLRRAK 183
++ AAE++ + ++V+KI+ G + +N++ I + FA GI+ + A
Sbjct: 259 EIEAAEKQKMREKVQKIIG------HGIN---CFVNRQLIYNFPEELFADAGILAIEHAD 309
Query: 184 RRNMERLALACGGSAVNSVDD 246
+ERLAL GG ++ D+
Sbjct: 310 FEGIERLALVTGGDIASTFDN 330
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/67 (25%), Positives = 37/67 (55%)
Frame = +3
Query: 261 LGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIE 440
LG ++ E ++GED+ + Q+ TI+++G ++H L + + ++ D L ++ +
Sbjct: 313 LGHCKVIEEIMIGEDRLIHFSGVEMGQACTIVLRGASEHVLDEAERSLHDALCVLSQTVN 372
Query: 441 DKCVIPG 461
D V+ G
Sbjct: 373 DTRVLYG 379
Score = 31.5 bits (68), Expect = 0.48
Identities = 22/81 (27%), Positives = 42/81 (51%)
Frame = +1
Query: 4 KLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEGIIGLRRAK 183
++ AAE++ + ++V+KI+ G + +N++ I + FA GI+ + A
Sbjct: 236 EIEAAEKQKMREKVQKIIG------HGIN---CFVNRQLIYNFPEELFADAGILAIEHAD 286
Query: 184 RRNMERLALACGGSAVNSVDD 246
+ERLAL GG ++ D+
Sbjct: 287 FEGIERLALVTGGDIASTFDN 307
>11_06_0178 +
20942757-20942801,20943790-20943867,20943930-20944025,
20944114-20944221,20944322-20944420
Length = 141
Score = 35.5 bits (78), Expect = 0.030
Identities = 25/84 (29%), Positives = 41/84 (48%)
Frame = +3
Query: 255 DALGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNA 434
D LG+A V +G + E+ +N ++ +L +G L + AV DG+ +
Sbjct: 56 DELGYADSVSLEDIGGVRN---EEGRNSVAIAVL-RGSTDSILDDLGRAVDDGVNTYKSM 111
Query: 435 IEDKCVIPGAAAFEIKANTELLKY 506
D +IPGAAA EI+ L ++
Sbjct: 112 CRDSRIIPGAAATEIELAKRLKEF 135
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 33.9 bits (74), Expect = 0.091
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 DALGFAGLVYEHVLGEDKFTFVEQCKN-PQSVTILIKGPNKHTLTQIKDAVRDGLRAI 425
D LG+A LV E +GE K + K+ ++ T+L++G N+ + + + ++ D L I
Sbjct: 350 DKLGYADLVEEVSVGESKIVKIMGIKDMGRTATVLVRGSNQLVIDEAERSLHDALCVI 407
>08_02_0864 +
21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 32.3 bits (70), Expect = 0.28
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 315 FVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGL-RAINNAIEDKCVI-PGAAAFEIKAN 488
F E C P TIL+KG N L ++K V+ G+ A + A+E ++ GA E+
Sbjct: 624 FFEGCPKPLGCTILLKGANGDELKKVKHVVQYGVFAAYHLALETSFLVDEGATLPELPLK 683
Query: 489 TELL 500
+ ++
Sbjct: 684 SPII 687
>05_03_0425 -
13808840-13809414,13809552-13809765,13810268-13811317,
13811616-13811687,13812075-13812334,13812647-13812731
Length = 751
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 508 LYFSSSVLALISKAAAPGMT--HLSSMALLIARRPSRTASLICVKVCLL 368
L F+ VL L + + +P T H+ + L A RP+ A L+C LL
Sbjct: 208 LRFAPKVLLLAAPSVSPNATSFHILTSTLCQAHRPTAAADLLCCMPSLL 256
>03_03_0266 -
16014740-16015045,16015566-16015601,16015623-16015643,
16016331-16016591,16017504-16018985,16019834-16019989,
16020154-16020277,16020399-16020615,16020877-16021774,
16022947-16023291,16023371-16023565,16023751-16024453,
16024866-16025467
Length = 1781
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 315 FVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRA 422
F E C P T+L+KG + L +IK V+ G+ A
Sbjct: 604 FFEGCPKPLGCTVLLKGGSMDELKKIKHVVQYGIFA 639
>12_01_0063 - 535364-536085,536226-536439,536989-537981,538238-538255,
538601-538860,539950-540073,540978-541310,541447-541531,
541683-541768,541843-541941,542041-542180,542717-543043,
543163-543774,543887-543971,543972-544067,544147-544500,
544536-544559,544597-544707,544811-544894,545468-545546,
546122-546279,546412-546528,546622-546780,546857-546939,
547525-547627,549184-549495
Length = 1925
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 508 LYFSSSVLALISKAAAPGMT--HLSSMALLIARRPSRTASLICVKVCLL 368
L F+ VL L + + +P T H+ + L A RP+ A L+C LL
Sbjct: 1352 LRFAPKVLLLAAPSVSPDATTFHILTSTLCQAHRPAAAADLLCCMPSLL 1400
>01_06_1818 -
40093327-40093384,40093501-40093580,40093661-40093946,
40095007-40095291,40095386-40095513,40095625-40096560,
40096650-40096712,40096801-40096854,40096963-40097139,
40097452-40097583,40097666-40097785,40097935-40098627,
40098760-40099158,40099263-40099271
Length = 1139
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 318 VEQCKNPQSVTILIKGPNK-HTLTQIKDAVR-DGLR 419
VE C NP V+ IK PNK T+ ++++ VR GLR
Sbjct: 844 VESC-NPHCVSFFIKDPNKVRTIDEMRERVRMRGLR 878
>06_01_0905 - 6974369-6974456,6974647-6974777
Length = 72
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 104 LSTKKESTPCHWMLLP 151
+S KKES+P HW +LP
Sbjct: 56 ISGKKESSPLHWKILP 71
>11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-459581,
459924-460183,461834-461918,462587-462919,463053-463137,
463289-463374,463455-463556,463656-463795,464332-464658,
464778-465389,465502-465586,465587-465682,465762-466115,
466212-466322,466426-466509,467086-467164,467742-467899,
468034-468150,468240-468398,468475-468557,469098-469200,
470784-471080
Length = 1899
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -1
Query: 508 LYFSSSVLALISKAAAPGMT--HLSSMALLIARRPSRTASLICVKVCLL 368
L F+ VL L + + +P T H+ L A RP+ A L+C LL
Sbjct: 1327 LRFAPKVLLLAAPSVSPDATTFHILISTLCQAHRPAAAADLLCCMPSLL 1375
>06_03_0103 + 16678371-16678577,16678750-16679517
Length = 324
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 394 LICVKVCLLGPLMRM-VTDCGFLHCSTKVNLSSPSTCS*TRPAKPKAS 254
+I L GPL+R+ DC C V LSS + R AKP S
Sbjct: 47 IIAAAPSLAGPLLRLHFHDCFVRGCDASVLLSSAGGNTAERDAKPNKS 94
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,940,940
Number of Sequences: 37544
Number of extensions: 296824
Number of successful extensions: 806
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -