Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10526X
(423 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1245 + 25154586-25155040,25155519-25155604,25155690-25155733 36 0.018
08_02_0110 + 12650328-12650552,12650827-12651423,12651480-126518... 30 0.67
07_01_0064 + 463358-464341 29 1.2
04_01_0537 + 6970887-6971319,6971428-6971540,6971552-6972016 29 1.2
10_07_0172 + 13804803-13805293,13805423-13805537,13805766-138058... 29 2.0
05_05_0319 - 24080914-24080929,24082320-24082621,24082666-240827... 29 2.0
04_01_0548 + 7103540-7103972,7104081-7104667 28 2.7
01_06_1677 + 39092268-39092306,39092395-39092447,39094259-390943... 28 2.7
06_03_0575 + 22431744-22432212,22432473-22433077 28 3.6
07_01_0058 + 438157-438660 27 4.7
12_01_0990 + 10052430-10052895,10053633-10054219 27 6.2
08_01_0749 + 7063297-7064370 27 6.2
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 27 6.2
01_06_1797 + 39941482-39941608,39942302-39942497,39942601-399428... 27 6.2
01_05_0286 - 20403748-20403828,20404493-20404693,20404774-204049... 27 6.2
07_03_1738 - 29141829-29141989,29142112-29142343,29142751-291427... 27 8.2
04_01_0562 + 7212504-7212849,7212946-7213544 27 8.2
01_05_0693 - 24339917-24340524,24340778-24341252 27 8.2
01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858 27 8.2
>07_03_1245 + 25154586-25155040,25155519-25155604,25155690-25155733
Length = 194
Score = 35.5 bits (78), Expect = 0.018
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 88 VVMASSADTDPPRHYDLNQA--KELFESIVKEHNREYKDDADRELHYQSFKKNLAEIN 255
+V A +ADTD + +++ K FE +KEH R Y ++ Y++FKK + IN
Sbjct: 43 IVDADAADTDEDGNNAVDEPAMKAKFEDWMKEHGRIYITKKEKAHRYENFKKAMKGIN 100
>08_02_0110 +
12650328-12650552,12650827-12651423,12651480-12651857,
12651997-12652218,12652407-12652483,12652553-12652631,
12652920-12653105
Length = 587
Score = 30.3 bits (65), Expect = 0.67
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 31 LLIHCAKMNFVSVALLIATVVMASSADTDPPRH-YDLNQAK--ELFESIVKEHNREY 192
L+IHC +MN+V + V + P H Y L++ K E +++ E + Y
Sbjct: 410 LIIHCGRMNYVEAEAMKKPVAYLNPCRISKPNHTYTLDEKKLPEHIKAMTPEERKAY 466
>07_01_0064 + 463358-464341
Length = 327
Score = 29.5 bits (63), Expect = 1.2
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +1
Query: 79 IATVVMASSADTDPPRHYDLNQAKELFESIVKEHNREYKDDADRELHYQSFKKNL 243
+A V MAS A T RH + + EH R YKD A++ ++ FK N+
Sbjct: 1 MAKVTMASRAGTMEARH----------DKWMAEHGRTYKDAAEKARRFRVFKANV 45
>04_01_0537 + 6970887-6971319,6971428-6971540,6971552-6972016
Length = 336
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 160 ESIVKEHNREYKDDADRELHYQSFKKNLAEINN 258
E + ++ R YKDDA++ ++ FK N+A I +
Sbjct: 38 ERWMAQYGRMYKDDAEKARRFEVFKANVAFIES 70
>10_07_0172 +
13804803-13805293,13805423-13805537,13805766-13805831,
13805921-13806009,13806103-13806193,13806312-13806458,
13806575-13806667,13806745-13806846,13806957-13807541,
13808523-13808813,13808866-13808937
Length = 713
Score = 28.7 bits (61), Expect = 2.0
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 249 DKQLNEKSPYTTFGMNKFH---DYTPEEQQSRFGLRLPAKET*LLRLQSIGMLFQTK 410
DK+ P T G ++F D TPE+ G+ P + +RLQ + F+T+
Sbjct: 94 DKESCSSKPNATAGASRFALAGDQTPEDSPVIAGVASPKHQAAAVRLQKVYKSFRTR 150
>05_05_0319 -
24080914-24080929,24082320-24082621,24082666-24082787,
24083189-24083534
Length = 261
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 148 KELFESIVKEHNREYKDDADRELHYQSFKK 237
K F+ +KEHNR Y + ++ Y+ FK+
Sbjct: 183 KARFQDWMKEHNRSYSTEEEKARCYEIFKE 212
>04_01_0548 + 7103540-7103972,7104081-7104667
Length = 339
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 160 ESIVKEHNREYKDDADRELHYQSFKKNLAEINN 258
E + ++ R Y+DDA++ ++ FK N+A I +
Sbjct: 38 ERWMAQYGRVYRDDAEKARRFEVFKANVAFIES 70
>01_06_1677 +
39092268-39092306,39092395-39092447,39094259-39094350,
39094435-39094646,39095196-39095207
Length = 135
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 133 DLNQA-KELFESIVKEHNREYKDDADRELHYQSFKKNL 243
D QA K F+ + + NR YKD+A++ ++ FK +
Sbjct: 85 DEEQALKVRFQEWMNKFNRNYKDEAEKAYRFEVFKSTV 122
>06_03_0575 + 22431744-22432212,22432473-22433077
Length = 357
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +1
Query: 133 DLNQAKELFESIVKEHNREYKDDADRELHYQSFKKNLAEINN 258
D + +E +E +H R YKD ++ ++ F+ N I++
Sbjct: 41 DDSAMRERYEKWAADHGRTYKDSLEKARRFEVFRTNALFIDS 82
>07_01_0058 + 438157-438660
Length = 167
Score = 27.5 bits (58), Expect = 4.7
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +1
Query: 169 VKEHNREYKDDADRELHYQSFKKNL 243
+ + NREYKD+A++ ++ FK +
Sbjct: 89 MNKFNREYKDEAEKAYRFEIFKSTV 113
>12_01_0990 + 10052430-10052895,10053633-10054219
Length = 350
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 160 ESIVKEHNREYKDDADRELHYQSFKKNLAEINN 258
E + +H R YKD A++ + FK N+A I +
Sbjct: 45 ERWMAQHGRVYKDAAEKARRLEVFKANVAFIES 77
>08_01_0749 + 7063297-7064370
Length = 357
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 107 RIQILRDIMTSIKPKNCSRVSSKNITGNTRMMPTESCIINHSRKTWQR*TIEREESI 277
RI++ D+ + KP +VS +N TR T C + S + + T ERE+ +
Sbjct: 285 RIELQEDLTYAEKPVRILKVSERN----TRNRVTRFCKVQWSNHSEEEATWEREDEL 337
>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +3
Query: 204 RQRAALSIIQEKLGRDKQLNEKSPYTTFGMNKFHDYTPEEQQS 332
RQ ++ ++Q L E P +T D PE QQS
Sbjct: 1791 RQSISVPLVQSSLSSQNPPAEAEPASTLSRETARDVQPERQQS 1833
>01_06_1797 +
39941482-39941608,39942302-39942497,39942601-39942828,
39943157-39943388,39943476-39943583,39943696-39943968,
39944261-39944545
Length = 482
Score = 27.1 bits (57), Expect = 6.2
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -2
Query: 128 CLGGSVSADDAITTVAINNATLTKFIFAQCINSGTGLLVP 9
C GG+ A A+ K ++ C+ +GTG+ P
Sbjct: 10 CCGGATGPGYATPLEAMEKGPREKLLYVTCVYNGTGINKP 49
>01_05_0286 -
20403748-20403828,20404493-20404693,20404774-20404955,
20405022-20405187,20405318-20405506,20409155-20409238,
20409482-20409550,20409638-20409700,20410327-20410425,
20410882-20410983,20411237-20411341,20412259-20412372
Length = 484
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 101 HRRIQILRDIMTSIKPKNCSRVSSKNITGNTRMMPTESCIINHS 232
H +IQ L +I+ + K + +SKN N PT++ +I S
Sbjct: 246 HNQIQSLTNIIAAFKEEKTISTTSKNSKPNKPNPPTQTPVIAKS 289
>07_03_1738 -
29141829-29141989,29142112-29142343,29142751-29142792,
29143312-29143410,29143575-29143667,29143742-29143876,
29144251-29144290,29144475-29144844,29146575-29146650
Length = 415
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 124 RHYDLNQAKELFESIVKEHNREYKDDADRELHYQSFKKNLAEINN 258
RH N ++L + V E RE D D +++Y+ F K + N+
Sbjct: 107 RHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMANNS 151
>04_01_0562 + 7212504-7212849,7212946-7213544
Length = 314
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 160 ESIVKEHNREYKDDADRELHYQSFKKNLAEINN 258
E + +H R Y DDA++ + F+ N+A I +
Sbjct: 6 ERWMAKHGRAYADDAEKARRLEVFRDNVAFIES 38
>01_05_0693 - 24339917-24340524,24340778-24341252
Length = 360
Score = 26.6 bits (56), Expect = 8.2
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 67 VALLIATVVMASSADTDPPRHYDLNQAKELFESIVKEHNREYKDDADRELHYQSFKKNLA 246
+ALL+ V A++A D PR A+ E + R Y D A++ + F N
Sbjct: 15 LALLVVAVAAAAAARGDQPRRGHSMAARH--ERWMARFGRAYADAAEKARRMEVFAANAE 72
Query: 247 EIN 255
++
Sbjct: 73 RVD 75
>01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858
Length = 146
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 124 RHYDLNQAKELFESIVKEHNREYKDDADRELHYQSFKKN 240
RH N ++L + V E RE D D +++Y+ F K+
Sbjct: 107 RHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKD 145
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,527,656
Number of Sequences: 37544
Number of extensions: 188072
Number of successful extensions: 483
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 778540620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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