Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10532
(592 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB17E12.13 |rpl1802|rpl18-2|60S ribosomal protein L18|Schizos... 109 3e-25
SPBC11C11.07 |rpl1801|rpl18-1, rpl18|60S ribosomal protein L18|S... 109 3e-25
SPBC29A10.09c |||CAF1 family ribonuclease|Schizosaccharomyces po... 31 0.095
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 28 0.89
SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr ... 28 1.2
SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces ... 27 1.5
SPAC14C4.10c |||Nudix family hydrolase|Schizosaccharomyces pombe... 27 2.0
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.0
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 26 3.6
SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein Sad1|S... 26 3.6
SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces... 26 3.6
SPAC8F11.10c |pvg1|SPACUNK4.18|pyruvyltransferase |Schizosacchar... 26 4.7
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 26 4.7
SPAC10F6.12c |mam4||protein-S isoprenylcysteine O-methyltransfer... 25 6.2
SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces ... 25 6.2
SPBC3B8.07c |dsd1|SDCB3B8.07c|dihydroceramide delta-4 desaturase... 25 8.3
SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subuni... 25 8.3
SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces p... 25 8.3
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 25 8.3
SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|... 25 8.3
>SPAPB17E12.13 |rpl1802|rpl18-2|60S ribosomal protein
L18|Schizosaccharomyces pombe|chr 1|||Manual
Length = 187
Score = 109 bits (262), Expect = 3e-25
Identities = 54/90 (60%), Positives = 66/90 (73%)
Frame = +1
Query: 250 GEVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 429
G VT+D RL +PK++VAAL T+ ARARIL AGGE+LT DQLALRAPTG TVL++G++
Sbjct: 86 GTVTDDERLLTVPKLSVAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLLRGKK 145
Query: 430 NAREAVRHFGPAPGAPRSHTKPYVRTRDMK 519
+AREA RHFG P H PYVR+ K
Sbjct: 146 HAREAYRHFG---FGPHKHKAPYVRSEGRK 172
Score = 63.3 bits (147), Expect = 3e-11
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 181
MGIDI H RK +R++ S+++ T+++FN+ +L+RLF S+ NRPP
Sbjct: 1 MGIDIERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPP 60
Query: 182 ISVSRLA--RHMKKPTREGLIAVVVG 253
IS+S++A K + EG V+VG
Sbjct: 61 ISISKIAALTSRKSASLEGKTTVIVG 86
>SPBC11C11.07 |rpl1801|rpl18-1, rpl18|60S ribosomal protein
L18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 187
Score = 109 bits (262), Expect = 3e-25
Identities = 53/90 (58%), Positives = 66/90 (73%)
Frame = +1
Query: 250 GEVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 429
G VT+D R+ +PK+++AAL T+ ARARIL AGGE+LT DQLALRAPTG TVLV+G++
Sbjct: 86 GTVTDDERMLTVPKLSIAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLVRGKK 145
Query: 430 NAREAVRHFGPAPGAPRSHTKPYVRTRDMK 519
+AREA RHFG P H PYVR+ K
Sbjct: 146 HAREAYRHFG---FGPHKHKAPYVRSEGRK 172
Score = 59.3 bits (137), Expect = 4e-10
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 181
MGIDI H +K +R++ S+++ T+++FN+ +L+RLF S+ NRPP
Sbjct: 1 MGIDIERHHVKKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPP 60
Query: 182 ISVSRLA--RHMKKPTREGLIAVVVG 253
IS+S++A K + + VVVG
Sbjct: 61 ISISKIAALTSRKSASSQNKTTVVVG 86
>SPBC29A10.09c |||CAF1 family ribonuclease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 427
Score = 31.5 bits (68), Expect = 0.095
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -2
Query: 363 KNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHVICDFPT 247
KN+ SS + TS + N+ +S+R +R +QS V +FPT
Sbjct: 170 KNWLSSELSHSTSKYLNITTSNRFIRKAIQSLVKIEFPT 208
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 28.3 bits (60), Expect = 0.89
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = -2
Query: 405 LLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHVICDFPT---TTAI 235
L+A ST S K S + F K S RYL Q IC+ P+ T++
Sbjct: 53 LVADFSTHSNPSKDNQLISPPKINHREFLNEEKESDTQTRYLKQLINICNSPSKNHETSL 112
Query: 234 KPSRVGFFMWRAKRDTEI 181
PS+ K D EI
Sbjct: 113 SPSKSTIDNNERKLDNEI 130
>SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 495
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 265 DVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQL 378
D+ Y+IP + + + TE+A+ R G+IL D +
Sbjct: 59 DLLFYEIPFLLIKHIENTEEAKLRFALPQGQILEIDTI 96
>SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 27.5 bits (58), Expect = 1.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 366 SKNFSSSSQNACTSFFGNMKSSHRH 292
SKN SS N+ TSFF ++ + +RH
Sbjct: 2 SKNSFSSMANSVTSFFQSLTTPNRH 26
>SPAC14C4.10c |||Nudix family hydrolase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 329
Score = 27.1 bits (57), Expect = 2.0
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 344 LLEEKFLLLISWLFVLRLARRQY----WYKVSEMLVRQCVTLALLQEHRAL 484
LL F+ ++ ++ LRL + WY ++++L+ +C T + RAL
Sbjct: 134 LLLSSFVFILPYMPSLRLQESEVFSAQWYPLADLLLPECQTRIQIDSSRAL 184
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 27.1 bits (57), Expect = 2.0
Identities = 22/77 (28%), Positives = 34/77 (44%)
Frame = -2
Query: 471 SWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRH 292
S S + + TS S + +S S+ S S + SSSS + +S + +SHR
Sbjct: 122 SSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTSHRT 181
Query: 291 LRYLVQSHVICDFPTTT 241
+ S+ FP TT
Sbjct: 182 TSHKSSSYRPTVFPYTT 198
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 26.2 bits (55), Expect = 3.6
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = -2
Query: 498 IGFSVRARCS-WSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKS----KNFSSSSQNA 334
+G S+ A W RA + C I L+ + + TK + KN SS++ A
Sbjct: 305 LGISLGASSGKWRRANIL-CYLIIGGCLFVFAFIYDTFTKRNAVLPPPFFKNRSSAALLA 363
Query: 333 CTSFF 319
C+SFF
Sbjct: 364 CSSFF 368
>SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein
Sad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 26.2 bits (55), Expect = 3.6
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = -2
Query: 426 LTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHVICDFPT 247
+TL+ L+ + K Q S++FSS + S N+ + + ++ +I DF
Sbjct: 176 ITLFSTLLIITLLHKGQEFYSRSFSSDNSQPSNSPVPNIPPASNDTKTSLKPDIIKDFTD 235
Query: 246 TTAIKPSRVG 217
+ PS+VG
Sbjct: 236 S----PSKVG 241
>SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 475
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -2
Query: 411 YCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHVICDFPTTTA 238
Y + +ST + + S F+ +QN+ + F N +S + + Q++ I PTT+A
Sbjct: 160 YKSIFDKSTSNSTVTSNQFNKPTQNSPFNSFSNNNNSFNNNQ---QANDIFGAPTTSA 214
>SPAC8F11.10c |pvg1|SPACUNK4.18|pyruvyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 321 FGNMKSSHRHLRYLVQSHVICDFPTTTAI 235
FG++ H+HLR L V+ DFP+ T I
Sbjct: 161 FGDLYPDHQHLREL----VVRDFPSFTTI 185
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.8 bits (54), Expect = 4.7
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -2
Query: 432 ISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHVICDF 253
IS + ++C+ + + + + F SSS + + F + SS L S+ + D+
Sbjct: 1020 ISASKSKFCVSSGNTDVAAFTQPAYFGSSSLDQSSPLFTGVLSSTAALPEWTSSYYLPDY 1079
Query: 252 -PTTTAIKPSR 223
P TA++ +R
Sbjct: 1080 PPDATAMESTR 1090
>SPAC10F6.12c |mam4||protein-S isoprenylcysteine O-methyltransferase
Mam4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 25.4 bits (53), Expect = 6.2
Identities = 26/105 (24%), Positives = 43/105 (40%)
Frame = -2
Query: 465 SRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLR 286
S AKV +CL S + + S L + SS+ F ++ +S R+
Sbjct: 95 SFAKVINCLRFPSFLINFIFSVYQTSALGFLCLGQYLRSSAMVQAGQSFSHIVASKRNKD 154
Query: 285 YLVQSHVICDFPTTTAIKPSRVGFFMWRAKRDTEIGGRLIRLIKS 151
+L+ + I + PS VGFF+W +G + L+ S
Sbjct: 155 HLLVTDGIYAYVR----HPSYVGFFIWALGTQMLLGNFVSTLLFS 195
>SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 485
Score = 25.4 bits (53), Expect = 6.2
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 404 RQYWYKVSEMLVRQCVTLALLQ--EHRAL-TLNPMFAPGT*KSKAQSS 538
+ +W VS + CV L L+ +HR++ L M P KS SS
Sbjct: 30 KSFWIAVSSSVTTACVILGTLEFRKHRSIRRLQSMIVPEAGKSIQLSS 77
>SPBC3B8.07c |dsd1|SDCB3B8.07c|dihydroceramide delta-4
desaturase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 362
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = -1
Query: 334 VHELFR*HEEQPPSSSVSCTVSRHL*LPHYHGNQTLTSWLL 212
VH+ + + E+P S + + H + +G + LT W++
Sbjct: 26 VHQFYWTYTEEPHKSRRAAILKAHPEIASLNGYEPLTKWIV 66
>SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subunit
8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +1
Query: 370 DQLALRAPTGKKTVLVQGQRNAREAVRHFGPA 465
D++ + P G K + Q ++ R A++H+ A
Sbjct: 120 DEILPKEPAGSKEAMQQKKKEKRAALKHYREA 151
>SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1033
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 404 RQYWYKVSEMLVRQCVTLALLQEHRALTLN 493
R +YK SE ++ Q + +LQ+ ALT N
Sbjct: 104 RYCYYKESEKILGQTYGMLVLQDFEALTPN 133
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 25.0 bits (52), Expect = 8.3
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 256 VTNDVRLYKI-PKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRN 432
+TNDVRL++I + + H E A L A +++ + T KT V+G
Sbjct: 702 ITNDVRLWRIVARYYLWRRHFAESLNA-TLKAYRILISSPNVTSDEATWNKT--VEGALE 758
Query: 433 AREAVRHFGPAPG 471
EA + G PG
Sbjct: 759 LVEAYANLGEMPG 771
>SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 574
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = -2
Query: 312 MKSSHRHLRYLVQSHVICDFPTTTAIKPSRVGFFMWRAKRDTEIGGRLIRL 160
+K+S HL +Q ++ + P + +++WR + E +IRL
Sbjct: 231 LKASRIHLETSIQPKLMLLTGIILLVAPILLSYYVWRRRIHFETSFNIIRL 281
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,545,611
Number of Sequences: 5004
Number of extensions: 53016
Number of successful extensions: 151
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 256184654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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