Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10533X
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 129 2e-30
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 119 2e-27
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 59 2e-09
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 48 5e-06
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 48 5e-06
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 48 5e-06
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 41 7e-04
U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 29 1.8
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 29 1.8
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 29 1.8
U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w... 29 3.1
Z78542-3|CAB01745.2| 463|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 27 7.1
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 27 7.1
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 27 9.4
U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical p... 27 9.4
AF143149-1|AAD37915.1| 260|Caenorhabditis elegans R151.8B prote... 27 9.4
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 27 9.4
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 129 bits (311), Expect = 2e-30
Identities = 61/92 (66%), Positives = 73/92 (79%)
Frame = +3
Query: 261 LGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIE 440
LG+AGLVYEH LGE+K+TF+E+C+ P+SVT+LIKGPNKHT+TQIKDA+ DGLRA+ N I
Sbjct: 348 LGWAGLVYEHSLGEEKYTFIEECRAPKSVTLLIKGPNKHTITQIKDAIHDGLRAVFNTIV 407
Query: 441 DKCVIPGAAAFEIKANTELLKYKTLLKARLVL 536
DK V+PGAAAFEI A L K LK R L
Sbjct: 408 DKAVLPGAAAFEIAAYVMLKKDVENLKGRAKL 439
Score = 119 bits (286), Expect = 2e-27
Identities = 63/88 (71%), Positives = 69/88 (78%), Gaps = 4/88 (4%)
Frame = +1
Query: 1 EKLVAAEREFIDQRVRKIVALKKKLCD----GTDKTFVVINQKGIDPLSLDAFAKEGIIG 168
E L+AAEREFI +RV KI+ LKKK+ D G +K FVVINQKGIDP SLD A EGI+
Sbjct: 257 EALLAAEREFITRRVHKIIELKKKVIDNSPDGKNKGFVVINQKGIDPPSLDLLASEGILA 316
Query: 169 LRRAKRRNMERLALACGGSAVNSVDDLT 252
LRRAKRRNMERL LA GG AVNSVDDLT
Sbjct: 317 LRRAKRRNMERLQLAVGGEAVNSVDDLT 344
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +2
Query: 509 DTVKGKARLGIQAYAEALLV 568
+ +KG+A+LG +A+A+ALLV
Sbjct: 431 ENLKGRAKLGAEAFAQALLV 450
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 119 bits (286), Expect = 2e-27
Identities = 63/88 (71%), Positives = 69/88 (78%), Gaps = 4/88 (4%)
Frame = +1
Query: 1 EKLVAAEREFIDQRVRKIVALKKKLCD----GTDKTFVVINQKGIDPLSLDAFAKEGIIG 168
E L+AAEREFI +RV KI+ LKKK+ D G +K FVVINQKGIDP SLD A EGI+
Sbjct: 257 EALLAAEREFITRRVHKIIELKKKVIDNSPDGKNKGFVVINQKGIDPPSLDLLASEGILA 316
Query: 169 LRRAKRRNMERLALACGGSAVNSVDDLT 252
LRRAKRRNMERL LA GG AVNSVDDLT
Sbjct: 317 LRRAKRRNMERLQLAVGGEAVNSVDDLT 344
Score = 107 bits (257), Expect = 5e-24
Identities = 45/63 (71%), Positives = 56/63 (88%)
Frame = +3
Query: 261 LGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIE 440
LG+AGLVYEH LGE+K+TF+E+C+ P+SVT+LIKGPNKHT+TQIKDA+ DGLRA+ N I
Sbjct: 348 LGWAGLVYEHSLGEEKYTFIEECRAPKSVTLLIKGPNKHTITQIKDAIHDGLRAVFNTIV 407
Query: 441 DKC 449
D C
Sbjct: 408 DSC 410
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +3
Query: 255 DALGFAGLVYEHVLG--EDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAIN 428
+ LG AGLV E G +D+ +EQC N ++VTI ++G NK + + K A+ D L I
Sbjct: 350 EKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIR 409
Query: 429 NAIEDKCVIPGAAAFEIKANTELLK 503
N + D ++ G + E+ A ++ K
Sbjct: 410 NLVRDSRIVYGGGSAELAAAIQVAK 434
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +3
Query: 255 DALGFAGLVYEHVLG--EDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAIN 428
+ LG AGLV E G +D+ +EQC N ++VTI ++G NK + + K A+ D L I
Sbjct: 350 EKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIR 409
Query: 429 NAIEDKCVIPGAAAFEIKANTELLK 503
N + D ++ G + E+ A ++ K
Sbjct: 410 NLVRDSRIVYGGGSAELAAAIQVAK 434
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +3
Query: 255 DALGFAGLVYEHVLG--EDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAIN 428
+ LG AGLV E G +D+ +EQC N ++VTI ++G NK + + K A+ D L I
Sbjct: 144 EKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIR 203
Query: 429 NAIEDKCVIPGAAAFEIKANTELLK 503
N + D ++ G + E+ A ++ K
Sbjct: 204 NLVRDSRIVYGGGSAELAAAIQVAK 228
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +3
Query: 255 DALGFAGLVYEHVLG--EDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAIN 428
+ LG AGLV E G +D+ +EQC N ++VTI ++G NK + + K A+ D L I
Sbjct: 350 EKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIR 409
Query: 429 NAIEDKCVIPGAAAFEIKANTELLK 503
N + D ++ G + E+ A ++ K
Sbjct: 410 NLVRDSRIVYGGGSAELAAAIQVAK 434
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 48.0 bits (109), Expect = 5e-06
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +3
Query: 255 DALGFAGLVYEHVLGED-KFTFVEQCKNP-QSVTILIKGPNKHTLTQIKDAVRDGLRAIN 428
DALG+A LV E G D K V +NP +V+IL++G NK L + ++ D L I
Sbjct: 354 DALGYADLVEEIPTGGDGKVIKVTGVQNPGHAVSILLRGSNKLVLEEADRSIHDALCVIR 413
Query: 429 NAIEDKCVIPGAAAFEIKANTEL 497
++ K ++PG A E++ +L
Sbjct: 414 CLVKKKALLPGGGAPEMEIAVKL 436
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 48.0 bits (109), Expect = 5e-06
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +3
Query: 255 DALGFAGLVYEHVLGED-KFTFVEQCKNP-QSVTILIKGPNKHTLTQIKDAVRDGLRAIN 428
DALG+A LV E G D K V +NP +V+IL++G NK L + ++ D L I
Sbjct: 354 DALGYADLVEEIPTGGDGKVIKVTGVQNPGHAVSILLRGSNKLVLEEADRSIHDALCVIR 413
Query: 429 NAIEDKCVIPGAAAFEIKANTEL 497
++ K ++PG A E++ +L
Sbjct: 414 CLVKKKALLPGGGAPEMEIAVKL 436
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 48.0 bits (109), Expect = 5e-06
Identities = 18/74 (24%), Positives = 40/74 (54%)
Frame = +3
Query: 261 LGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIE 440
LG G YE +G +++ F E C Q+ T+L++G + + + + ++ D + + A +
Sbjct: 340 LGKCGKFYEQQVGSERYNFFEDCSKAQACTLLLRGGAEQFIAETERSLHDAIMIVRRAKK 399
Query: 441 DKCVIPGAAAFEIK 482
+ ++ G A E++
Sbjct: 400 NDSIVAGGGAIEME 413
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 48.0 bits (109), Expect = 5e-06
Identities = 18/74 (24%), Positives = 40/74 (54%)
Frame = +3
Query: 261 LGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIE 440
LG G YE +G +++ F E C Q+ T+L++G + + + + ++ D + + A +
Sbjct: 340 LGKCGKFYEQQVGSERYNFFEDCSKAQACTLLLRGGAEQFIAETERSLHDAIMIVRRAKK 399
Query: 441 DKCVIPGAAAFEIK 482
+ ++ G A E++
Sbjct: 400 NDSIVAGGGAIEME 413
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 40.7 bits (91), Expect = 7e-04
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 KKLCDGTDKTF--VVINQKGIDPLSLDAFAKEGIIGLRRAKRRNMERLALACGGSAVNSV 240
+K CD K +V +KGI L+ K GI LRR K+ + RLA CG V+
Sbjct: 279 RKQCDEIIKLKPDLVFTEKGISDLAQHFLLKAGITCLRRLKKTDNNRLARVCGARVVHDT 338
Query: 241 DDLTE 255
DL +
Sbjct: 339 SDLRD 343
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/80 (21%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +3
Query: 261 LGFAGLVYEHV-LGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAI 437
+G ++E V + ++ +T+V + + T++++GP+K + +++ ++D L + N +
Sbjct: 346 VGTKAQLFEVVKIADEYYTYVT-AETTTACTVVLRGPSKDVINEVERNLQDSLHVVRNIM 404
Query: 438 EDKCVIPGAAAFEIKANTEL 497
+ ++PG A E+ + E+
Sbjct: 405 INPKLVPGGGALEMALSREI 424
>U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical protein
R02F2.2 protein.
Length = 1182
Score = 30.3 bits (65), Expect = 1.0
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = -1
Query: 541 DSKTSLAFNSVLYFSSSVLALISKAAAPGMTHLSSMALLIARRPSRTASL-ICVKVCLLG 365
D+K +LA N + S S+ +I+ PG+ L + ++ +R T SL +C G
Sbjct: 746 DAKATLAKNLLAAPSCSLKTIIAHQTRPGL-QLCTATVVPGKRVDSTPSLWVCASDKFSG 804
Query: 364 PLMRMVTDCGFL---HCSTKVNLSSPSTCS*TRPAK 266
+ M D G + CS N + + C+ P K
Sbjct: 805 QVAVMALDTGEITIESCSAIGNAAVTAMCTVPPPMK 840
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/80 (31%), Positives = 40/80 (50%)
Frame = +1
Query: 4 KLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEGIIGLRRAK 183
+L AAE+ + ++V KI+A C+ V IN++ I FA ++ + A
Sbjct: 260 ELEAAEKLKMKEKVDKILAHN---CN------VFINRQLIYNYPEQLFADAKVMAIEHAD 310
Query: 184 RRNMERLALACGGSAVNSVD 243
+ERLAL GG V++ D
Sbjct: 311 FEGIERLALVLGGEIVSTFD 330
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/80 (31%), Positives = 40/80 (50%)
Frame = +1
Query: 4 KLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEGIIGLRRAK 183
+L AAE+ + ++V KI+A C+ V IN++ I FA ++ + A
Sbjct: 260 ELEAAEKLKMKEKVDKILAHN---CN------VFINRQLIYNYPEQLFADAKVMAIEHAD 310
Query: 184 RRNMERLALACGGSAVNSVD 243
+ERLAL GG V++ D
Sbjct: 311 FEGIERLALVLGGEIVSTFD 330
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/80 (31%), Positives = 40/80 (50%)
Frame = +1
Query: 4 KLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEGIIGLRRAK 183
+L AAE+ + ++V KI+A C+ V IN++ I FA ++ + A
Sbjct: 260 ELEAAEKLKMKEKVDKILAHN---CN------VFINRQLIYNYPEQLFADAKVMAIEHAD 310
Query: 184 RRNMERLALACGGSAVNSVD 243
+ERLAL GG V++ D
Sbjct: 311 FEGIERLALVLGGEIVSTFD 330
>U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform a protein.
Length = 650
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 144 FCQRRYYWTTQSKKAQYGTSSPSVRGVRC*LCR 242
FC + WT + A TSS S RC CR
Sbjct: 268 FCGHLFCWTCIQEHAVAATSSASTSSARCPQCR 300
>Z78542-3|CAB01745.2| 463|Caenorhabditis elegans Hypothetical
protein F20D1.3 protein.
Length = 463
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Frame = +3
Query: 267 FAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIK------DAVRDGLRAIN 428
FAG + H G+ KF F +C +PQ + + + QI+ D +DGL N
Sbjct: 77 FAGEIPVHSPGKMKFLFALKCPSPQGGSAFVLVTEEEVYGQIRLNVSRIDLAQDGLSIAN 136
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 331 LHCSTKVNLSSPSTCS*TRPAKPKASQ*DHRQS*Q 227
LHC T +NL P T P PK + + R+ Q
Sbjct: 804 LHCDTAINLCCPLLLPLTDPKNPKKRKTERRKQKQ 838
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -3
Query: 491 RVSFDFEGRSTGYDAFIFNGVINSAEAVTNCIFDLCQ 381
R F E R TG+ F N +A TN D CQ
Sbjct: 33 RQRFKCELRITGFGYTAFGNSTNKKDAATNAAQDFCQ 69
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 310 LPLLNNARTHNLLPSSSRDPTS 375
L L N RT N+LP+ +R P+S
Sbjct: 558 LSYLKNLRTRNILPAPARSPSS 579
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 102 RYQPKRNRPLVTGCFCQ 152
R QP+ N VTGCFC+
Sbjct: 378 RNQPRCNERCVTGCFCK 394
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 102 RYQPKRNRPLVTGCFCQ 152
R QP+ N VTGCFC+
Sbjct: 169 RNQPRCNERCVTGCFCK 185
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical
protein K04G2.8b protein.
Length = 1188
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -1
Query: 520 FNSVLYFSSSVLALISKAAAPGMTHLSSMALLIARRPS--RTASLICV 383
F S++ ++ +L +S+ A THL +LLI R + ++AS CV
Sbjct: 329 FTSLVDSATGILKYVSQYLANTSTHLELRSLLITRMLTLLKSASFTCV 376
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical
protein K04G2.8a protein.
Length = 1186
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -1
Query: 520 FNSVLYFSSSVLALISKAAAPGMTHLSSMALLIARRPS--RTASLICV 383
F S++ ++ +L +S+ A THL +LLI R + ++AS CV
Sbjct: 329 FTSLVDSATGILKYVSQYLANTSTHLELRSLLITRMLTLLKSASFTCV 376
>U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical
protein R151.8 protein.
Length = 731
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 283 TNTYSEKTSLPLLNNARTHNLLPSSSRDPTS 375
T+TYSEK SL LL+NA + L ++S P++
Sbjct: 558 TSTYSEKKSL-LLSNAHKISELTATSDSPST 587
>AF143149-1|AAD37915.1| 260|Caenorhabditis elegans R151.8B protein
protein.
Length = 260
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 283 TNTYSEKTSLPLLNNARTHNLLPSSSRDPTS 375
T+TYSEK SL LL+NA + L ++S P++
Sbjct: 87 TSTYSEKKSL-LLSNAHKISELTATSDSPST 116
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -1
Query: 520 FNSVLYFSSSVLALISKAAAPGMTHLSSMALLIARRPS--RTASLICV 383
F S++ ++ +L +S+ A THL +LLI R + ++AS CV
Sbjct: 329 FTSLVDSATGILKYVSQYLANTSTHLELRSLLITRMLTLLKSASFTCV 376
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,558,916
Number of Sequences: 27780
Number of extensions: 252411
Number of successful extensions: 666
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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