Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10530
(794 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 142 3e-34
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 140 8e-34
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 140 8e-34
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 140 8e-34
Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z66511-6|CAA91318.1| 343|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 30 2.2
Z66515-1|CAA91347.1| 218|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 28 8.9
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 142 bits (344), Expect = 3e-34
Identities = 63/89 (70%), Positives = 74/89 (83%)
Frame = +2
Query: 2 PDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYGAA 181
PDGT RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TGYGA
Sbjct: 300 PDGTSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPQAPLEKVSLLGCGISTGYGAV 359
Query: 182 LNTAKVEPGSNCAIFGLGAVGLAVVLDAK 268
LNT KVE GS A++GLGAVGLAV++ AK
Sbjct: 360 LNTCKVEEGSTVAVWGLGAVGLAVIMGAK 388
Score = 114 bits (275), Expect = 6e-26
Identities = 51/86 (59%), Positives = 68/86 (79%)
Frame = +3
Query: 483 GMGCVSDHCVAAAGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDE 662
G+ C+ VA AG+EI+TRPFQLVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DE
Sbjct: 467 GVSCIIG--VAGAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDE 524
Query: 663 FVTHNVPLKEINEAFHLMHAGKSIRA 740
F+TH + +IN AF ++ G+ +R+
Sbjct: 525 FITHRCNIDDINAAFDVLRKGEGLRS 550
Score = 108 bits (260), Expect = 4e-24
Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 LGCKAAGANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP----IQQVLVDLTDGGLEY 423
+G KAAGA +I+G+D+ KFE AK FG E +NPK + P Q LV+ DGG +Y
Sbjct: 385 MGAKAAGAKKIVGIDLIESKFEKAKMFGATECINPKSVELPEGKSFQSWLVEQFDGGFDY 444
Query: 424 TFECIGNVGTMRAALEACHKGWGVSVII 507
TFECIGNV TMR ALEA HKGWGVS II
Sbjct: 445 TFECIGNVHTMRQALEAAHKGWGVSCII 472
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 140 bits (340), Expect = 8e-34
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = +2
Query: 2 PDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYGAA 181
PDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TGYGA
Sbjct: 127 PDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAV 186
Query: 182 LNTAKVEPGSNCAIFGLGAVGLAVVLDAK 268
LNT KVE GS A++GLGAVGLAV++ AK
Sbjct: 187 LNTCKVEEGSTVAVWGLGAVGLAVIMGAK 215
Score = 120 bits (290), Expect = 9e-28
Identities = 54/88 (61%), Positives = 72/88 (81%)
Frame = +3
Query: 483 GMGCVSDHCVAAAGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDE 662
G+ C+ VA AG+EI+TRPFQLVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DE
Sbjct: 294 GVSCIIG--VAGAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDE 351
Query: 663 FVTHNVPLKEINEAFHLMHAGKSIRAVV 746
F+TH + +IN AF ++H G+S+R+V+
Sbjct: 352 FITHRWNIDDINTAFDVLHKGESLRSVL 379
Score = 107 bits (257), Expect = 9e-24
Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 LGCKAAGANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP----IQQVLVDLTDGGLEY 423
+G KAAGA +I+G+D+ KFE AK FG E +NPK + P Q LV+ DGG +Y
Sbjct: 212 MGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDGGFDY 271
Query: 424 TFECIGNVGTMRAALEACHKGWGVSVII 507
TFECIGNV TMR ALEA HKGWGVS II
Sbjct: 272 TFECIGNVHTMRQALEAAHKGWGVSCII 299
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 140 bits (340), Expect = 8e-34
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = +2
Query: 2 PDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYGAA 181
PDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TGYGA
Sbjct: 127 PDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAV 186
Query: 182 LNTAKVEPGSNCAIFGLGAVGLAVVLDAK 268
LNT KVE GS A++GLGAVGLAV++ AK
Sbjct: 187 LNTCKVEEGSTVAVWGLGAVGLAVIMGAK 215
Score = 120 bits (290), Expect = 9e-28
Identities = 54/88 (61%), Positives = 72/88 (81%)
Frame = +3
Query: 483 GMGCVSDHCVAAAGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDE 662
G+ C+ VA AG+EI+TRPFQLVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DE
Sbjct: 294 GVSCIIG--VAGAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDE 351
Query: 663 FVTHNVPLKEINEAFHLMHAGKSIRAVV 746
F+TH + +IN AF ++H G+S+R+V+
Sbjct: 352 FITHRWNIDDINTAFDVLHKGESLRSVL 379
Score = 107 bits (257), Expect = 9e-24
Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 LGCKAAGANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP----IQQVLVDLTDGGLEY 423
+G KAAGA +I+G+D+ KFE AK FG E +NPK + P Q LV+ DGG +Y
Sbjct: 212 MGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDGGFDY 271
Query: 424 TFECIGNVGTMRAALEACHKGWGVSVII 507
TFECIGNV TMR ALEA HKGWGVS II
Sbjct: 272 TFECIGNVHTMRQALEAAHKGWGVSCII 299
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 140 bits (340), Expect = 8e-34
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = +2
Query: 2 PDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYGAA 181
PDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TGYGA
Sbjct: 129 PDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAV 188
Query: 182 LNTAKVEPGSNCAIFGLGAVGLAVVLDAK 268
LNT KVE GS A++GLGAVGLAV++ AK
Sbjct: 189 LNTCKVEEGSTVAVWGLGAVGLAVIMGAK 217
Score = 120 bits (290), Expect = 9e-28
Identities = 54/88 (61%), Positives = 72/88 (81%)
Frame = +3
Query: 483 GMGCVSDHCVAAAGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDE 662
G+ C+ VA AG+EI+TRPFQLVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DE
Sbjct: 296 GVSCIIG--VAGAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDE 353
Query: 663 FVTHNVPLKEINEAFHLMHAGKSIRAVV 746
F+TH + +IN AF ++H G+S+R+V+
Sbjct: 354 FITHRWNIDDINTAFDVLHKGESLRSVL 381
Score = 107 bits (257), Expect = 9e-24
Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 LGCKAAGANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP----IQQVLVDLTDGGLEY 423
+G KAAGA +I+G+D+ KFE AK FG E +NPK + P Q LV+ DGG +Y
Sbjct: 214 MGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDGGFDY 273
Query: 424 TFECIGNVGTMRAALEACHKGWGVSVII 507
TFECIGNV TMR ALEA HKGWGVS II
Sbjct: 274 TFECIGNVHTMRQALEAAHKGWGVSCII 301
>Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical
protein ZK930.1 protein.
Length = 1354
Score = 31.5 bits (68), Expect = 0.72
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -1
Query: 701 LIDLLQRHIVSDKFV*RQLLLQVLIYKLWYTFSTFVTSKSCSLPGATCNKLEWTSADLFS 522
++ Q+H + D+ R +++ K+WY F F C G L+ + L S
Sbjct: 99 MVRAFQKHTLFDRLSTRPFVVEA--EKMWYIFLLFKALSQCETAGVCHGDLKSQNV-LIS 155
Query: 521 SSSYTMITD 495
S+++ ITD
Sbjct: 156 STNWLQITD 164
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +2
Query: 65 TFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFGLG 235
TF +Y + +I KV+ L + CG T Y +L V+PG + G G
Sbjct: 128 TFQEYLTIRDIDAIKVSNDTNLAAAAPVLCGGVTAY-KSLKATNVKPGQIVVLTGAG 183
>Z66511-6|CAA91318.1| 343|Caenorhabditis elegans Hypothetical
protein F07A11.5 protein.
Length = 343
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 304 NPDKFEVAKKFGVNEFVNPKDYDKPIQQVLVDLTD 408
N FE+A+ GV F+NP D + + +++L D
Sbjct: 179 NRRAFEIARSHGVTTFLNPAPGDPNMDKTILELVD 213
>AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical
protein D2063.1 protein.
Length = 326
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 65 TFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFGLG 235
TF +Y + ++ K+ ++ + + CG T Y AL ++V+ G A+ G G
Sbjct: 128 TFQEYATIRDVDAIKIPKSMNMAAAAPVLCGGVTAY-KALKESEVKSGQIVAVTGAG 183
>Z66515-1|CAA91347.1| 218|Caenorhabditis elegans Hypothetical
protein R53.2 protein.
Length = 218
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 609 SVPKLVDEYLEKKLPLDEFVTH 674
S+ KL+D+YL K++ +DE H
Sbjct: 59 SIGKLIDQYLRKEIDMDEHALH 80
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -3
Query: 252 TAKPTAPRPKIAQFDPGSTLAVFKAA--P*PVGTPHPSKQTLSNGAAS 115
T KP AP ++AQ LA + A P P GT P +Q + S
Sbjct: 1099 TTKPKAPPTRVAQTTRTKNLAQKRKASPPTPAGTTAPKRQYIKKSIDS 1146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,508,857
Number of Sequences: 27780
Number of extensions: 390923
Number of successful extensions: 1028
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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