Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10531X
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    25   0.29 
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   1.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   1.5  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   4.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    20   8.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   8.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   8.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    20   8.2  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 25.0 bits (52), Expect = 0.29
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = -2

Query: 256 RATVIFGILYSLTSFVTVPTTTAIKPSRVGFF---MWRAKRDTEIGGRLIRLIKSRRR 92
           ++T I  I + +   VTV  T A+K S++  F   M R     +  G  I  ++ +RR
Sbjct: 75  KSTAILEIAFEVIFIVTVWMTGAVKHSKIAHFLNKMIRLDERFQSVGLQIDTVREKRR 132


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = -2

Query: 241 FGILYSLTSFVTVPTTTAIKPSRVGFFMWRAKRDT--EIGGRLIRLIKSRRRTI 86
           F I Y     VT+ T  A + +  G F+W  + D   E  G    L+K+  + I
Sbjct: 322 FWIGYDNEQSVTIKTEYAKEKNLAGVFIWSIETDDMHEFCGEKNGLLKAVNKAI 375


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -1

Query: 404 SHALPPEHFADLVPVLYSCQSEHEEPADQK*EFLLQQP 291
           S  + PE   +L+  L   Q+E+E P+++  + ++ QP
Sbjct: 308 SKGISPEQ-EELIHRLVYFQNEYEHPSEEDVKRIINQP 344


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +2

Query: 254 SLHVTEKARARILAAGGEILTFDQLALRAP 343
           S+H  E    RILA+ G   TF       P
Sbjct: 122 SVHFAESQSRRILASAGINKTFKSTLTGTP 151


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 268 GNMKRATVIFGILYSLTSFVTVPTTTAIKPSRV 170
           G+ KRA V+  + + L+   ++PT    +  +V
Sbjct: 156 GSWKRARVLVMLAWLLSILFSLPTVFLFEEKQV 188


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 5/27 (18%)
 Frame = -2

Query: 157 WRA-----KRDTEIGGRLIRLIKSRRR 92
           WRA     KR TEI   LI  IKSR +
Sbjct: 537 WRAFLAVLKRRTEIYKGLIDRIKSREK 563


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 262 CYRKSSSTHFGCWRRNSYF*SAGSSC 339
           CY       FG  +R S+F +  +SC
Sbjct: 150 CYSTYGIQVFGTMQRTSFFKTFLNSC 175


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 251 GSLHVTEKARARILAAGGEILTFDQLALRA 340
           GS+ +T  +  RIL +G  + TF      A
Sbjct: 240 GSIFMTTTSFYRILNSGYNLTTFGSFIFNA 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,241
Number of Sequences: 336
Number of extensions: 1940
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)