Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10527
         (837 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK094887-1|BAC04450.1|  272|Homo sapiens protein ( Homo sapiens ...    48   4e-05
AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens ...    46   2e-04
AK127847-1|BAC87159.1|  129|Homo sapiens protein ( Homo sapiens ...    44   0.001
AK127765-1|BAC87120.1|  184|Homo sapiens protein ( Homo sapiens ...    38   0.034
AK126793-1|BAC86696.1|  188|Homo sapiens protein ( Homo sapiens ...    36   0.24 

>AK094887-1|BAC04450.1|  272|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37568 fis, clone BRCOC2002323. ).
          Length = 272

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 23/73 (31%), Positives = 39/73 (53%)
 Frame = +2

Query: 29  DLSKAFDCVEHNTLLRKLHHYGIRGVSLELIKSYLSGRIQKVDVKGTRSSGVLLNMGVPQ 208
           D  KAF+ ++H  +L+ L+  GI G  +++I++     I  + + G +  G LL  G  Q
Sbjct: 6   DAEKAFNKIKHPFMLKTLNKLGIDGTHIKIIRAIYDKPIANIILNGQKLEGFLLTTGTRQ 65

Query: 209 GSILGPFLFLVYI 247
           G  L P LF + +
Sbjct: 66  GCPLSPLLFNIVL 78


>AK127459-1|BAC86988.1|  238|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45551 fis, clone BRTHA2037247. ).
          Length = 238

 Score = 46.0 bits (104), Expect = 2e-04
 Identities = 23/80 (28%), Positives = 40/80 (50%)
 Frame = +2

Query: 8   NALGVFCDLSKAFDCVEHNTLLRKLHHYGIRGVSLELIKSYLSGRIQKVDVKGTRSSGVL 187
           N + +  D  KAF+ ++H  +L+ L+  GI G  L++I++    R   + + G +     
Sbjct: 24  NHMIISIDAEKAFNKIQHRFMLKTLNKLGIEGPCLKIIRAICDKRTANIILNGQQLEAFP 83

Query: 188 LNMGVPQGSILGPFLFLVYI 247
           L  G  QG  L P LF + +
Sbjct: 84  LKTGTRQGCPLSPLLFNIVL 103


>AK127847-1|BAC87159.1|  129|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45950 fis, clone PLACE7008136. ).
          Length = 129

 Score = 43.6 bits (98), Expect = 0.001
 Identities = 22/80 (27%), Positives = 37/80 (46%)
 Frame = +2

Query: 8   NALGVFCDLSKAFDCVEHNTLLRKLHHYGIRGVSLELIKSYLSGRIQKVDVKGTRSSGVL 187
           N + +  D  K FD ++H  +++ L   GI G  L++IK+        + + G       
Sbjct: 33  NHMIISIDARKGFDKIQHPFMMKTLSKIGIEGTYLKVIKAIYHKSTANIILNGEMLKAFP 92

Query: 188 LNMGVPQGSILGPFLFLVYI 247
           L  G  QG +L P LF + +
Sbjct: 93  LRTGTRQGCLLSPLLFSIVL 112


>AK127765-1|BAC87120.1|  184|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45866 fis, clone OCBBF3001616. ).
          Length = 184

 Score = 38.3 bits (85), Expect = 0.034
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = +2

Query: 29  DLSKAFDCVEHNTLLRKLHHYGIRGVSLELIKSYLSGRIQKVDVKGTRSSGVLLNMGVPQ 208
           D  KAF+ ++H  +++ +    I+G  L +IK+        + + G +     L +G  Q
Sbjct: 46  DAEKAFEEIQHRFMIKTVSKISIQGTYLNVIKAIYDKPTANMILNGEKLKAFPLRIGTRQ 105

Query: 209 GSILGPFLF 235
           G  L P LF
Sbjct: 106 GCPLSPLLF 114


>AK126793-1|BAC86696.1|  188|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44843 fis, clone BRACE3050270. ).
          Length = 188

 Score = 35.5 bits (78), Expect = 0.24
 Identities = 20/69 (28%), Positives = 33/69 (47%)
 Frame = +2

Query: 29  DLSKAFDCVEHNTLLRKLHHYGIRGVSLELIKSYLSGRIQKVDVKGTRSSGVLLNMGVPQ 208
           D  KAFD ++H+ +L+ L   GI G  L+++++        + + G +     L  G  Q
Sbjct: 11  DAEKAFDEIQHHFMLKILDKLGIDGTYLKIVRAIYDKPTANIILNGHKLEVFPLKTGTRQ 70

Query: 209 GSILGPFLF 235
              L P LF
Sbjct: 71  ECPLLPLLF 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,453,108
Number of Sequences: 237096
Number of extensions: 2564821
Number of successful extensions: 8410
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8410
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)