Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10527
         (837 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.74 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.1  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 545 QLGINCYTKKNCQSTSSSVSPLT 477
           +LG N YT    Q TS  +SP++
Sbjct: 461 ELGTNIYTSSKRQRTSPQLSPMS 483


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 549 WGPHICKLASR 581
           W PH CKL S+
Sbjct: 493 WVPHSCKLTSK 503


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 165 EPDLPVSYLIWVFLRVPYWV 224
           EP L   YLI++F+ V +WV
Sbjct: 90  EPKLR-HYLIFIFVNVFFWV 108


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 610 KYECILMKIRHAWFILVIFIVLC 678
           K E  LMK  + WF+L   + LC
Sbjct: 128 KKESKLMKNFYFWFVLKQVMFLC 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,827
Number of Sequences: 336
Number of extensions: 4475
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)